Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4705.t1
Gene name
Locationscaffold_10:186844..188052
Strand+
Gene length (bp)1208
Transcript length (bp)1158
Coding sequence length (bp)1158
Protein length (aa) 386

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00266 Aminotran_5 Aminotransferase class-V 5.8E-28 13 342

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4705.t1
MSIQTPHNTLLIPGPIEFDDAVLQSMSHYAESHVAPGFVKVFGETLTLVRKVFQSTNPAAQPFIIAGSGTLGWDL
VSANLIERGENALVLNTGYFGDSFGQCLETYGANVTHLKAPIGDRSSLEEVEQALKEKSYKVITLTHVDTSTGVL
SDVKGVAQLVRRVSPETLVVVDGVCSVGSEEIAFDEWDLDAVLTASQKAIGCPPGLSIVMTSGRAIQAAQSRKTP
PSSYYASIANWLPIMKNYENNKASYFATPPTQLVHALHTTLTQITVDVPARFAIHAKVSDKVKAAVAELGLKQVA
SRPECQAHGMTAIYLPEGLVPADVLPGLLKRGVIFAAGLHKEIATKYIRFGHMGVSVTDPKRGDIDNALTALKEA
LTEAKQAKGL*
Coding >Pro_DTO377G3_2|g4705.t1
ATGTCTATTCAAACCCCTCACAACACCCTCCTGATCCCAGGACCCATCGAATTCGACGATGCCGTCCTCCAGTCT
ATGTCCCACTATGCTGAGAGCCACGTCGCCCCCGGCTTCGTCAAGGTCTTCGGCGAGACCCTAACTCTCGTCCGC
AAGGTCTTCCAATCTACCAACCCCGCCGCGCAGCCCTTCATCATCGCCGGAAGCGGCACACTGGGCTGGGATCTT
GTCTCCGCCAACCTGATCGAGCGCGGGGAGAACGCCCTCGTTCTTAACACCGGATACTTCGGCGACTCCTTCGGC
CAGTGCCTCGAGACATATGGTGCTAACGTCACCCACCTTAAGGCACCCATCGGCGATCGCTCTTCGCTCGAGGAA
GTGGAGCAAGCTCTCAAGGAGAAGTCGTACAAGGTCATCACCCTCACACACGTCGACACCTCAACCGGCGTCCTT
TCTGACGTTAAGGGCGTGGCACAATTGGTGCGCCGCGTCAGCCCAGAAACCCTCGTGGTCGTGGACGGCGTGTGT
AGTGTCGGCTCGGAGGAGATCGCCTTCGACGAGTGGGATCTCGATGCCGTCCTTACAGCTTCGCAAAAGGCCATC
GGCTGCCCACCCGGTCTCAGCATCGTCATGACATCTGGACGCGCCATCCAGGCCGCCCAGTCGCGCAAGACCCCG
CCCAGTTCTTACTACGCCTCTATCGCCAACTGGCTCCCTATCATGAAGAACTACGAGAACAACAAGGCCTCTTAC
TTCGCTACCCCACCCACCCAGCTCGTCCACGCCCTCCACACCACCCTCACCCAGATCACCGTTGATGTCCCCGCC
CGCTTCGCTATCCACGCCAAGGTCTCGGATAAGGTCAAGGCTGCTGTTGCCGAGCTTGGTCTGAAGCAGGTCGCT
TCCCGCCCTGAATGCCAGGCTCATGGCATGACTGCCATTTACTTGCCTGAGGGTCTGGTTCCGGCTGATGTCCTG
CCTGGACTGCTTAAGCGGGGTGTCATCTTTGCAGCTGGCCTGCACAAGGAGATTGCTACTAAGTACATCCGGTTC
GGCCACATGGGTGTCAGTGTCACTGATCCCAAGCGTGGTGACATTGACAATGCCCTGACGGCGCTCAAGGAGGCT
CTAACCGAGGCCAAGCAGGCTAAGGGTCTGTAA
Transcript >Pro_DTO377G3_2|g4705.t1
ATGTCTATTCAAACCCCTCACAACACCCTCCTGATCCCAGGACCCATCGAATTCGACGATGCCGTCCTCCAGTCT
ATGTCCCACTATGCTGAGAGCCACGTCGCCCCCGGCTTCGTCAAGGTCTTCGGCGAGACCCTAACTCTCGTCCGC
AAGGTCTTCCAATCTACCAACCCCGCCGCGCAGCCCTTCATCATCGCCGGAAGCGGCACACTGGGCTGGGATCTT
