Protein ID | Pro_DTO377G3_2|g4628.t1 |
Gene name | |
Location | scaffold_10:15044..18097 |
Strand | + |
Gene length (bp) | 3053 |
Transcript length (bp) | 2952 |
Coding sequence length (bp) | 2952 |
Protein length (aa) | 984 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10214 | Rrn6 | RNA polymerase I-specific transcription-initiation factor | 1.9E-212 | 103 | 983 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 58 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4628.t1 MDEHTSSALHYGHVGRAVYLPEEQEWTFTRSFARPPLIKYTGVTKTKIPSPFRSAKARPIPRVPEKDPRRLITSA HPDLAASWSSIRAEPLSKAITTVAEKYDPEVSELFDLGYAVDQRRHDKRLRSVAIAVAVTGECRNIISFRTLEEE ILELTSPQKLAFRAPSISDQEMSEWSKCGAPVRQVHFARPLEEKPMFLAARLPATTTIFRPLYHFDPVPMCPSGD SILGSSTPLKNSRLDANPIAELCVSQTGGFSHADVTFNPWYQRQFAIVDTRGKWSVWEITGRQRLQQATWAAELV KSGSLPMQDYKRKHGCPRLDGWASIEWVHDVGSLLVSNRHNVIIYAFTDDQIPTRTVELGMTKPSEWVLDVQTNS RKPSQFFVLTTTRIMWFDVGALPGEHDTSLSLYPRVSWRHFRDPEDTTLRLSDIVVYQDLYLVLYSQLTRLVQVF PCPFISDEETESISVPDPLVLDAPLLADIPSTQHDSVVRFSRLVFREIAHSIAPVGRNFYNADLPFIKLFWMDSN LAVHESTFEAPRGNPDEPDSFRESSILRLRKRYAPTICAGPTDDFVVDDWDESATKQTIVRRCKPQMGRVDTRSD LQWTLDFSGVYQIATGKMKMEIHPQKQTKRLMPKPRTFDALIGDLQIEMENGSDQPPGKTMVELTDKKLLAEGLD ERADDLQRLISALVSKQPNPNAQCRYMFLPLPSPNGSYGIPAKLSGEADNDLLNTYDRIVDDWMSTLPRAIPVQT RLMKEKVIRGVAVDLILSRLVKISTSLDSIILAKPTDPVEDQAIEKANEKAATQNNYLQSSYFSLSSSQIPASQS SMAKSQVFGSEPDAMPIQQSKYTAVPVLSGLSAFTTFKTPRPAPRNVTNLLAHWSVGTNPEDYSWERMEDEEMRE TRARTPRSRRKKRPQPRDQSLPATPVIPMIRTWDSQPLAPPRLNVASSQPAMDDVSMTQMERGAFGARPLKKPKQ KKKRAAGF* |
Coding | >Pro_DTO377G3_2|g4628.t1 ATGGATGAACATACAAGCAGTGCTCTCCACTATGGGCACGTCGGACGAGCTGTCTATCTTCCTGAGGAGCAGGAA TGGACGTTCACTCGTTCTTTTGCTAGGCCCCCGTTGATCAAATATACCGGTGTGACCAAGACAAAAATCCCATCG CCTTTCCGCTCAGCCAAAGCTCGACCAATACCCAGAGTACCCGAGAAAGACCCTAGGAGGTTAATCACAAGCGCG CATCCTGATTTGGCGGCATCGTGGTCCTCCATTCGCGCTGAACCTTTGTCGAAAGCTATCACGACTGTAGCCGAA AAATATGACCCGGAGGTCTCTGAGCTTTTTGATCTCGGTTATGCGGTGGATCAAAGGCGTCATGACAAGAGGCTG CGCTCAGTTGCAATTGCGGTGGCTGTTACCGGAGAATGTCGTAATATAATCTCATTTCGAACACTGGAAGAGGAG ATTTTGGAGTTGACTTCTCCACAGAAGTTAGCATTCCGTGCTCCATCTATCAGTGACCAGGAAATGTCTGAATGG TCCAAGTGTGGTGCGCCGGTACGTCAAGTACACTTTGCACGTCCCTTGGAGGAGAAGCCCATGTTCCTGGCTGCC