Protein ID | Pro_DTO377G3_2|g4685.t1 |
Gene name | |
Location | scaffold_10:142738..145313 |
Strand | + |
Gene length (bp) | 2575 |
Transcript length (bp) | 2520 |
Coding sequence length (bp) | 2520 |
Protein length (aa) | 840 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12752 | SUZ | SUZ domain | 4.0E-16 | 350 | 427 |
PF01424 | R3H | R3H domain | 1.7E-06 | 269 | 313 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003676 | nucleic acid binding | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4685.t1 MASKSPPGGDGPLSFAKIAAMPAPLSPHSSSVSDENEICEPADQSLYSKANGSGASLPSQHNVDKTPEASSIELA VDDLGRGVQDISITSENHSDGPSSFVSGQDDGLLKRENSFEDDRTHLSTSSTKMTNFDSKSLASVTTFAMDEKDS VRPDDSASVQAIDEEESLSGLASGAPNSVAGSEAGSRAFRDHYRDGIPTRPRGILPVPPLFGGPQPVNGAIPPDS IANNFVIPANSDGIEDGQILHGFPLEPDEKLLEAMKSPKDRLLILQLEEKIRHFIKDCNEQSLELPPSNAFGRLL AHKLGDYYHLTHFVDNNVTSVRLHRTPFCRLPTPLSAVHAASNSTPPPAVPAMKIMRRNDGGQFEGSIGGSSNPS KTNSEDGDSGPDGERHWSSSGATHAKDRMALTREEREAKYHEVRERIFRDFPDSAKSDPASGDSNPNMSRSSSAN GRKKNQRQRTPHDDSFEVRSQFNAYYPGMQYGNGAAQYNAPVNDSSYPNQVPYLVGPGVPPPSGGYMPSSRNGAI YPGQLNMNVNVNGSQFPVAMSPQMASNSSWQGGNMPQQSPYSGYATMNQQGMMNQPSSNASSPAMNNYAVPNVTP YQQNPNWNSPPFPTNFQQSQHPRNGPPVHWPNYPHQPMASNMPLNMPLNMNSNMGSNMGLNMSSNMPSNMGAYPY AQYPGQHMNPALQNSAGSHAAMQAGYARSHFNPQTRSFIPGGAPLGRHPNKSQHPMQPYGTMQPGAQQQWHGYPE PSSNRTMDSTPAMNSNRVPTGPRDSIAKWGTPSHLPPKPPPSEVPSDFDLKSRTVPASVPAPTYSNNGISAVSNG PLVVSGGTTVSKPN* |
Coding | >Pro_DTO377G3_2|g4685.t1 ATGGCGTCAAAAAGTCCCCCAGGTGGAGACGGCCCTCTCTCCTTTGCAAAGATCGCCGCTATGCCCGCCCCCCTC AGCCCACATTCTTCCTCGGTATCTGATGAAAACGAAATATGCGAGCCAGCAGACCAATCACTTTACTCAAAAGCA AATGGCTCCGGTGCATCTTTGCCCAGCCAGCATAATGTCGATAAAACGCCAGAGGCTAGTTCCATAGAACTAGCT GTTGATGATCTAGGGAGAGGTGTGCAAGACATTAGCATCACCTCGGAAAATCACAGTGATGGACCAAGCTCGTTT GTTAGCGGCCAAGATGATGGCTTGCTCAAGCGGGAAAACTCTTTTGAAGATGATCGCACTCACCTTTCTACCTCA TCCACAAAAATGACCAACTTTGATTCCAAGAGTCTTGCCTCGGTGACGACCTTTGCAATGGATGAAAAGGACTCT