Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4626.t1
Gene name
Locationscaffold_10:12561..13806
Strand+
Gene length (bp)1245
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 1.7E-03 152 175
PF00400 WD40 WD domain, G-beta repeat 1.2E-01 189 218
PF00400 WD40 WD domain, G-beta repeat 7.8E-07 223 260

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4626.t1
MSKQYLSRGSADNAHIIDIFSLAITDKQILSTSGASSIKVHSTIDADFPLVQSIDGAHTIGCHHIVTNGNGSRAI
TAGFDGEIKVWSCQDGHWAADTKLTADLTNADAWAIAISEDGQYLAGVTQEGRINVWDLAADGTRIRDHETKGSF
GTCIDLSPDGRLIASGHEDGAVYIFTTETGRMPFSLSGLVNPVRAVAFSPKSKILAAAGDSKVIVLYDTSSGEQI
ANLSGHSAWILSLSWSDTGEYLLSSSFDGKVKVWSMETKTCVATHSETDKAVWNAKWLPKIGKTEGFATAGANRS
IAFYREATG*
Coding >Pro_DTO377G3_2|g4626.t1
ATGTCGAAACAATACCTCTCGAGGGGTTCTGCGGACAATGCGCACATTATTGATATCTTCTCGCTGGCTATAACC
GACAAGCAAATTCTATCAACATCGGGTGCCTCGTCCATCAAAGTGCATTCCACCATCGACGCTGACTTCCCGCTG
GTGCAGTCCATTGATGGTGCCCATACCATTGGCTGTCACCACATCGTGACCAATGGGAATGGCTCCCGTGCAATC
ACCGCTGGGTTTGATGGCGAAATCAAGGTCTGGTCTTGTCAGGATGGGCATTGGGCTGCAGACACCAAGCTGACT
GCCGACCTCACAAATGCCGATGCCTGGGCCATAGCTATTTCCGAAGATGGCCAATACCTTGCTGGTGTCACGCAA
GAGGGGCGCATTAATGTATGGGATTTGGCTGCCGATGGCACTCGGATTCGAGACCATGAGACCAAGGGCAGCTTT
GGTACTTGCATCGACTTGTCCCCCGATGGTCGGTTGATCGCTTCAGGCCACGAAGACGGCGCAGTCTATATCTTC
ACCACCGAAACAGGCCGCATGCCATTCTCTCTTTCAGGTTTGGTCAATCCTGTACGAGCTGTGGCTTTCTCGCCT
AAAAGCAAGATCCTAGCAGCTGCTGGCGACTCCAAGGTCATTGTGCTGTATGACACTTCCTCTGGTGAACAAATC
GCCAATCTCTCAGGGCACTCTGCCTGGATCTTGTCCCTTTCCTGGAGTGATACTGGCGAGTACCTTTTGAGCAGT
TCATTTGACGGCAAGGTCAAGGTTTGGTCTATGGAGACCAAGACATGTGTCGCTACACACTCAGAAACAGATAAA
GCCGTTTGGAACGCCAAGTGGCTTCCCAAGATCGGCAAGACAGAAGGGTTCGCCACCGCTGGCGCAAACCGCAGC
ATTGCATTCTACCGCGAGGCTACTGGGTAA
Transcript >Pro_DTO377G3_2|g4626.t1
ATGTCGAAACAATACCTCTCGAGGGGTTCTGCGGACAATGCGCACATTATTGATATCTTCTCGCTGGCTATAACC
GACAAGCAAATTCTATCAACATCGGGTGCCTCGTCCATCAAAGTGCATTCCACCATCGACGCTGACTTCCCGCTG
GTGCAGTCCATTGATGGTGCCCATACCATTGGCTGTCACCACATCGTGACCAATGGGAATGGCTCCCGTGCAATC
ACCGCTGGGTTTGATGGCGAAATCAAGGTCTGGTCTTGTCAGGATGGGCATTGGGCTGCAGACACCAAGCTGACT