CGTCTCCCTGCAACGACTACAATATTCCGACCTCTTTACCATTTCGACCCTGTGCCTATGTGCCCTTCGGGGGAT AGTATACTGGGATCATCCACCCCTTTGAAAAACTCTCGGCTGGATGCGAATCCAATCGCGGAGCTATGTGTGTCG CAAACAGGTGGCTTCTCACATGCAGATGTGACCTTTAACCCCTGGTATCAGAGACAATTCGCCATTGTAGACACC AGAGGTAAGTGGAGTGTCTGGGAGATCACCGGCAGACAGCGACTCCAGCAGGCCACTTGGGCTGCCGAGCTTGTC AAATCAGGCTCGTTGCCCATGCAGGATTATAAACGCAAACATGGTTGCCCTCGCCTTGATGGCTGGGCATCAATC GAGTGGGTCCATGATGTTGGATCGCTACTTGTCTCCAATCGTCACAACGTCATAATCTATGCCTTCACGGATGAC CAGATTCCAACACGCACGGTTGAGTTGGGAATGACAAAGCCATCTGAGTGGGTTCTAGATGTTCAAACAAACTCG CGCAAGCCATCACAGTTTTTCGTCCTGACGACAACGAGAATAATGTGGTTTGATGTCGGAGCCCTACCAGGCGAG CATGACACAAGTCTTTCACTATACCCTCGAGTGTCCTGGAGGCACTTTCGAGACCCCGAAGACACGACCTTGCGA CTTAGCGACATAGTCGTATACCAAGATCTGTATCTCGTTCTGTATTCACAGCTCACCCGGCTAGTACAAGTATTC CCTTGTCCCTTCATATCCGATGAAGAGACTGAGTCCATATCTGTACCCGATCCCCTGGTGCTAGATGCGCCCCTG TTGGCAGATATACCGTCAACTCAACACGACTCTGTCGTGCGATTCTCGAGACTCGTATTTAGAGAAATTGCCCAC TCTATTGCACCAGTGGGTAGGAATTTCTACAACGCCGACTTGCCATTCATCAAGCTTTTCTGGATGGATTCCAAT CTTGCCGTCCACGAATCTACTTTCGAGGCCCCGCGCGGAAACCCAGACGAGCCGGACTCGTTTCGCGAAAGCAGT ATCTTGCGGTTAAGAAAGCGTTATGCTCCGACAATATGCGCTGGACCCACCGATGACTTTGTTGTGGATGATTGG GATGAATCAGCGACAAAGCAAACGATTGTTCGTCGTTGCAAACCCCAAATGGGCCGCGTTGATACAAGGTCGGAC TTGCAGTGGACCCTGGACTTTTCTGGCGTCTACCAAATAGCGACAGGGAAAATGAAAATGGAAATCCATCCACAA AAGCAGACGAAGAGATTAATGCCCAAACCAAGGACATTTGATGCGTTAATAGGGGACCTCCAAATCGAAATGGAG AATGGATCGGACCAACCTCCAGGCAAAACCATGGTTGAATTGACCGACAAGAAACTTCTGGCCGAGGGTCTTGAT GAAAGAGCAGATGATCTGCAACGACTCATTTCAGCACTCGTCTCTAAACAGCCGAACCCCAACGCGCAATGTCGA TATATGTTTCTACCACTCCCATCACCGAACGGCAGTTATGGCATCCCGGCCAAACTCTCAGGCGAAGCAGATAAC GATCTTTTAAATACATATGATCGAATCGTCGATGATTGGATGTCTACCCTGCCTCGCGCCATCCCCGTGCAGACC CGACTCATGAAAGAAAAAGTCATTCGGGGGGTTGCTGTCGATCTCATCCTTTCGCGCCTAGTAAAAATCTCTACC TCATTAGATAGCATCATACTGGCCAAGCCCACAGATCCTGTCGAGGACCAAGCAATTGAGAAGGCAAATGAAAAG GCCGCGACACAGAACAATTATCTGCAATCGAGCTACTTCTCATTATCATCATCGCAGATCCCTGCAAGCCAATCA TCAATGGCCAAAAGCCAAGTCTTTGGATCTGAACCAGACGCAATGCCAATCCAGCAGTCCAAGTACACCGCAGTC CCGGTCTTGAGTGGTCTCTCAGCGTTCACCACATTCAAGACCCCACGTCCAGCACCACGAAACGTGACAAACCTC TTAGCGCACTGGTCGGTAGGAACCAACCCGGAAGACTATTCATGGGAGAGGATGGAAGACGAGGAAATGCGGGAG ACGAGGGCACGCACACCCAGGAGCAGACGGAAGAAACGCCCACAGCCTCGTGACCAATCCCTCCCTGCGACTCCG GTAATTCCTATGATCCGGACATGGGACAGTCAGCCACTCGCACCTCCCCGACTCAACGTCGCCAGTAGTCAGCCC GCGATGGATGATGTGTCGATGACCCAGATGGAGCGGGGAGCTTTTGGAGCCCGACCACTCAAGAAGCCGAAACAG AAGAAGAAAAGAGCAGCTGGATTTTAG |
