Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4642.t1
Gene name
Locationscaffold_10:45646..46826
Strand-
Gene length (bp)1180
Transcript length (bp)1086
Coding sequence length (bp)1086
Protein length (aa) 362

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 1.2E-02 35 60
PF00400 WD40 WD domain, G-beta repeat 2.2E-02 116 151
PF00400 WD40 WD domain, G-beta repeat 1.6E-01 264 290

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4642.t1
MSLFGAGASSASAGQTNTTGDISKDVALNTPPEDGISDLRFSPTSEHLAVASWDKKVRIYEINDQGQSEGKALFE
HEAPVLNCCWSPDGTKVVGAGADKAARMLDLGSGTTTQVAAHDAPIRSCHMIPNPSVGGSPLLITGSWDKTVKYW
DLRQSTAIASVECQERVYTMDVKNKLLVIGTADRYINIINLDQPTKFYKTMQSPLKWQTRVVSCFSDASGFAVGS
VEGRCAIQYVEEKDSASNFSFKCHRETPPTNRDVCNIYSVNAISFHPIHGTFSTAGADGTFHFWDKDAKHRLKGY
PAVGGPITTTAFNRTGNIFAYSVSYDWSKGYSANTQQTVNKVMLHPIGPDETKPRPSTRKR*
Coding >Pro_DTO377G3_2|g4642.t1
ATGTCACTTTTCGGCGCCGGCGCGTCGTCGGCCTCGGCGGGCCAGACAAATACCACCGGCGACATTTCTAAGGAC
GTCGCCCTTAATACTCCCCCCGAGGATGGCATCTCGGATCTCCGCTTCTCGCCTACTAGCGAACACCTGGCCGTG
GCCTCGTGGGATAAGAAAGTCCGCATCTACGAAATCAACGACCAAGGGCAAAGTGAAGGAAAGGCACTCTTCGAG
CACGAAGCTCCAGTTCTGAACTGCTGCTGGTCTCCAGATGGAACCAAGGTCGTCGGTGCCGGTGCCGACAAGGCA
GCTCGCATGCTCGATCTCGGTTCAGGCACGACAACTCAAGTTGCCGCCCACGACGCTCCCATCCGAAGCTGCCAT
ATGATCCCCAATCCCTCCGTGGGCGGATCCCCACTCCTGATCACTGGCTCGTGGGACAAGACAGTCAAATACTGG
GATTTGCGCCAGTCCACCGCAATTGCCTCCGTCGAGTGTCAAGAGCGTGTCTACACCATGGACGTCAAGAACAAA
TTGCTCGTCATCGGCACCGCAGACCGCTACATCAACATCATCAACCTCGATCAGCCAACAAAGTTCTACAAGACC
ATGCAATCACCTCTCAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCAGATGCCTCGGGCTTCGCTGTCGGCTCG
GTCGAGGGCCGCTGTGCTATTCAGTACGTCGAGGAGAAGGATTCCGCCTCGAACTTCTCCTTCAAGTGCCACCGT
GAAACCCCGCCTACAAACCGCGATGTCTGCAATATCTACTCTGTTAACGCTATCTCTTTCCACCCCATCCATGGT
ACATTCAGCACGGCTGGTGCCGACGGCACTTTCCACTTCTGGGATAAGGATGCGAAGCACCGTCTGAAGGGTTAT
CCCGCTGTCGGAGGCCCTATCACTACCACCGCTTTCAACCGTACTGGAAATATCTTCGCTTACTCCGTCAGCTAC
GACTGGAGCAAGGGTTACTCCGCCAATACCCAACAGACTGTCAACAAGGTCATGTTGCACCCTATCGGGCCTGAT
GAGACAAAGCCTAGACCGAGCACGCGCAAGCGTTGA
Transcript >Pro_DTO377G3_2|g4642.t1
ATGTCACTTTTCGGCGCCGGCGCGTCGTCGGCCTCGGCGGGCCAGACAAATACCACCGGCGACATTTCTAAGGAC
GTCGCCCTTAATACTCCCCCCGAGGATGGCATCTCGGATCTCCGCTTCTCGCCTACTAGCGAACACCTGGCCGTG
GCCTCGTGGGATAAGAAAGTCCGCATCTACGAAATCAACGACCAAGGGCAAAGTGAAGGAAAGGCACTCTTCGAG
