Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4754.t1
Gene name
Locationscaffold_10:313271..314680
Strand-
Gene length (bp)1409
Transcript length (bp)1185
Coding sequence length (bp)1185
Protein length (aa) 395

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 1.8E-01 24 59
PF00400 WD40 WD domain, G-beta repeat 2.1E-10 66 103
PF00400 WD40 WD domain, G-beta repeat 1.5E-01 109 144
PF00400 WD40 WD domain, G-beta repeat 2.1E-04 200 235
PF00400 WD40 WD domain, G-beta repeat 1.0E-03 332 364

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4754.t1
MSVILCTAGYDHTIRFWEALSGICSRTIQHPDSQVNRLCITPDKRFLAAAGHNNVKLFDIKSTNPNPVITFEGHT
SNITGVAFHCEGKWMVTSSEDGTVKVWDTRTGSLQRNYVHRAPVNDVVIHPNQGELISGDHAGMVRVWDLGESVC
THQLIPEEDTAVLSVSVASDGSLLCAGNKKGNVYLWRMVQTEETTRIIPVCTFQAHKDYLTRVLLSPDVKHLATC
SADHTAKVWNLDAEFPPAKLALQQWKENEALNPTVEAAPVEAPVTPVEVPAQSRDLLRIFDAPVQDRDLLRITDN
PPRQETPQQTFTSSPDGPPMDPVNHTLFLETTLANHQRWVWDCAFSADSAYLVTVSSDHYARLWELGTGNIIRQY
SGHHRGSVCVALNDYSEPR*
Coding >Pro_DTO377G3_2|g4754.t1
ATGAGTGTCATTCTATGCACCGCGGGGTACGACCATACCATTCGCTTTTGGGAAGCGCTCTCGGGTATCTGTTCA
CGTACAATCCAGCATCCAGACTCCCAAGTCAATCGTCTTTGCATCACCCCGGATAAGAGATTCCTGGCTGCTGCG
GGTCATAACAATGTCAAACTCTTTGACATCAAGTCAACCAATCCTAACCCCGTGATTACCTTCGAAGGTCACACA
AGCAACATCACCGGCGTGGCATTCCACTGCGAGGGAAAATGGATGGTTACCAGCTCCGAGGACGGAACTGTAAAA
GTCTGGGACACCCGTACCGGTAGCTTGCAGCGAAACTACGTTCATCGGGCTCCGGTCAATGATGTGGTCATTCAT
CCTAACCAGGGCGAGCTCATCAGCGGTGACCACGCCGGTATGGTTCGTGTCTGGGATTTGGGCGAGAGTGTCTGT
ACTCATCAATTGATTCCGGAGGAGGACACTGCGGTTCTCAGTGTCAGCGTTGCCAGTGATGGATCCTTGCTTTGC
GCTGGAAACAAGAAGGGCAACGTCTACTTGTGGCGCATGGTCCAAACTGAGGAAACCACCCGAATCATCCCCGTC
TGTACCTTCCAAGCGCATAAGGACTATCTCACTCGTGTTCTCCTCTCTCCCGATGTCAAGCATCTTGCAACTTGC
TCTGCGGATCATACTGCCAAGGTTTGGAACCTCGACGCTGAATTTCCACCTGCCAAACTGGCATTACAGCAATGG
AAGGAGAATGAGGCATTGAACCCGACAGTTGAAGCAGCACCGGTGGAAGCTCCGGTAACCCCTGTCGAGGTTCCC
GCCCAATCTCGGGATCTGCTTCGCATTTTCGACGCACCCGTCCAAGACCGTGATCTCCTCCGTATTACCGACAAC
CCTCCTCGCCAAGAGACACCGCAACAGACATTCACCTCATCCCCCGACGGGCCTCCTATGGATCCAGTCAACCAC
ACACTGTTCCTAGAGACCACCCTCGCCAATCACCAGCGCTGGGTTTGGGACTGCGCTTTCTCTGCAGACAGTGCA
TACCTCGTGACTGTCTCCAGTGATCACTACGCCCGTCTGTGGGAGCTCGGCACTGGCAACATCATCCGCCAGTAC
AGCGGCCATCATCGAGGTTCCGTTTGTGTTGCTTTAAATGACTATTCGGAGCCTCGCTAG
Transcript >Pro_DTO377G3_2|g4754.t1
ATGAGTGTCATTCTATGCACCGCGGGGTACGACCATACCATTCGCTTTTGGGAAGCGCTCTCGGGTATCTGTTCA
CGTACAATCCAGCATCCAGACTCCCAAGTCAATCGTCTTTGCATCACCCCGGATAAGAGATTCCTGGCTGCTGCG
GGTCATAACAATGTCAAACTCTTTGACATCAAGTCAACCAATCCTAACCCCGTGATTACCTTCGAAGGTCACACA