GCCGACCTCACAAATGCCGATGCCTGGGCCATAGCTATTTCCGAAGATGGCCAATACCTTGCTGGTGTCACGCAA
GAGGGGCGCATTAATGTATGGGATTTGGCTGCCGATGGCACTCGGATTCGAGACCATGAGACCAAGGGCAGCTTT
GGTACTTGCATCGACTTGTCCCCCGATGGTCGGTTGATCGCTTCAGGCCACGAAGACGGCGCAGTCTATATCTTC
ACCACCGAAACAGGCCGCATGCCATTCTCTCTTTCAGGTTTGGTCAATCCTGTACGAGCTGTGGCTTTCTCGCCT
AAAAGCAAGATCCTAGCAGCTGCTGGCGACTCCAAGGTCATTGTGCTGTATGACACTTCCTCTGGTGAACAAATC
GCCAATCTCTCAGGGCACTCTGCCTGGATCTTGTCCCTTTCCTGGAGTGATACTGGCGAGTACCTTTTGAGCAGT
TCATTTGACGGCAAGGTCAAGGTTTGGTCTATGGAGACCAAGACATGTGTCGCTACACACTCAGAAACAGATAAA
GCCGTTTGGAACGCCAAGTGGCTTCCCAAGATCGGCAAGACAGAAGGGTTCGCCACCGCTGGCGCAAACCGCAGC
ATTGCATTCTACCGCGAGGCTACTGGGTAA
Gene >Pro_DTO377G3_2|g4626.t1
ATGGTAAGGTCAAATCAAAAATCAATAGATTTTATCGCTAAGGGACATTTTAGTCGAAACAATACCTCTCGAGGG
GTTCTGCGGACAATGGTGGGCTTCCCGATGCACATATATCCTGGGTGATTTGGCTAATATCTGTTTTATAGCGCA
CATTATTGATATCTTCTCGCTGGCTATAACCGACAAGCAAATTCTATCAACATCGGGTGCCTCGTCCATCAAAGT
GCATTCCACCATCGACGCTGACTTCCCGCTGGTGCAGTCCATTGATGGTGCCCATACCATTGGCTGTCACCACAT
CGTGACCAATGGGAATGGCTCCCGTGCAATCACCGCTGGGTTTGATGGCGAAATCAAGGTCTGGTCTTGTCAGGA
TGGGCATTGGGCTGCAGACACCAAGCTGACTGGTAAGAACTGCCCCTCTTTGATAGGCTACAGGGTGCAATACTA
ATAGCACCACAGCCGACCTCACAAATGCCGATGCCTGGGCCATAGCTATTTCCGAAGATGGCCAATACCTTGCTG
GTGTCACGCAAGAGGGGCGCATTAATGTATGGGATTTGGCTGCCGATGGCACTCGGATTCGAGACCATGAGACCA
AGGGCAGCTTTGGTACTTGCATCGACTTGGTGAGATTTCAAATGCAGCCAGATACTGGCCCCTGTTAACCTTGAC
GTCTAGTCCCCCGATGGTCGGTTGATCGCTTCAGGCCACGAAGACGGCGCAGTCTATATCTTCACCACCGAAACA
GGCCGCATGCCATTCTCTCTTTCAGGTAAGCGAAGTTGTCTGAGCCGAGCAGAAATACAAGTTCTAATTCGGCCT
AGGTTTGGTCAATCCTGTACGAGCTGTGGCTTTCTCGCCTAAAAGCAAGATCCTAGCAGCTGCTGGCGACTCCAA
GGTCATTGTGCTGTATGACACTTCCTCTGGTGAACAAATCGCCAATCTCTCAGGGCACTCTGCCTGGATCTTGTC
CCTTTCCTGGAGTGATACTGGCGAGTACCTTTTGAGCAGGTCAGTCAATATCCTATGCGTCTATACGCCGGCAAG
CTGACATTTTCAAGTTCATTTGACGGCAAGGTCAAGGTTTGGTCTATGGAGACCAAGACATGTGTCGCTACACAC
TCAGAAACAGATAAAGCCGTTTGGAACGCCAAGTGGCTTCCCAAGATCGGCAAGACAGAAGGGTTCGCCACCGCT
GGCGCAAACCGCAGCATTGCATTCTACCGCGAGGCTACTGGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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