CACGAAGCTCCAGTTCTGAACTGCTGCTGGTCTCCAGATGGAACCAAGGTCGTCGGTGCCGGTGCCGACAAGGCA
GCTCGCATGCTCGATCTCGGTTCAGGCACGACAACTCAAGTTGCCGCCCACGACGCTCCCATCCGAAGCTGCCAT
ATGATCCCCAATCCCTCCGTGGGCGGATCCCCACTCCTGATCACTGGCTCGTGGGACAAGACAGTCAAATACTGG
GATTTGCGCCAGTCCACCGCAATTGCCTCCGTCGAGTGTCAAGAGCGTGTCTACACCATGGACGTCAAGAACAAA
TTGCTCGTCATCGGCACCGCAGACCGCTACATCAACATCATCAACCTCGATCAGCCAACAAAGTTCTACAAGACC
ATGCAATCACCTCTCAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCAGATGCCTCGGGCTTCGCTGTCGGCTCG
GTCGAGGGCCGCTGTGCTATTCAGTACGTCGAGGAGAAGGATTCCGCCTCGAACTTCTCCTTCAAGTGCCACCGT
GAAACCCCGCCTACAAACCGCGATGTCTGCAATATCTACTCTGTTAACGCTATCTCTTTCCACCCCATCCATGGT
ACATTCAGCACGGCTGGTGCCGACGGCACTTTCCACTTCTGGGATAAGGATGCGAAGCACCGTCTGAAGGGTTAT
CCCGCTGTCGGAGGCCCTATCACTACCACCGCTTTCAACCGTACTGGAAATATCTTCGCTTACTCCGTCAGCTAC
GACTGGAGCAAGGGTTACTCCGCCAATACCCAACAGACTGTCAACAAGGTCATGTTGCACCCTATCGGGCCTGAT
GAGACAAAGCCTAGACCGAGCACGCGCAAGCGTTGA
Gene >Pro_DTO377G3_2|g4642.t1
ATGTCACTTTTCGGCGCCGGCGCGTCGTCGGCCTCGGCGGGCCAGACAAATACCACCGGCGACATTTCTAAGGAC
GTCGCCCTTAATACTCCCCCCGAGGATGGCATCTCGGATCTCCGCTTCTCGCCTACTAGCGAACACCTGGCCGTG
GCCTCGTGGGATAAGAAAGTCCGCATCTACGAAATCAACGACCAAGGGCAAAGTGAAGGAAAGGCACTCTTCGAG
CACGAAGCTCCAGTTCTGAACTGCTGCTGGTCTCCAGTAAGCTGACCCCCGTTCTCGCCATCCCGGCGTATTTCC
CCCACAGCCCAGTTCCCATAGACAGAAACTAACATTGTCTTTTTTCTTCTTATAGGATGGAACCAAGGTCGTCGG
TGCCGGTGCCGACAAGGCAGCTCGCATGCTCGATCTCGGTTCAGGCACGACAACTCAAGTTGCCGCCCACGACGC
TCCCATCCGAAGCTGCCATATGATCCCCAATCCCTCCGTGGGCGGATCCCCACTCCTGATCACTGGCTCGTGGGA
CAAGACAGTCAAATACTGGGATTTGCGCCAGTCCACCGCAATTGCCTCCGTCGAGTGTCAAGAGCGTGTCTACAC
CATGGACGTCAAGAACAAATTGCTCGTCATCGGCACCGCAGACCGCTACATCAACATCATCAACCTCGATCAGCC
AACAAAGTTCTACAAGACCATGCAATCACCTCTCAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCAGATGCCTC
GGGCTTCGCTGTCGGCTCGGTCGAGGGCCGCTGTGCTATTCAGTACGTCGAGGAGAAGGATTCCGCCTCGAACTT
CTCCTTCAAGTGCCACCGTGAAACCCCGCCTACAAACCGCGATGTCTGCAATATCTACTCTGTTAACGCTATCTC
TTTCCACCCCATCCATGGTACATTCAGCACGGCTGGTGCCGACGGCACTTTCCACTTCTGGGATAAGGATGCGAA
GCACCGTCTGAAGGGTTATCCCGCTGTCGGAGGCCCTATCACTACCACCGCTTTCAACCGTACTGGAAATATCTT
CGCTTACTCCGTCAGCTACGACTGGAGCAAGGGTTACTCCGCCAATACCCAACAGACTGTCAACAAGGTCATGTT
GCACCCTATCGGGCCTGATGAGACAAAGCCTAGACCGAGCACGCGCAAGCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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