Transcript | >Pro_DTO377G3_2|g4628.t1 ATGGATGAACATACAAGCAGTGCTCTCCACTATGGGCACGTCGGACGAGCTGTCTATCTTCCTGAGGAGCAGGAA TGGACGTTCACTCGTTCTTTTGCTAGGCCCCCGTTGATCAAATATACCGGTGTGACCAAGACAAAAATCCCATCG CCTTTCCGCTCAGCCAAAGCTCGACCAATACCCAGAGTACCCGAGAAAGACCCTAGGAGGTTAATCACAAGCGCG CATCCTGATTTGGCGGCATCGTGGTCCTCCATTCGCGCTGAACCTTTGTCGAAAGCTATCACGACTGTAGCCGAA AAATATGACCCGGAGGTCTCTGAGCTTTTTGATCTCGGTTATGCGGTGGATCAAAGGCGTCATGACAAGAGGCTG CGCTCAGTTGCAATTGCGGTGGCTGTTACCGGAGAATGTCGTAATATAATCTCATTTCGAACACTGGAAGAGGAG ATTTTGGAGTTGACTTCTCCACAGAAGTTAGCATTCCGTGCTCCATCTATCAGTGACCAGGAAATGTCTGAATGG TCCAAGTGTGGTGCGCCGGTACGTCAAGTACACTTTGCACGTCCCTTGGAGGAGAAGCCCATGTTCCTGGCTGCC CGTCTCCCTGCAACGACTACAATATTCCGACCTCTTTACCATTTCGACCCTGTGCCTATGTGCCCTTCGGGGGAT AGTATACTGGGATCATCCACCCCTTTGAAAAACTCTCGGCTGGATGCGAATCCAATCGCGGAGCTATGTGTGTCG CAAACAGGTGGCTTCTCACATGCAGATGTGACCTTTAACCCCTGGTATCAGAGACAATTCGCCATTGTAGACACC AGAGGTAAGTGGAGTGTCTGGGAGATCACCGGCAGACAGCGACTCCAGCAGGCCACTTGGGCTGCCGAGCTTGTC AAATCAGGCTCGTTGCCCATGCAGGATTATAAACGCAAACATGGTTGCCCTCGCCTTGATGGCTGGGCATCAATC GAGTGGGTCCATGATGTTGGATCGCTACTTGTCTCCAATCGTCACAACGTCATAATCTATGCCTTCACGGATGAC CAGATTCCAACACGCACGGTTGAGTTGGGAATGACAAAGCCATCTGAGTGGGTTCTAGATGTTCAAACAAACTCG CGCAAGCCATCACAGTTTTTCGTCCTGACGACAACGAGAATAATGTGGTTTGATGTCGGAGCCCTACCAGGCGAG CATGACACAAGTCTTTCACTATACCCTCGAGTGTCCTGGAGGCACTTTCGAGACCCCGAAGACACGACCTTGCGA CTTAGCGACATAGTCGTATACCAAGATCTGTATCTCGTTCTGTATTCACAGCTCACCCGGCTAGTACAAGTATTC CCTTGTCCCTTCATATCCGATGAAGAGACTGAGTCCATATCTGTACCCGATCCCCTGGTGCTAGATGCGCCCCTG TTGGCAGATATACCGTCAACTCAACACGACTCTGTCGTGCGATTCTCGAGACTCGTATTTAGAGAAATTGCCCAC TCTATTGCACCAGTGGGTAGGAATTTCTACAACGCCGACTTGCCATTCATCAAGCTTTTCTGGATGGATTCCAAT CTTGCCGTCCACGAATCTACTTTCGAGGCCCCGCGCGGAAACCCAGACGAGCCGGACTCGTTTCGCGAAAGCAGT ATCTTGCGGTTAAGAAAGCGTTATGCTCCGACAATATGCGCTGGACCCACCGATGACTTTGTTGTGGATGATTGG GATGAATCAGCGACAAAGCAAACGATTGTTCGTCGTTGCAAACCCCAAATGGGCCGCGTTGATACAAGGTCGGAC