GTACGTCCCGATGATAGTGCTAGTGTGCAAGCGATTGATGAAGAGGAGTCGCTTTCCGGACTTGCTTCTGGGGCT CCAAACTCAGTGGCAGGCTCTGAAGCTGGCAGTCGTGCGTTTCGGGATCATTACCGAGATGGCATTCCTACACGC CCACGCGGAATTTTGCCCGTGCCTCCTCTCTTTGGCGGTCCCCAGCCGGTGAATGGTGCAATTCCTCCAGATTCA ATCGCGAATAATTTCGTGATTCCAGCCAACTCCGATGGCATTGAAGATGGTCAGATATTACATGGGTTTCCCTTG GAGCCGGATGAAAAACTCCTAGAGGCAATGAAATCACCGAAAGATCGGCTGCTGATCCTGCAATTGGAGGAAAAA ATTCGACACTTTATCAAGGACTGCAATGAGCAGTCTCTAGAGTTGCCCCCCTCGAACGCGTTTGGGCGACTTCTT GCACACAAGCTAGGAGATTACTATCACTTAACACATTTTGTCGATAACAATGTGACATCGGTCAGGCTTCATCGC ACGCCATTCTGCCGGCTACCCACTCCTTTGTCCGCTGTGCATGCTGCTTCCAATAGCACTCCACCTCCAGCTGTC CCGGCAATGAAAATCATGCGCCGAAACGATGGAGGGCAATTCGAAGGAAGTATTGGAGGTTCTTCAAACCCTTCC AAGACCAACTCGGAAGATGGCGATAGCGGACCAGATGGAGAACGTCACTGGTCTTCTTCTGGTGCTACACACGCT AAAGATCGTATGGCTTTGACGAGGGAGGAACGGGAGGCAAAATACCATGAAGTACGTGAACGAATCTTTCGTGAT TTTCCCGACAGTGCCAAATCAGATCCGGCCAGCGGTGACTCGAATCCCAACATGTCACGCTCCAGCTCGGCGAAT GGGCGCAAAAAAAACCAGAGGCAGCGAACTCCTCATGATGACAGCTTTGAGGTTCGCTCGCAGTTCAATGCCTAC TACCCAGGTATGCAATATGGAAATGGTGCTGCTCAGTACAATGCTCCTGTAAATGACAGCTCATATCCAAACCAA GTACCTTACTTGGTGGGACCTGGCGTGCCGCCACCCTCTGGTGGATACATGCCATCTAGTCGGAATGGTGCCATT TACCCTGGGCAACTGAACATGAATGTGAATGTGAATGGCTCCCAGTTTCCAGTGGCAATGTCGCCTCAGATGGCC TCCAATAGCTCGTGGCAAGGAGGAAACATGCCGCAACAATCTCCATATTCCGGGTATGCTACGATGAACCAGCAG GGGATGATGAACCAGCCGTCCTCAAACGCTTCCTCGCCGGCAATGAACAACTATGCCGTGCCCAATGTGACCCCG TATCAACAAAACCCCAATTGGAACTCGCCTCCTTTCCCCACAAATTTCCAGCAGTCCCAGCACCCACGAAATGGA CCGCCTGTTCACTGGCCCAACTATCCTCATCAGCCAATGGCTTCTAACATGCCACTCAACATGCCGCTTAACATG AACTCAAACATGGGCTCCAACATGGGTCTTAATATGAGCTCCAATATGCCGTCCAATATGGGCGCATATCCTTAC GCTCAATACCCCGGGCAGCATATGAATCCTGCTCTCCAAAATTCTGCCGGATCCCACGCAGCAATGCAAGCAGGA TATGCCAGGTCACACTTCAACCCTCAGACACGCTCATTCATCCCCGGCGGTGCTCCTCTCGGGCGTCACCCGAAC AAAAGCCAACACCCAATGCAGCCGTATGGTACCATGCAACCTGGCGCCCAACAGCAATGGCATGGGTATCCGGAA