Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4636.t1
Gene name
Locationscaffold_10:34730..35580
Strand-
Gene length (bp)850
Transcript length (bp)615
Coding sequence length (bp)615
Protein length (aa) 205

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04252 RNA_Me_trans Predicted SAM-dependent RNA methyltransferase 1.1E-83 6 199

GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0016740 transferase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4636.t1
MTRPTFVVEHLDPELGPWSTLEYACIARESHDRGARFLLSSVPAELQMPADLAATKGLEVEQRSVEEIFADRKEK
VCLLDPSAEAELSPEDGDTFEVFLFGGILGDDPPRDRTSELRKKGYVGRRLGPKQMTTDTAVRVTRLVVHEKVPL
EDIQYVDYPELLINEHERTEMPFRYVKDANEQPIMPDGMVDLIKKDADKSIDFF*
Coding >Pro_DTO377G3_2|g4636.t1
ATGACTCGCCCAACCTTCGTAGTCGAGCATCTGGATCCCGAGCTGGGCCCATGGTCCACGCTCGAATATGCCTGC
ATTGCGCGTGAATCTCACGACCGCGGGGCACGATTCCTCCTCAGCTCTGTGCCCGCCGAGCTGCAGATGCCCGCA
GATCTAGCCGCCACCAAGGGTCTCGAGGTCGAGCAGCGCAGTGTCGAGGAGATCTTTGCCGACCGCAAGGAAAAG
GTCTGCTTGCTAGACCCCTCCGCTGAGGCCGAGTTGAGTCCTGAGGATGGTGATACCTTTGAGGTCTTCTTGTTC
GGTGGTATCCTCGGTGATGACCCGCCTAGAGATCGCACCTCGGAGTTGAGAAAGAAGGGATATGTCGGCCGCCGA
TTGGGGCCTAAGCAGATGACCACCGATACTGCCGTGCGAGTTACTCGTTTGGTTGTTCACGAGAAGGTACCACTC
GAGGACATTCAATATGTCGACTACCCGGAATTGCTCATCAATGAGCATGAGCGCACCGAAATGCCTTTCCGCTAT
GTCAAGGACGCCAATGAGCAGCCTATCATGCCTGATGGGATGGTGGATCTTATTAAGAAGGACGCCGACAAGTCT
ATTGATTTCTTCTAA
Transcript >Pro_DTO377G3_2|g4636.t1
ATGACTCGCCCAACCTTCGTAGTCGAGCATCTGGATCCCGAGCTGGGCCCATGGTCCACGCTCGAATATGCCTGC
ATTGCGCGTGAATCTCACGACCGCGGGGCACGATTCCTCCTCAGCTCTGTGCCCGCCGAGCTGCAGATGCCCGCA
GATCTAGCCGCCACCAAGGGTCTCGAGGTCGAGCAGCGCAGTGTCGAGGAGATCTTTGCCGACCGCAAGGAAAAG
GTCTGCTTGCTAGACCCCTCCGCTGAGGCCGAGTTGAGTCCTGAGGATGGTGATACCTTTGAGGTCTTCTTGTTC
GGTGGTATCCTCGGTGATGACCCGCCTAGAGATCGCACCTCGGAGTTGAGAAAGAAGGGATATGTCGGCCGCCGA
TTGGGGCCTAAGCAGATGACCACCGATACTGCCGTGCGAGTTACTCGTTTGGTTGTTCACGAGAAGGTACCACTC
GAGGACATTCAATATGTCGACTACCCGGAATTGCTCATCAATGAGCATGAGCGCACCGAAATGCCTTTCCGCTAT
GTCAAGGACGCCAATGAGCAGCCTATCATGCCTGATGGGATGGTGGATCTTATTAAGAAGGACGCCGACAAGTCT
ATTGATTTCTTCTAA
Gene >Pro_DTO377G3_2|g4636.t1
ATGACTCGCCCAACCTTCGTAGTCGAGCATCTGGATCCCGAGCTGGGCCCATGGTCCACGCTCGAATATGCCTGC
ATTGCGCGTGAATCTCACGACCGCGGGGCACGATTCCTCCTCAGCTCTGTGCCCGCCGAGCTGCAGATGCCCGCA
GATCTAGCCGCCACCAAGGGTCTCGAGGTCGAGCAGCGCAGTGTCGAGGAGATCTTTGCCGACCGCAAGGAAAAG
GTCTGCTTGCTAGACCCCTCCGCTGAGGCCGAGTTGAGTCCTGAGGATGGTGATACCTTTGAGGTCTTCTTGTTC
GGTGGTATCCTCGGTATGGAATTTTTCTCTTACCCCGCGATATGTACAGATTGAGTTCAGACTGACCCTTTGACT
GTTAACTGCATCTGCAGGTGATGACCCGCCTAGAGGTATGTACTTTTTTCTCCATGCACTTCGGCGAGAGACTGA
CGACTTGGTAGATCGCACCTCGGAGTTGAGAAAGAAGGGATATGTCGGCCGCCGATTGGGGCCTAAGCAGATGAC
CACCGATACTGCCGTGCGAGTTACTCGTTTGGTTGTTCACGAGAAGGGTGAGTGTGGAAAGTAAACAGTCTGGAC
AATATATGTGCTGGATGCTGATTCTGCCCAGTACCACTCGAGGACATTCAATATGTCGACTACCCGGAATTGCTC
ATCAATGAGCATGAGCGCACCGAAATGCCTTTCCGCTATGTCAAGGACGCCAATGAGCAGCCTATCATGCCTGAT
GTAAGACTATTGAATTGCTGAGAGAAACAAGAAGCTAACTATTCAGGGGATGGTGGATCTTATTAAGAAGGACGC
CGACAAGTCTATTGATTTCTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail