Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4636.t1
Gene name
Locationscaffold_10:34730..35580
Strand-
Gene length (bp)850
Transcript length (bp)615
Coding sequence length (bp)615
Protein length (aa) 205

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04252 RNA_Me_trans Predicted SAM-dependent RNA methyltransferase 1.1E-83 6 199

GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0016740 transferase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4636.t1
MTRPTFVVEHLDPELGPWSTLEYACIARESHDRGARFLLSSVPAELQMPADLAATKGLEVEQRSVEEIFADRKEK
VCLLDPSAEAELSPEDGDTFEVFLFGGILGDDPPRDRTSELRKKGYVGRRLGPKQMTTDTAVRVTRLVVHEKVPL
EDIQYVDYPELLINEHERTEMPFRYVKDANEQPIMPDGMVDLIKKDADKSIDFF*
Coding >Pro_DTO377G3_2|g4636.t1
ATGACTCGCCCAACCTTCGTAGTCGAGCATCTGGATCCCGAGCTGGGCCCATGGTCCACGCTCGAATATGCCTGC
ATTGCGCGTGAATCTCACGACCGCGGGGCACGATTCCTCCTCAGCTCTGTGCCCGCCGAGCTGCAGATGCCCGCA
GATCTAGCCGCCACCAAGGGTCTCGAGGTCGAGCAGCGCAGTGTCGAGGAGATCTTTGCCGACCGCAAGGAAAAG
GTCTGCTTGCTAGACCCCTCCGCTGAGGCCGAGTTGAGTCCTGAGGATGGTGATACCTTTGAGGTCTTCTTGTTC
GGTGGTATCCTCGGTGATGACCCGCCTAGAGATCGCACCTCGGAGTTGAGAAAGAAGGGATATGTCGGCCGCCGA
TTGGGGCCTAAGCAGATGACCACCGATACTGCCGTGCGAGTTACTCGTTTGGTTGTTCACGAGAAGGTACCACTC
GAGGACATTCAATATGTCGACTACCCGGAATTGCTCATCAATGAGCATGAGCGCACCGAAATGCCTTTCCGCTAT
GTCAAGGACGCCAATGAGCAGCCTATCATGCCTGATGGGATGGTGGATCTTATTAAGAAGGACGCCGACAAGTCT
ATTGATTTCTTCTAA
Transcript >Pro_DTO377G3_2|g4636.t1
ATGACTCGCCCAACCTTCGTAGTCGAGCATCTGGATCCCGAGCTGGGCCCATGGTCCACGCTCGAATATGCCTGC
ATTGCGCGTGAATCTCACGACCGCGGGGCACGATTCCTCCTCAGCTCTGTGCCCGCCGAGCTGCAGATGCCCGCA
GATCTAGCCGCCACCAAGGGTCTCGAGGTCGAGCAGCGCAGTGTCGAGGAGATCTTTGCCGACCGCAAGGAAAAG
GTCTGCTTGCTAGACCCCTCCGCTGAGGCCGAGTTGAGTCCTGAGGATGGTGATACCTTTGAGGTCTTCTTGTTC
GGTGGTATCCTCGGTGATGACCCGCCTAGAGATCGCACCTCGGAGTTGAGAAAGAAGGGATATGTCGGCCGCCGA
TTGGGGCCTAAGCAGATGACCACCGATACTGCCGTGCGAGTTACTCGTTTGGTTGTTCACGAGAAGGTACCACTC
GAGGACATTCAATATGTCGACTACCCGGAATTGCTCATCAATGAGCATGAGCGCACCGAAATGCCTTTCCGCTAT
GTCAAGGACGCCAATGAGCAGCCTATCATGCCTGATGGGATGGTGGATCTTATTAAGAAGGACGCCGACAAGTCT
ATTGATTTCTTCTAA
Gene >Pro_DTO377G3_2|g4636.t1
ATGACTCGCCCAACCTTCGTAGTCGAGCATCTGGATCCCGAGCTGGGCCCATGGTCCACGCTCGAATATGCCTGC
ATTGCGCGTGAATCTCACGACCGCGGGGCACGATTCCTCCTCAGCTCTGTGCCCGCCGAGCTGCAGATGCCCGCA
GATCTAGCCGCCACCAAGGGTCTCGAGGTCGAGCAGCGCAGTGTCGAGGAGATCTTTGCCGACCGCAAGGAAAAG
GTCTGCTTGCTAGACCCCTCCGCTGAGGCCGAGTTGAGTCCTGAGGATGGTGATACCTTTGAGGTCTTCTTGTTC
GGTGGTATCCTCGGTATGGAATTTTTCTCTTACCCCGCGATATGTACAGATTGAGTTCAGACTGACCCTTTGACT
GTTAACTGCATCTGCAGGTGATGACCCGCCTAGAGGTATGTACTTTTTTCTCCATGCACTTCGGCGAGAGACTGA
CGACTTGGTAGATCGCACCTCGGAGTTGAGAAAGAAGGGATATGTCGGCCGCCGATTGGGGCCTAAGCAGATGAC
CACCGATACTGCCGTGCGAGTTACTCGTTTGGTTGTTCACGAGAAGGGTGAGTGTGGAAAGTAAACAGTCTGGAC
AATATATGTGCTGGATGCTGATTCTGCCCAGTACCACTCGAGGACATTCAATATGTCGACTACCCGGAATTGCTC
ATCAATGAGCATGAGCGCACCGAAATGCCTTTCCGCTATGTCAAGGACGCCAATGAGCAGCCTATCATGCCTGAT
GTAAGACTATTGAATTGCTGAGAGAAACAAGAAGCTAACTATTCAGGGGATGGTGGATCTTATTAAGAAGGACGC
CGACAAGTCTATTGATTTCTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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