CCAAGTTCCAACCGGACTATGGACTCAACCCCGGCTATGAATTCCAACCGAGTGCCCACCGGTCCTCGAGACTCG ATCGCGAAATGGGGCACACCATCTCATCTTCCCCCCAAACCCCCGCCTTCCGAAGTCCCTTCCGACTTTGATCTA AAAAGCCGAACCGTCCCGGCCTCGGTCCCAGCACCAACATACAGCAACAATGGAATTTCCGCCGTCAGCAATGGA CCACTTGTGGTCTCTGGGGGCACAACTGTCTCCAAGCCGAACTAA |
Transcript | >Pro_DTO377G3_2|g4685.t1 ATGGCGTCAAAAAGTCCCCCAGGTGGAGACGGCCCTCTCTCCTTTGCAAAGATCGCCGCTATGCCCGCCCCCCTC AGCCCACATTCTTCCTCGGTATCTGATGAAAACGAAATATGCGAGCCAGCAGACCAATCACTTTACTCAAAAGCA AATGGCTCCGGTGCATCTTTGCCCAGCCAGCATAATGTCGATAAAACGCCAGAGGCTAGTTCCATAGAACTAGCT GTTGATGATCTAGGGAGAGGTGTGCAAGACATTAGCATCACCTCGGAAAATCACAGTGATGGACCAAGCTCGTTT GTTAGCGGCCAAGATGATGGCTTGCTCAAGCGGGAAAACTCTTTTGAAGATGATCGCACTCACCTTTCTACCTCA TCCACAAAAATGACCAACTTTGATTCCAAGAGTCTTGCCTCGGTGACGACCTTTGCAATGGATGAAAAGGACTCT GTACGTCCCGATGATAGTGCTAGTGTGCAAGCGATTGATGAAGAGGAGTCGCTTTCCGGACTTGCTTCTGGGGCT CCAAACTCAGTGGCAGGCTCTGAAGCTGGCAGTCGTGCGTTTCGGGATCATTACCGAGATGGCATTCCTACACGC CCACGCGGAATTTTGCCCGTGCCTCCTCTCTTTGGCGGTCCCCAGCCGGTGAATGGTGCAATTCCTCCAGATTCA ATCGCGAATAATTTCGTGATTCCAGCCAACTCCGATGGCATTGAAGATGGTCAGATATTACATGGGTTTCCCTTG GAGCCGGATGAAAAACTCCTAGAGGCAATGAAATCACCGAAAGATCGGCTGCTGATCCTGCAATTGGAGGAAAAA ATTCGACACTTTATCAAGGACTGCAATGAGCAGTCTCTAGAGTTGCCCCCCTCGAACGCGTTTGGGCGACTTCTT GCACACAAGCTAGGAGATTACTATCACTTAACACATTTTGTCGATAACAATGTGACATCGGTCAGGCTTCATCGC ACGCCATTCTGCCGGCTACCCACTCCTTTGTCCGCTGTGCATGCTGCTTCCAATAGCACTCCACCTCCAGCTGTC CCGGCAATGAAAATCATGCGCCGAAACGATGGAGGGCAATTCGAAGGAAGTATTGGAGGTTCTTCAAACCCTTCC AAGACCAACTCGGAAGATGGCGATAGCGGACCAGATGGAGAACGTCACTGGTCTTCTTCTGGTGCTACACACGCT AAAGATCGTATGGCTTTGACGAGGGAGGAACGGGAGGCAAAATACCATGAAGTACGTGAACGAATCTTTCGTGAT TTTCCCGACAGTGCCAAATCAGATCCGGCCAGCGGTGACTCGAATCCCAACATGTCACGCTCCAGCTCGGCGAAT GGGCGCAAAAAAAACCAGAGGCAGCGAACTCCTCATGATGACAGCTTTGAGGTTCGCTCGCAGTTCAATGCCTAC TACCCAGGTATGCAATATGGAAATGGTGCTGCTCAGTACAATGCTCCTGTAAATGACAGCTCATATCCAAACCAA