Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g4731.t1
Gene name
Location	scaffold_10:243420..244281
Strand	+
Gene length (bp)	861
Transcript length (bp)	861
Coding sequence length (bp)	861
Protein length (aa)	287

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05721	PhyH	Phytanoyl-CoA dioxygenase (PhyH)	1.3E-26	22	217

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g4731.t1 MRSPSLPRLPVSARPEAILDIYNDYGCVIIEGLLSSSEVASMNQEIDPGLAKLAPGKNGVPLEEFLGINTKRLPL APNSRTFREVILENDLMHALSESILCDSPGEGYHINCAQVIEIGPGNAAQPLHRDQSVWPFWDLIPSPAPEACIN FFCALTPFTEANGATRVAPKTHLDVDLNNLNPPQLLPVEINPGDGFLFSGRLVHGGGENRTNEYRRGITIHIARK GLMTEEAHPLSIPREIAETMSYRGQAMFGFRSNWPIKDGPVGTYWSSNFDEIGGHLGLKSS*
Coding	>Pro_DTO377G3_2\|g4731.t1 ATGAGATCACCAAGTCTCCCGCGACTGCCAGTCTCAGCAAGACCCGAGGCCATTCTCGATATTTACAACGATTAT GGATGTGTAATTATCGAGGGGCTTCTCAGTTCATCCGAGGTTGCCTCAATGAATCAAGAGATTGATCCTGGACTG GCAAAACTTGCTCCCGGTAAAAACGGGGTGCCGTTGGAAGAGTTCCTGGGCATAAACACAAAGCGATTGCCACTG GCTCCAAATAGCCGTACTTTCCGCGAGGTGATTCTGGAGAATGATCTGATGCACGCTCTGAGTGAATCGATATTA TGTGACAGTCCTGGGGAAGGGTATCATATCAACTGTGCACAGGTGATTGAGATCGGACCCGGTAACGCGGCACAA CCACTGCATCGAGATCAAAGTGTATGGCCTTTCTGGGACCTGATTCCATCTCCAGCACCGGAGGCTTGCATCAAC TTCTTTTGCGCCTTGACCCCATTTACGGAGGCCAATGGCGCCACAAGAGTGGCCCCGAAAACGCATCTTGATGTC GACCTAAACAACTTGAATCCGCCCCAACTTCTGCCAGTTGAGATCAACCCCGGCGATGGATTTCTCTTTTCCGGC AGACTTGTTCATGGTGGGGGAGAGAACAGGACCAATGAGTACCGTCGTGGTATCACAATCCACATTGCCCGCAAG GGCCTCATGACGGAGGAAGCACATCCACTATCAATCCCTCGCGAGATTGCAGAGACCATGTCTTACAGGGGCCAG GCGATGTTCGGCTTCCGAAGCAACTGGCCGATCAAGGATGGACCCGTTGGGACCTACTGGTCCAGTAACTTTGAC GAGATTGGTGGCCATTTAGGACTAAAGTCTAGCTAG
Transcript	>Pro_DTO377G3_2\|g4731.t1 ATGAGATCACCAAGTCTCCCGCGACTGCCAGTCTCAGCAAGACCCGAGGCCATTCTCGATATTTACAACGATTAT GGATGTGTAATTATCGAGGGGCTTCTCAGTTCATCCGAGGTTGCCTCAATGAATCAAGAGATTGATCCTGGACTG GCAAAACTTGCTCCCGGTAAAAACGGGGTGCCGTTGGAAGAGTTCCTGGGCATAAACACAAAGCGATTGCCACTG GCTCCAAATAGCCGTACTTTCCGCGAGGTGATTCTGGAGAATGATCTGATGCACGCTCTGAGTGAATCGATATTA TGTGACAGTCCTGGGGAAGGGTATCATATCAACTGTGCACAGGTGATTGAGATCGGACCCGGTAACGCGGCACAA CCACTGCATCGAGATCAAAGTGTATGGCCTTTCTGGGACCTGATTCCATCTCCAGCACCGGAGGCTTGCATCAAC TTCTTTTGCGCCTTGACCCCATTTACGGAGGCCAATGGCGCCACAAGAGTGGCCCCGAAAACGCATCTTGATGTC GACCTAAACAACTTGAATCCGCCCCAACTTCTGCCAGTTGAGATCAACCCCGGCGATGGATTTCTCTTTTCCGGC AGACTTGTTCATGGTGGGGGAGAGAACAGGACCAATGAGTACCGTCGTGGTATCACAATCCACATTGCCCGCAAG GGCCTCATGACGGAGGAAGCACATCCACTATCAATCCCTCGCGAGATTGCAGAGACCATGTCTTACAGGGGCCAG GCGATGTTCGGCTTCCGAAGCAACTGGCCGATCAAGGATGGACCCGTTGGGACCTACTGGTCCAGTAACTTTGAC GAGATTGGTGGCCATTTAGGACTAAAGTCTAGCTAG
Gene	>Pro_DTO377G3_2\|g4731.t1 ATGAGATCACCAAGTCTCCCGCGACTGCCAGTCTCAGCAAGACCCGAGGCCATTCTCGATATTTACAACGATTAT GGATGTGTAATTATCGAGGGGCTTCTCAGTTCATCCGAGGTTGCCTCAATGAATCAAGAGATTGATCCTGGACTG GCAAAACTTGCTCCCGGTAAAAACGGGGTGCCGTTGGAAGAGTTCCTGGGCATAAACACAAAGCGATTGCCACTG GCTCCAAATAGCCGTACTTTCCGCGAGGTGATTCTGGAGAATGATCTGATGCACGCTCTGAGTGAATCGATATTA TGTGACAGTCCTGGGGAAGGGTATCATATCAACTGTGCACAGGTGATTGAGATCGGACCCGGTAACGCGGCACAA CCACTGCATCGAGATCAAAGTGTATGGCCTTTCTGGGACCTGATTCCATCTCCAGCACCGGAGGCTTGCATCAAC TTCTTTTGCGCCTTGACCCCATTTACGGAGGCCAATGGCGCCACAAGAGTGGCCCCGAAAACGCATCTTGATGTC GACCTAAACAACTTGAATCCGCCCCAACTTCTGCCAGTTGAGATCAACCCCGGCGATGGATTTCTCTTTTCCGGC AGACTTGTTCATGGTGGGGGAGAGAACAGGACCAATGAGTACCGTCGTGGTATCACAATCCACATTGCCCGCAAG GGCCTCATGACGGAGGAAGCACATCCACTATCAATCCCTCGCGAGATTGCAGAGACCATGTCTTACAGGGGCCAG GCGATGTTCGGCTTCCGAAGCAACTGGCCGATCAAGGATGGACCCGTTGGGACCTACTGGTCCAGTAACTTTGAC GAGATTGGTGGCCATTTAGGACTAAAGTCTAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail