Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4691.t1
Gene name
Locationscaffold_10:153097..155006
Strand-
Gene length (bp)1909
Transcript length (bp)1455
Coding sequence length (bp)1455
Protein length (aa) 485

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01008 IF-2B Initiation factor 2 subunit family 5.8E-23 89 314
PF01008 IF-2B Initiation factor 2 subunit family 4.8E-38 335 466

GO

GO Term Description Terminal node
GO:0044237 cellular metabolic process Yes
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4691.t1
MRQVTQNHSLSLPLSGSSCENLRISCSSFYLHTRCDLDLKLDFLPTSHFLMPSSSLALTPGLGSFLKCLKTNPID
TSIETLISLLKRRQIRHSRSCATATAYLLRSVISACRTTDSAKLIERVQSVGRRLMAAQPREMVVGNIVRRVLGL
IRDEAEDDRDAEFALSDIGSESQPQTPRAYDDPSLPLDRDSPSFRSDERSSRPPLTSMFSLLSHPEPEHSLPSTP
GSSSPNGRLPGHGPSKDVRAEVLEGIGEIIDELGQVDDQIAAYALDHIHSNEIILTHTSSTTVQKFLLKAAAKRK
FTVIHAESYPNNHEDTHATVSGSAVTDDDNIGLEAFQKPLIEHGITVILIPDSAVFALMSRVNKVILGTHSVLAN
GGLVAAAGTRVIARAAKVHQTPVVVVSGVYKLSPVYPFDFDSLIEYGDPSKVLPYEEGDLVDLIDVQNPIYDYVP
AELVDLYITNLGGHAPSYLYRIVSDHYRKEDISF*
Coding >Pro_DTO377G3_2|g4691.t1
ATGCGCCAAGTCACCCAAAATCATTCTTTGTCTCTCCCACTCTCTGGCTCTTCGTGTGAGAATCTGAGAATCTCT
TGCTCATCGTTCTATTTACATACTCGGTGTGATCTGGATCTGAAACTTGATTTCCTCCCAACATCCCACTTCCTC
ATGCCGTCTTCCTCGTTGGCCCTGACGCCGGGCCTGGGGTCATTCCTCAAGTGCCTCAAGACAAACCCGATTGAT
ACCTCTATTGAGACTCTGATTTCATTGCTCAAGCGACGTCAAATCCGCCATTCGCGATCATGTGCTACAGCAACC
GCCTATTTGCTACGAAGCGTTATCTCTGCATGCCGCACAACAGATTCAGCAAAGCTTATTGAGCGGGTGCAGAGT
GTGGGTAGGCGACTAATGGCTGCGCAACCGCGCGAGATGGTTGTGGGCAATATCGTGCGCCGGGTCCTAGGTCTT
ATTCGCGACGAAGCGGAAGACGATCGCGACGCTGAGTTCGCCCTTAGCGATATTGGCTCAGAGAGTCAGCCCCAA
ACACCCCGGGCTTATGACGATCCATCATTGCCTTTGGATCGCGACTCGCCCTCCTTCCGGTCCGATGAAAGATCC
TCTCGCCCCCCTCTGACCTCTATGTTCAGCCTTCTGTCCCATCCCGAACCCGAGCACTCACTTCCCAGCACCCCG
GGATCCTCCTCTCCAAACGGACGCCTCCCTGGCCACGGTCCAAGCAAAGACGTACGAGCTGAGGTGCTGGAGGGT
ATTGGCGAGATCATTGATGAGCTCGGCCAGGTCGACGATCAGATCGCCGCTTATGCACTGGACCACATTCACTCT
AACGAAATCATCCTCACCCACACATCCTCGACCACTGTCCAAAAATTCCTGCTTAAGGCCGCCGCGAAGCGCAAG
TTTACCGTCATCCATGCCGAGTCGTATCCGAATAACCATGAGGACACACACGCCACTGTCAGCGGTAGCGCTGTC