GTACCTTACTTGGTGGGACCTGGCGTGCCGCCACCCTCTGGTGGATACATGCCATCTAGTCGGAATGGTGCCATT TACCCTGGGCAACTGAACATGAATGTGAATGTGAATGGCTCCCAGTTTCCAGTGGCAATGTCGCCTCAGATGGCC TCCAATAGCTCGTGGCAAGGAGGAAACATGCCGCAACAATCTCCATATTCCGGGTATGCTACGATGAACCAGCAG GGGATGATGAACCAGCCGTCCTCAAACGCTTCCTCGCCGGCAATGAACAACTATGCCGTGCCCAATGTGACCCCG TATCAACAAAACCCCAATTGGAACTCGCCTCCTTTCCCCACAAATTTCCAGCAGTCCCAGCACCCACGAAATGGA CCGCCTGTTCACTGGCCCAACTATCCTCATCAGCCAATGGCTTCTAACATGCCACTCAACATGCCGCTTAACATG AACTCAAACATGGGCTCCAACATGGGTCTTAATATGAGCTCCAATATGCCGTCCAATATGGGCGCATATCCTTAC GCTCAATACCCCGGGCAGCATATGAATCCTGCTCTCCAAAATTCTGCCGGATCCCACGCAGCAATGCAAGCAGGA TATGCCAGGTCACACTTCAACCCTCAGACACGCTCATTCATCCCCGGCGGTGCTCCTCTCGGGCGTCACCCGAAC AAAAGCCAACACCCAATGCAGCCGTATGGTACCATGCAACCTGGCGCCCAACAGCAATGGCATGGGTATCCGGAA CCAAGTTCCAACCGGACTATGGACTCAACCCCGGCTATGAATTCCAACCGAGTGCCCACCGGTCCTCGAGACTCG ATCGCGAAATGGGGCACACCATCTCATCTTCCCCCCAAACCCCCGCCTTCCGAAGTCCCTTCCGACTTTGATCTA AAAAGCCGAACCGTCCCGGCCTCGGTCCCAGCACCAACATACAGCAACAATGGAATTTCCGCCGTCAGCAATGGA CCACTTGTGGTCTCTGGGGGCACAACTGTCTCCAAGCCGAACTAA |
Gene | >Pro_DTO377G3_2|g4685.t1 ATGGCGTCAAAAAGTCCCCCAGGTGGAGACGGCCCTCTCTCCTTTGCAAAGGTAAGCTAAGAGTTTGCTCCACTA CCTCATGGCTCATCGCTAATTCCGTGACAAGATCGCCGCTATGCCCGCCCCCCTCAGCCCACATTCTTCCTCGGT ATCTGATGAAAACGAAATATGCGAGCCAGCAGACCAATCACTTTACTCAAAAGCAAATGGCTCCGGTGCATCTTT GCCCAGCCAGCATAATGTCGATAAAACGCCAGAGGCTAGTTCCATAGAACTAGCTGTTGATGATCTAGGGAGAGG TGTGCAAGACATTAGCATCACCTCGGAAAATCACAGTGATGGACCAAGCTCGTTTGTTAGCGGCCAAGATGATGG CTTGCTCAAGCGGGAAAACTCTTTTGAAGATGATCGCACTCACCTTTCTACCTCATCCACAAAAATGACCAACTT TGATTCCAAGAGTCTTGCCTCGGTGACGACCTTTGCAATGGATGAAAAGGACTCTGTACGTCCCGATGATAGTGC TAGTGTGCAAGCGATTGATGAAGAGGAGTCGCTTTCCGGACTTGCTTCTGGGGCTCCAAACTCAGTGGCAGGCTC TGAAGCTGGCAGTCGTGCGTTTCGGGATCATTACCGAGATGGCATTCCTACACGCCCACGCGGAATTTTGCCCGT GCCTCCTCTCTTTGGCGGTCCCCAGCCGGTGAATGGTGCAATTCCTCCAGATTCAATCGCGAATAATTTCGTGAT