TTGCAGTGGACCCTGGACTTTTCTGGCGTCTACCAAATAGCGACAGGGAAAATGAAAATGGAAATCCATCCACAA AAGCAGACGAAGAGATTAATGCCCAAACCAAGGACATTTGATGCGTTAATAGGGGACCTCCAAATCGAAATGGAG AATGGATCGGACCAACCTCCAGGCAAAACCATGGTTGAATTGACCGACAAGAAACTTCTGGCCGAGGGTCTTGAT GAAAGAGCAGATGATCTGCAACGACTCATTTCAGCACTCGTCTCTAAACAGCCGAACCCCAACGCGCAATGTCGA TATATGTTTCTACCACTCCCATCACCGAACGGCAGTTATGGCATCCCGGCCAAACTCTCAGGCGAAGCAGATAAC GATCTTTTAAATACATATGATCGAATCGTCGATGATTGGATGTCTACCCTGCCTCGCGCCATCCCCGTGCAGACC CGACTCATGAAAGAAAAAGTCATTCGGGGGGTTGCTGTCGATCTCATCCTTTCGCGCCTAGTAAAAATCTCTACC TCATTAGATAGCATCATACTGGCCAAGCCCACAGATCCTGTCGAGGACCAAGCAATTGAGAAGGCAAATGAAAAG GCCGCGACACAGAACAATTATCTGCAATCGAGCTACTTCTCATTATCATCATCGCAGATCCCTGCAAGCCAATCA TCAATGGCCAAAAGCCAAGTCTTTGGATCTGAACCAGACGCAATGCCAATCCAGCAGTCCAAGTACACCGCAGTC CCGGTCTTGAGTGGTCTCTCAGCGTTCACCACATTCAAGACCCCACGTCCAGCACCACGAAACGTGACAAACCTC TTAGCGCACTGGTCGGTAGGAACCAACCCGGAAGACTATTCATGGGAGAGGATGGAAGACGAGGAAATGCGGGAG ACGAGGGCACGCACACCCAGGAGCAGACGGAAGAAACGCCCACAGCCTCGTGACCAATCCCTCCCTGCGACTCCG GTAATTCCTATGATCCGGACATGGGACAGTCAGCCACTCGCACCTCCCCGACTCAACGTCGCCAGTAGTCAGCCC GCGATGGATGATGTGTCGATGACCCAGATGGAGCGGGGAGCTTTTGGAGCCCGACCACTCAAGAAGCCGAAACAG AAGAAGAAAAGAGCAGCTGGATTTTAG |
Gene | >Pro_DTO377G3_2|g4628.t1 ATGGATGAACATACAAGCAGTGCTCTCCACTATGGGCACGTCGGACGAGCTGTCTATCTTCCTGAGGAGCAGGAA TGGACGTTCACTCGTTCTTTTGCTAGGCGTAGGTACTTGAGCCTCCTTTTCTTCAAACCAGCTAACATGTTCCCA AGCCCCGTTGATCAAATATACCGGTGTGACCAAGACAAAAATCCCATCGCCTTTCCGCTCAGCCAAAGCTCGACC AATACCCAGAGTACCCGAGAAAGACCCTAGGAGGTTAATCACAAGCGCGCATCCTGATTTGGCGGCATCGTGGTC CTCCATTCGCGCTGAACCTTTGTCGAAAGCTATCACGACTGTAGCCGAAAAATATGACCCGGAGGTCTCTGAGCT TTTTGATCTCGGTTATGCGGTGGATCAAAGGCGTCATGACAAGAGGCTGCGCTCAGTTGCAATTGCGGTGGCTGT TACCGGAGAATGTCGTAATATAATCTCATTTCGAACACTGGAAGAGGAGATTTTGGAGTTGACTTCTCCACAGAA GTTAGCATTCCGTGCTCCATCTATCAGTGACCAGGAAATGTCTGAATGGTCCAAGTGTGGTGCGCCGGTACGTCA AGTACACTTTGCACGTCCCTTGGAGGAGAAGCCCATGTTCCTGGCTGCCCGTCTCCCTGCAACGACTACAATATT CCGACCTCTTTACCATTTCGACCCTGTGCCTATGTGCCCTTCGGGGGATAGTATACTGGGATCATCCACCCCTTT GAAAAACTCTCGGCTGGATGCGAATCCAATCGCGGAGCTATGTGTGTCGCAAACAGGTGGCTTCTCACATGCAGA TGTGACCTTTAACCCCTGGTATCAGAGACAATTCGCCATTGTAGACACCAGAGGTAAGTGGAGTGTCTGGGAGAT CACCGGCAGACAGCGACTCCAGCAGGCCACTTGGGCTGCCGAGCTTGTCAAATCAGGCTCGTTGCCCATGCAGGA