ACTGACGATGACAACATCGGCTTGGAGGCTTTCCAGAAGCCACTGATCGAGCACGGCATCACCGTCATCCTCATC
CCAGACTCTGCCGTCTTCGCTCTCATGTCACGAGTCAACAAGGTCATTCTCGGAACACACTCCGTCCTCGCCAAC
GGCGGCCTTGTCGCCGCGGCTGGCACCCGTGTCATCGCGCGTGCCGCCAAGGTTCACCAGACCCCCGTCGTGGTC
GTGAGCGGTGTTTACAAGCTCAGCCCAGTCTACCCATTCGACTTCGACTCACTCATTGAATACGGTGACCCGAGC
AAGGTCCTCCCATACGAGGAAGGTGATCTCGTCGACCTAATCGATGTCCAAAACCCCATCTATGACTACGTTCCC
GCAGAGCTCGTCGATCTTTACATTACTAACCTCGGCGGCCATGCTCCATCATACCTGTACCGCATTGTCTCAGAC
CACTACCGCAAAGAAGATATCAGCTTCTAA
Transcript >Pro_DTO377G3_2|g4691.t1
ATGCGCCAAGTCACCCAAAATCATTCTTTGTCTCTCCCACTCTCTGGCTCTTCGTGTGAGAATCTGAGAATCTCT
TGCTCATCGTTCTATTTACATACTCGGTGTGATCTGGATCTGAAACTTGATTTCCTCCCAACATCCCACTTCCTC
ATGCCGTCTTCCTCGTTGGCCCTGACGCCGGGCCTGGGGTCATTCCTCAAGTGCCTCAAGACAAACCCGATTGAT
ACCTCTATTGAGACTCTGATTTCATTGCTCAAGCGACGTCAAATCCGCCATTCGCGATCATGTGCTACAGCAACC
GCCTATTTGCTACGAAGCGTTATCTCTGCATGCCGCACAACAGATTCAGCAAAGCTTATTGAGCGGGTGCAGAGT
GTGGGTAGGCGACTAATGGCTGCGCAACCGCGCGAGATGGTTGTGGGCAATATCGTGCGCCGGGTCCTAGGTCTT
ATTCGCGACGAAGCGGAAGACGATCGCGACGCTGAGTTCGCCCTTAGCGATATTGGCTCAGAGAGTCAGCCCCAA
ACACCCCGGGCTTATGACGATCCATCATTGCCTTTGGATCGCGACTCGCCCTCCTTCCGGTCCGATGAAAGATCC
TCTCGCCCCCCTCTGACCTCTATGTTCAGCCTTCTGTCCCATCCCGAACCCGAGCACTCACTTCCCAGCACCCCG
GGATCCTCCTCTCCAAACGGACGCCTCCCTGGCCACGGTCCAAGCAAAGACGTACGAGCTGAGGTGCTGGAGGGT
ATTGGCGAGATCATTGATGAGCTCGGCCAGGTCGACGATCAGATCGCCGCTTATGCACTGGACCACATTCACTCT
AACGAAATCATCCTCACCCACACATCCTCGACCACTGTCCAAAAATTCCTGCTTAAGGCCGCCGCGAAGCGCAAG
TTTACCGTCATCCATGCCGAGTCGTATCCGAATAACCATGAGGACACACACGCCACTGTCAGCGGTAGCGCTGTC
ACTGACGATGACAACATCGGCTTGGAGGCTTTCCAGAAGCCACTGATCGAGCACGGCATCACCGTCATCCTCATC
CCAGACTCTGCCGTCTTCGCTCTCATGTCACGAGTCAACAAGGTCATTCTCGGAACACACTCCGTCCTCGCCAAC
GGCGGCCTTGTCGCCGCGGCTGGCACCCGTGTCATCGCGCGTGCCGCCAAGGTTCACCAGACCCCCGTCGTGGTC
GTGAGCGGTGTTTACAAGCTCAGCCCAGTCTACCCATTCGACTTCGACTCACTCATTGAATACGGTGACCCGAGC
AAGGTCCTCCCATACGAGGAAGGTGATCTCGTCGACCTAATCGATGTCCAAAACCCCATCTATGACTACGTTCCC
GCAGAGCTCGTCGATCTTTACATTACTAACCTCGGCGGCCATGCTCCATCATACCTGTACCGCATTGTCTCAGAC
CACTACCGCAAAGAAGATATCAGCTTCTAA
Gene >Pro_DTO377G3_2|g4691.t1