TCCAGCCAACTCCGATGGCATTGAAGATGGTCAGATATTACATGGGTTTCCCTTGGAGCCGGATGAAAAACTCCT AGAGGCAATGAAATCACCGAAAGATCGGCTGCTGATCCTGCAATTGGAGGAAAAAATTCGACACTTTATCAAGGA CTGCAATGAGCAGTCTCTAGAGTTGCCCCCCTCGAACGCGTTTGGGCGACTTCTTGCACACAAGCTAGGAGATTA CTATCACTTAACACATTTTGTCGATAACAATGTGACATCGGTCAGGCTTCATCGCACGCCATTCTGCCGGCTACC CACTCCTTTGTCCGCTGTGCATGCTGCTTCCAATAGCACTCCACCTCCAGCTGTCCCGGCAATGAAAATCATGCG CCGAAACGATGGAGGGCAATTCGAAGGAAGTATTGGAGGTTCTTCAAACCCTTCCAAGACCAACTCGGAAGATGG CGATAGCGGACCAGATGGAGAACGTCACTGGTCTTCTTCTGGTGCTACACACGCTAAAGATCGTATGGCTTTGAC GAGGGAGGAACGGGAGGCAAAATACCATGAAGTACGTGAACGAATCTTTCGTGATTTTCCCGACAGTGCCAAATC AGATCCGGCCAGCGGTGACTCGAATCCCAACATGTCACGCTCCAGCTCGGCGAATGGGCGCAAAAAAAACCAGAG GCAGCGAACTCCTCATGATGACAGCTTTGAGGTTCGCTCGCAGTTCAATGCCTACTACCCAGGTATGCAATATGG AAATGGTGCTGCTCAGTACAATGCTCCTGTAAATGACAGCTCATATCCAAACCAAGTACCTTACTTGGTGGGACC TGGCGTGCCGCCACCCTCTGGTGGATACATGCCATCTAGTCGGAATGGTGCCATTTACCCTGGGCAACTGAACAT GAATGTGAATGTGAATGGCTCCCAGTTTCCAGTGGCAATGTCGCCTCAGATGGCCTCCAATAGCTCGTGGCAAGG AGGAAACATGCCGCAACAATCTCCATATTCCGGGTATGCTACGATGAACCAGCAGGGGATGATGAACCAGCCGTC CTCAAACGCTTCCTCGCCGGCAATGAACAACTATGCCGTGCCCAATGTGACCCCGTATCAACAAAACCCCAATTG GAACTCGCCTCCTTTCCCCACAAATTTCCAGCAGTCCCAGCACCCACGAAATGGACCGCCTGTTCACTGGCCCAA CTATCCTCATCAGCCAATGGCTTCTAACATGCCACTCAACATGCCGCTTAACATGAACTCAAACATGGGCTCCAA CATGGGTCTTAATATGAGCTCCAATATGCCGTCCAATATGGGCGCATATCCTTACGCTCAATACCCCGGGCAGCA TATGAATCCTGCTCTCCAAAATTCTGCCGGATCCCACGCAGCAATGCAAGCAGGATATGCCAGGTCACACTTCAA CCCTCAGACACGCTCATTCATCCCCGGCGGTGCTCCTCTCGGGCGTCACCCGAACAAAAGCCAACACCCAATGCA GCCGTATGGTACCATGCAACCTGGCGCCCAACAGCAATGGCATGGGTATCCGGAACCAAGTTCCAACCGGACTAT GGACTCAACCCCGGCTATGAATTCCAACCGAGTGCCCACCGGTCCTCGAGACTCGATCGCGAAATGGGGCACACC ATCTCATCTTCCCCCCAAACCCCCGCCTTCCGAAGTCCCTTCCGACTTTGATCTAAAAAGCCGAACCGTCCCGGC CTCGGTCCCAGCACCAACATACAGCAACAATGGAATTTCCGCCGTCAGCAATGGACCACTTGTGGTCTCTGGGGG CACAACTGTCTCCAAGCCGAACTAA |