© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g4650.t1 |
| Gene name | |
| Location | scaffold_10:70014..70962 |
| Strand | + |
| Gene length (bp) | 948 |
| Transcript length (bp) | 819 |
| Coding sequence length (bp) | 819 |
| Protein length (aa) | 273 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00462 | Glutaredoxin | Glutaredoxin | 1.3E-11 | 168 | 233 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0097573 | glutathione oxidoreductase activity | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0015035 | protein-disulfide reductase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0015036 | disulfide oxidoreductase activity | No |
| GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4650.t1 MPSSQRRLRLIVVVVIALLFMVFYYTGDASKIQNQKFYRSTLDAMKAKEQAKQAKAQEKIQNPVHAPGQNGAAGA GAGDKVPVAAAEKAAVPPATGNEDTEEIPIAGRTKMTVPKKVNQDKPSEVQSEIKSEEEKEREEKAKREREEKER KEAEATTELNAILKRAPVIVFSKSYCPYSKKAKVILLEHYSIEPKPFVVELDQHPLGPYLQALLAQSTGRRTVPN VLVSGKSIGGGDDIAALDQSDELASTLRQMGGKWIVDVSHQAVEKSL* |
| Coding | >Pro_DTO377G3_2|g4650.t1 ATGCCTTCTTCCCAACGGCGGCTTCGACTGATCGTCGTTGTGGTCATCGCGCTTCTTTTTATGGTCTTTTACTAC ACCGGTGATGCAAGCAAAATCCAAAACCAAAAGTTCTATCGGTCAACCCTCGACGCAATGAAAGCGAAAGAGCAA GCTAAGCAGGCCAAGGCCCAAGAGAAAATCCAGAATCCCGTGCATGCGCCCGGACAGAATGGCGCTGCGGGTGCG GGTGCGGGTGACAAGGTGCCTGTCGCTGCGGCCGAGAAAGCTGCTGTTCCTCCTGCTACAGGGAATGAAGATACG GAGGAGATACCGATTGCGGGGAGGACGAAGATGACCGTTCCCAAGAAGGTGAATCAGGATAAGCCGTCAGAGGTT CAGTCGGAGATCAAGAGCGAGGAGGAGAAGGAGCGAGAGGAAAAAGCGAAGAGAGAGCGTGAGGAGAAAGAGAGG AAAGAGGCCGAGGCGACAACAGAGCTTAATGCCATTCTCAAGCGGGCTCCAGTCATCGTATTCTCCAAATCCTAT TGCCCCTACAGCAAGAAAGCCAAGGTGATCTTGCTGGAGCACTACTCTATCGAGCCGAAGCCATTCGTGGTCGAA TTGGATCAGCACCCGCTTGGGCCGTATCTGCAGGCCCTGCTCGCACAGAGCACGGGTCGTCGCACTGTGCCGAAT GTGCTCGTGAGCGGAAAGAGTATAGGTGGTGGAGACGATATTGCGGCATTGGATCAGAGCGACGAGCTGGCTTCG ACGCTGCGACAAATGGGTGGGAAATGGATCGTGGACGTGTCGCACCAGGCGGTTGAGAAATCACTATGA |
| Transcript | >Pro_DTO377G3_2|g4650.t1 ATGCCTTCTTCCCAACGGCGGCTTCGACTGATCGTCGTTGTGGTCATCGCGCTTCTTTTTATGGTCTTTTACTAC ACCGGTGATGCAAGCAAAATCCAAAACCAAAAGTTCTATCGGTCAACCCTCGACGCAATGAAAGCGAAAGAGCAA GCTAAGCAGGCCAAGGCCCAAGAGAAAATCCAGAATCCCGTGCATGCGCCCGGACAGAATGGCGCTGCGGGTGCG GGTGCGGGTGACAAGGTGCCTGTCGCTGCGGCCGAGAAAGCTGCTGTTCCTCCTGCTACAGGGAATGAAGATACG GAGGAGATACCGATTGCGGGGAGGACGAAGATGACCGTTCCCAAGAAGGTGAATCAGGATAAGCCGTCAGAGGTT CAGTCGGAGATCAAGAGCGAGGAGGAGAAGGAGCGAGAGGAAAAAGCGAAGAGAGAGCGTGAGGAGAAAGAGAGG AAAGAGGCCGAGGCGACAACAGAGCTTAATGCCATTCTCAAGCGGGCTCCAGTCATCGTATTCTCCAAATCCTAT TGCCCCTACAGCAAGAAAGCCAAGGTGATCTTGCTGGAGCACTACTCTATCGAGCCGAAGCCATTCGTGGTCGAA TTGGATCAGCACCCGCTTGGGCCGTATCTGCAGGCCCTGCTCGCACAGAGCACGGGTCGTCGCACTGTGCCGAAT GTGCTCGTGAGCGGAAAGAGTATAGGTGGTGGAGACGATATTGCGGCATTGGATCAGAGCGACGAGCTGGCTTCG ACGCTGCGACAAATGGGTGGGAAATGGATCGTGGACGTGTCGCACCAGGCGGTTGAGAAATCACTATGA |
| Gene | >Pro_DTO377G3_2|g4650.t1 ATGCCTTCTTCCCAACGGCGGCTTCGACTGATCGTCGTTGTGGTCATCGCGCTTCTTTTTATGGTCTTTTACTAC ACCGTGCGTCACCGGATCTCCCCCTTCCACACTGTTTCTTCAGATATCTAATACGACGCAATCGGATCCACAGGG TGATGCAAGCAAAATCCAAAACCAAAAGTTCTATCGGTCAACCCTCGACGCAATGAAAGCGAAAGAGCAAGCTAA GCAGGCCAAGGCCCAAGAGAAAATCCAGAATCCCGTGCATGCGCCCGGACAGAATGGCGCTGCGGGTGCGGGTGC GGGTGACAAGGTGCCTGTCGCTGCGGCCGAGAAAGCTGCTGTTCCTCCTGCTACAGGGAATGAAGATACGGAGGA GATACCGATTGCGGGGAGGACGAAGATGACCGTTCCCAAGAAGGTGAATCAGGATAAGCCGTCAGAGGTTCAGTC GGAGATCAAGAGCGAGGAGGAGAAGGAGCGAGAGGAAAAAGCGAAGAGAGAGCGTGAGGAGAAAGAGAGGAAAGA GGCCGAGGCGACAACAGAGCTTAATGCCATTCTCAAGCGGGCTCCAGGTATGTTTCTTTCCCCCGTTTTCCATTT CTGGCCCGTATCCAATACCAACAACATCCAGTCATCGTATTCTCCAAATCCTATTGCCCCTACAGCAAGAAAGCC AAGGTGATCTTGCTGGAGCACTACTCTATCGAGCCGAAGCCATTCGTGGTCGAATTGGATCAGCACCCGCTTGGG CCGTATCTGCAGGCCCTGCTCGCACAGAGCACGGGTCGTCGCACTGTGCCGAATGTGCTCGTGAGCGGAAAGAGT ATAGGTGGTGGAGACGATATTGCGGCATTGGATCAGAGCGACGAGCTGGCTTCGACGCTGCGACAAATGGGTGGG AAATGGATCGTGGACGTGTCGCACCAGGCGGTTGAGAAATCACTATGA |