TTATAAACGCAAACATGGTTGCCCTCGCCTTGATGGCTGGGCATCAATCGAGTGGGTCCATGATGTTGGATCGCT ACTTGTCTCCAATCGTCACAACGTCATAATCTATGCCTTCACGGATGACCAGATTCCAACACGCACGGTTGAGTT GGGAATGACAAAGCCATCTGAGTGGGTTCTAGATGTTCAAACAAACTCGCGCAAGCCATCACAGTTTTTCGTCCT GACGACAACGAGAATAATGTGGTTTGATGTCGGAGCCCTACCAGGCGAGCATGACACAAGTCTTTCACTATACCC TCGAGTGTCCTGGAGGCACTTTCGAGACCCCGAAGACACGACCTTGCGACTTAGCGACATAGTCGTATACCAAGG TATGTGCTTGCGCGATTGAACACGGACTTCTAATACTAAGTTATTATCTAGATCTGTATCTCGTTCTGTATTCAC AGCTCACCCGGCTAGTACAAGTATTCCCTTGTCCCTTCATATCCGATGAAGAGACTGAGTCCATATCTGTACCCG ATCCCCTGGTGCTAGATGCGCCCCTGTTGGCAGATATACCGTCAACTCAACACGACTCTGTCGTGCGATTCTCGA GACTCGTATTTAGAGAAATTGCCCACTCTATTGCACCAGTGGGTAGGAATTTCTACAACGCCGACTTGCCATTCA TCAAGCTTTTCTGGATGGATTCCAATCTTGCCGTCCACGAATCTACTTTCGAGGCCCCGCGCGGAAACCCAGACG AGCCGGACTCGTTTCGCGAAAGCAGTATCTTGCGGTTAAGAAAGCGTTATGCTCCGACAATATGCGCTGGACCCA CCGATGACTTTGTTGTGGATGATTGGGATGAATCAGCGACAAAGCAAACGATTGTTCGTCGTTGCAAACCCCAAA TGGGCCGCGTTGATACAAGGTCGGACTTGCAGTGGACCCTGGACTTTTCTGGCGTCTACCAAATAGCGACAGGGA AAATGAAAATGGAAATCCATCCACAAAAGCAGACGAAGAGATTAATGCCCAAACCAAGGACATTTGATGCGTTAA TAGGGGACCTCCAAATCGAAATGGAGAATGGATCGGACCAACCTCCAGGCAAAACCATGGTTGAATTGACCGACA AGAAACTTCTGGCCGAGGGTCTTGATGAAAGAGCAGATGATCTGCAACGACTCATTTCAGCACTCGTCTCTAAAC AGCCGAACCCCAACGCGCAATGTCGATATATGTTTCTACCACTCCCATCACCGAACGGCAGTTATGGCATCCCGG CCAAACTCTCAGGCGAAGCAGATAACGATCTTTTAAATACATATGATCGAATCGTCGATGATTGGATGTCTACCC TGCCTCGCGCCATCCCCGTGCAGACCCGACTCATGAAAGAAAAAGTCATTCGGGGGGTTGCTGTCGATCTCATCC TTTCGCGCCTAGTAAAAATCTCTACCTCATTAGATAGCATCATACTGGCCAAGCCCACAGATCCTGTCGAGGACC AAGCAATTGAGAAGGCAAATGAAAAGGCCGCGACACAGAACAATTATCTGCAATCGAGCTACTTCTCATTATCAT CATCGCAGATCCCTGCAAGCCAATCATCAATGGCCAAAAGCCAAGTCTTTGGATCTGAACCAGACGCAATGCCAA TCCAGCAGTCCAAGTACACCGCAGTCCCGGTCTTGAGTGGTCTCTCAGCGTTCACCACATTCAAGACCCCACGTC CAGCACCACGAAACGTGACAAACCTCTTAGCGCACTGGTCGGTAGGAACCAACCCGGAAGACTATTCATGGGAGA GGATGGAAGACGAGGAAATGCGGGAGACGAGGGCACGCACACCCAGGAGCAGACGGAAGAAACGCCCACAGCCTC GTGACCAATCCCTCCCTGCGACTCCGGTAATTCCTATGATCCGGACATGGGACAGTCAGCCACTCGCACCTCCCC GACTCAACGTCGCCAGTAGTCAGCCCGCGATGGATGATGTGTCGATGACCCAGATGGAGCGGGGAGCTTTTGGAG CCCGACCACTCAAGAAGCCGAAACAGAAGAAGAAAAGAGCAGCTGGATTTTAG |