ATGCGCCAAGTCACCCGTGCCTCGGAAGTACTTCCGCAACTCCAATCTGATTTTATACCACGAGTTTCAAAGCCG
ACAAAAAGCAATCCAAAAACAGAAATGAAATAATTGAAATCCAAAAACTGGCAAAACACCAATAAGAAAGCCGAA
GCCGAGACAATAGAGCGAGGATCAATGAGTGTGGGGAAGCGGACAAGATCGAACGGCAGAAAATCATTCTTTGTC
TCTCCCACTCTCTGGCTCTTCGTGTGAGAATCTGAGAATCTCTTGCTCATCGTTCTATTTACATACTCGGTGTGA
TCTGGATCTGAAACTTGGTATGTCTATTACCCGACACTGCATACTCCTGTCGCCGAACCCCCGCTGACACCGCGT
AGATTTCCTCCCAACATCCCACTTCCTCATGCCGTCTTCCTCGTTGGCCCTGACGCCGGGCCTGGGGTCATTCCT
CAAGTGCCTCAAGACAAACCCGATTGATACCTCTATTGAGACTCTGATTTCGTACGTATTTCCAGACTCCTTGTC
ATGACGGCTACTCTTACCGACGATCAAACTCGCTAACATAGTATATTTCAATCAGATTGCTCAAGCGACGTCAAA
TCCGCCATTCGCGATCATGTGCTACAGCAACCGCCTATTTGCTACGAAGCGTTATCTCTGCATGCCGCACAACAG
ATTCAGCAAAGCTTATTGAGCGGGTGCAGAGTGTGGGTAGGCGACTAATGGCTGCGCAACCGCGCGAGATGGTTG
TGGGCAATATCGTGCGCCGGGTCCTAGGTCTTATTCGCGACGAAGCGGAAGACGATCGCGACGCTGAGTTCGCCC
TTAGCGATATTGGCTCAGAGAGTCAGCCCCAAACACCCCGGGCTTATGACGGTGGGTCCCAAGTTTTGGTCCAAA
TATCAACGCAGTGACTCATAGATTCATAGATCCATCATTGCCTTTGGATCGCGACTCGCCCTCCTTCCGGTCCGA
TGAAAGATCCTCTCGCCCCCCTCTGACCTCTATGTTCAGCCTTCTGTCCCATCCCGAACCCGAGCACTCACTTCC
CAGCACCCCGGGATCCTCCTCTCCAAACGGACGCCTCCCTGGCCACGGTCCAAGCAAAGACGTACGAGCTGAGGT
GCTGGAGGGTATTGGCGAGATCATTGATGAGCTCGGCCAGGTCGACGATCAGATCGCCGCTTATGCACTGGACCA
CATTCACTCTAACGAAATCATCCTCACCCACACATCCTCGACCACTGTCCAAAAATTCCTGCTTAAGGCCGCCGC
GAAGCGCAAGTTTACCGTCATCCATGCCGAGTCGTATCCGAATAACCATGAGGACACACACGCCACTGTCAGCGG
TAGCGCTGTCACTGACGATGACAACATCGGCTTGGAGGCTTTCCAGAAGCCACTGATCGAGCACGGCATCACCGT
CATCCTCATCCCAGACTCTGCCGTCTTCGCTCTCATGTCACGAGTCAACAAGGTCATTCTCGGAACACACTCCGT
CCTCGCCAACGGCGGCCTTGTCGCCGCGGCTGGCACCCGTGTCATCGCGCGTGCCGCCAAGGTTCACCAGACCCC
CGTCGTGGTCGTGAGCGGTGTTTACAAGCTCAGCCCAGTCTACCCATTCGACTTCGACTCACTCATTGAATACGG
TGACCCGAGCAAGGTCCTCCCATACGAGGAAGGTGATCTCGTCGACCTAATCGATGTCCAAAACCCCATCTATGA
CTACGTTCCCGCAGAGCTCGTCGATCTTTACATTACTAACCTGTAAGTTTCAAGCACCCATCCCACACGCTTATC
TCATTCCATAAAGCTAACCTTGTTTTCCTACCCCAGCGGCGGCCATGCTCCATCATACCTGTACCGCATTGTCTC
AGACCACTACCGCAAAGAAGATATCAGCTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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