GTCTCCGCCAACCTGATCGAGCGCGGGGAGAACGCCCTCGTTCTTAACACCGGATACTTCGGCGACTCCTTCGGC
CAGTGCCTCGAGACATATGGTGCTAACGTCACCCACCTTAAGGCACCCATCGGCGATCGCTCTTCGCTCGAGGAA
GTGGAGCAAGCTCTCAAGGAGAAGTCGTACAAGGTCATCACCCTCACACACGTCGACACCTCAACCGGCGTCCTT
TCTGACGTTAAGGGCGTGGCACAATTGGTGCGCCGCGTCAGCCCAGAAACCCTCGTGGTCGTGGACGGCGTGTGT
AGTGTCGGCTCGGAGGAGATCGCCTTCGACGAGTGGGATCTCGATGCCGTCCTTACAGCTTCGCAAAAGGCCATC
GGCTGCCCACCCGGTCTCAGCATCGTCATGACATCTGGACGCGCCATCCAGGCCGCCCAGTCGCGCAAGACCCCG
CCCAGTTCTTACTACGCCTCTATCGCCAACTGGCTCCCTATCATGAAGAACTACGAGAACAACAAGGCCTCTTAC
TTCGCTACCCCACCCACCCAGCTCGTCCACGCCCTCCACACCACCCTCACCCAGATCACCGTTGATGTCCCCGCC
CGCTTCGCTATCCACGCCAAGGTCTCGGATAAGGTCAAGGCTGCTGTTGCCGAGCTTGGTCTGAAGCAGGTCGCT
TCCCGCCCTGAATGCCAGGCTCATGGCATGACTGCCATTTACTTGCCTGAGGGTCTGGTTCCGGCTGATGTCCTG
CCTGGACTGCTTAAGCGGGGTGTCATCTTTGCAGCTGGCCTGCACAAGGAGATTGCTACTAAGTACATCCGGTTC
GGCCACATGGGTGTCAGTGTCACTGATCCCAAGCGTGGTGACATTGACAATGCCCTGACGGCGCTCAAGGAGGCT
CTAACCGAGGCCAAGCAGGCTAAGGGTCTGTAA
Gene >Pro_DTO377G3_2|g4705.t1
ATGTCTATTCAAACCCCTCACAACACCCTCCTGATCCCAGGACCCATCGAATTCGACGATGCCGTCCTCCAGTCT
ATGTCCCACTATGCGTGAGTCACAATATACTATGCTACAATATACAACCAACTAACTCTCCCAGTGAGAGCCACG
TCGCCCCCGGCTTCGTCAAGGTCTTCGGCGAGACCCTAACTCTCGTCCGCAAGGTCTTCCAATCTACCAACCCCG
CCGCGCAGCCCTTCATCATCGCCGGAAGCGGCACACTGGGCTGGGATCTTGTCTCCGCCAACCTGATCGAGCGCG
GGGAGAACGCCCTCGTTCTTAACACCGGATACTTCGGCGACTCCTTCGGCCAGTGCCTCGAGACATATGGTGCTA
ACGTCACCCACCTTAAGGCACCCATCGGCGATCGCTCTTCGCTCGAGGAAGTGGAGCAAGCTCTCAAGGAGAAGT
CGTACAAGGTCATCACCCTCACACACGTCGACACCTCAACCGGCGTCCTTTCTGACGTTAAGGGCGTGGCACAAT
TGGTGCGCCGCGTCAGCCCAGAAACCCTCGTGGTCGTGGACGGCGTGTGTAGTGTCGGCTCGGAGGAGATCGCCT
TCGACGAGTGGGATCTCGATGCCGTCCTTACAGCTTCGCAAAAGGCCATCGGCTGCCCACCCGGTCTCAGCATCG
TCATGACATCTGGACGCGCCATCCAGGCCGCCCAGTCGCGCAAGACCCCGCCCAGTTCTTACTACGCCTCTATCG
CCAACTGGCTCCCTATCATGAAGAACTACGAGAACAACAAGGCCTCTTACTTCGCTACCCCACCCACCCAGCTCG
TCCACGCCCTCCACACCACCCTCACCCAGATCACCGTTGATGTCCCCGCCCGCTTCGCTATCCACGCCAAGGTCT
CGGATAAGGTCAAGGCTGCTGTTGCCGAGCTTGGTCTGAAGCAGGTCGCTTCCCGCCCTGAATGCCAGGCTCATG
GCATGACTGCCATTTACTTGCCTGAGGGTCTGGTTCCGGCTGATGTCCTGCCTGGACTGCTTAAGCGGGGTGTCA
TCTTTGCAGCTGGCCTGCACAAGGAGATTGCTACTAAGTACATCCGGTTCGGCCACATGGGTGTCAGTGTCACTG
ATCCCAAGCGTGGTGACATTGACAATGCCCTGACGGCGCTCAAGGAGGCTCTAACCGAGGCCAAGCAGGCTAAGG
GTCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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