AGCAACATCACCGGCGTGGCATTCCACTGCGAGGGAAAATGGATGGTTACCAGCTCCGAGGACGGAACTGTAAAA
GTCTGGGACACCCGTACCGGTAGCTTGCAGCGAAACTACGTTCATCGGGCTCCGGTCAATGATGTGGTCATTCAT
CCTAACCAGGGCGAGCTCATCAGCGGTGACCACGCCGGTATGGTTCGTGTCTGGGATTTGGGCGAGAGTGTCTGT
ACTCATCAATTGATTCCGGAGGAGGACACTGCGGTTCTCAGTGTCAGCGTTGCCAGTGATGGATCCTTGCTTTGC
GCTGGAAACAAGAAGGGCAACGTCTACTTGTGGCGCATGGTCCAAACTGAGGAAACCACCCGAATCATCCCCGTC
TGTACCTTCCAAGCGCATAAGGACTATCTCACTCGTGTTCTCCTCTCTCCCGATGTCAAGCATCTTGCAACTTGC
TCTGCGGATCATACTGCCAAGGTTTGGAACCTCGACGCTGAATTTCCACCTGCCAAACTGGCATTACAGCAATGG
AAGGAGAATGAGGCATTGAACCCGACAGTTGAAGCAGCACCGGTGGAAGCTCCGGTAACCCCTGTCGAGGTTCCC
GCCCAATCTCGGGATCTGCTTCGCATTTTCGACGCACCCGTCCAAGACCGTGATCTCCTCCGTATTACCGACAAC
CCTCCTCGCCAAGAGACACCGCAACAGACATTCACCTCATCCCCCGACGGGCCTCCTATGGATCCAGTCAACCAC
ACACTGTTCCTAGAGACCACCCTCGCCAATCACCAGCGCTGGGTTTGGGACTGCGCTTTCTCTGCAGACAGTGCA
TACCTCGTGACTGTCTCCAGTGATCACTACGCCCGTCTGTGGGAGCTCGGCACTGGCAACATCATCCGCCAGTAC
AGCGGCCATCATCGAGGTTCCGTTTGTGTTGCTTTAAATGACTATTCGGAGCCTCGCTAG
Gene >Pro_DTO377G3_2|g4754.t1
ATGAGTGTCATTCTATGCACCGGTAAGTGGAATATCATAAGAAGCTCCCCGCATTCTTCTAGGCATTAAGCTAAT
TACCTTGGTTGCATATTTTAGCGGGGTACGACCATACCATTCGGTAAGTTGGCACTTAGTTAGCTGCGTGCAGTG
TTTATCCAGCACCCACAGAGCGATAATTCATACCGGGACTCTTGCTGACTATTTCTCTGCTAGCTTTTGGGAAGC
GCTCTCGGGTATCTGTTCACGTACAATCCAGCATCCAGACTCCCAAGTCAATCGTCTTTGCATCACCCCGGATAA
GAGATTCCTGGCTGCTGCGGGTCATAACAATGTCAAACTCTTTGACATCAAGTCAACCAATCCTAACCCCGTGAT
TACCTTCGAAGGTCACACAAGCAACATCACCGGCGTGGCATTCCACTGCGAGGGAAAATGGATGGTTACCAGCTC
CGAGGACGGAACTGTAAAAGTCTGGGACACCCGTACCGGTAGCTTGCAGCGAAACTACGTTCATCGGGCTCCGGT
CAATGATGTGGTCATTCATCCTAACCAGGGCGAGCTCATCAGCGGTGACCACGCCGGTATGGTTCGTGTCTGGGA
TTTGGGCGAGAGTGTCTGTACTCATCAATTGATTCCGGAGGAGGACACTGCGGTTCTCAGTGTCAGCGTTGCCAG
TGATGGATCCTTGCTTTGCGCTGGAAACAAGAAGGTGCGTGATTTTGTTTCACGGCAGATATTATGATTCTTTAC
TAATACCTCAACAGGGCAACGTCTACTTGTGGCGCATGGTCCAAACTGAGGAAACCACCCGAATCATCCCCGTCT
GTACCTTCCAAGCGCATAAGGACTATCTCACTCGTGTTCTCCTCTCTCCCGATGTCAAGCATCTTGCAACTTGCT
CTGCGGATCATACTGCCAAGGTTTGGAACCTCGACGCTGAATTTCCACCTGCCAAACTGGCATTACAGCAATGGA
AGGAGAATGAGGCATTGAACCCGACAGTTGAAGCAGCACCGGTGGAAGCTCCGGTAACCCCTGTCGAGGTTCCCG
CCCAATCTCGGGATCTGCTTCGCATTTTCGACGCACCCGTCCAAGACCGTGATCTCCTCCGTATTACCGACAACC
CTCCTCGCCAAGAGACACCGCAACAGACATTCACCTCATCCCCCGACGGGCCTCCTATGGATCCAGTCAACCACA
CACTGTTCCTAGAGACCACCCTCGCCAATCACCAGCGCTGGGTTTGGGACTGCGCTTTCTCTGCAGACAGTGCAT
ACCTCGTGACTGTCTCCAGTGATCACTACGCCCGTCTGTGGGAGCTCGGCACTGGCAACATCATCCGCCAGTACA
GCGGCCATCATCGAGGTTCCGTTTGTGTTGCTTTAAATGACTATTCGGAGCCTCGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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