Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4617.t1
Gene name
Locationscaffold_09:707678..708759
Strand-
Gene length (bp)1081
Transcript length (bp)846
Coding sequence length (bp)846
Protein length (aa) 282

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04893 Yip1 Yip1 domain 5.2E-08 162 276

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 165 182 17
2 187 209 22
3 222 244 22
4 259 280 21

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4617.t1
MATVYQGHPHDEPHDDESLLGDDLIEADDAIDADDPLHNTSDTAPLRGNIESSSANRGNSSGYGNYLTSSIGGED
RRAVQNTIDESVWETLSRDLVAVWEKMRQVLWPKYLLGGMMQRGGSGTADSEQGGVSGFGGNIRGLVGRWPDADV
VLQGGMSDGLRDWDLWGPLVFCLVLSLFLSVAKGDQSSVVFSGVFCLVWIGEAAVTLQIKLLGGKISFFQSICII
GYTLFPLVIAAMLIAWSLAAGVSILGGSGVVRNRVGIAVYPLFVFYIAIGCLCFIS*
Coding >Pro_DTO377G3_2|g4617.t1
ATGGCTACCGTATACCAAGGCCATCCCCATGATGAGCCCCATGATGACGAGTCTCTCCTTGGTGATGATTTGATC
GAAGCCGATGATGCCATCGACGCTGACGACCCCCTGCACAATACCTCCGACACGGCCCCTCTGCGAGGCAACATC
GAATCCAGCTCGGCCAACCGAGGCAATTCCTCTGGCTATGGCAACTATCTAACGTCCTCTATCGGTGGTGAGGAT
CGCCGTGCAGTGCAAAATACCATCGATGAGAGTGTTTGGGAGACATTGTCACGCGACTTGGTTGCCGTGTGGGAG
AAGATGCGCCAGGTGCTTTGGCCGAAGTACTTGCTCGGAGGAATGATGCAGCGCGGGGGCAGTGGTACCGCTGAT
TCCGAGCAAGGTGGAGTGTCTGGATTTGGTGGTAACATTCGGGGACTCGTTGGACGCTGGCCGGATGCCGACGTG
GTCCTGCAGGGTGGCATGAGCGATGGGTTGCGGGACTGGGATCTCTGGGGACCGCTTGTCTTTTGCCTGGTCCTG
AGTTTGTTCTTGTCCGTCGCAAAGGGTGATCAGTCGTCGGTGGTTTTCTCGGGCGTTTTCTGTCTTGTCTGGATC
GGAGAAGCTGCTGTGACTCTTCAGATCAAGCTTCTTGGTGGCAAGATTTCCTTTTTCCAGTCGATTTGCATTATC
GGATATACGCTCTTCCCCTTGGTCATCGCCGCGATGCTGATCGCATGGTCTTTAGCAGCCGGAGTAAGCATCTTG
GGAGGCTCGGGAGTGGTGCGGAACCGAGTCGGCATCGCAGTGTACCCGCTGTTTGTGTTCTACATTGCGATCGGG
TGTCTCTGTTTCATCAGTTAA
Transcript >Pro_DTO377G3_2|g4617.t1
ATGGCTACCGTATACCAAGGCCATCCCCATGATGAGCCCCATGATGACGAGTCTCTCCTTGGTGATGATTTGATC
GAAGCCGATGATGCCATCGACGCTGACGACCCCCTGCACAATACCTCCGACACGGCCCCTCTGCGAGGCAACATC
GAATCCAGCTCGGCCAACCGAGGCAATTCCTCTGGCTATGGCAACTATCTAACGTCCTCTATCGGTGGTGAGGAT
CGCCGTGCAGTGCAAAATACCATCGATGAGAGTGTTTGGGAGACATTGTCACGCGACTTGGTTGCCGTGTGGGAG
AAGATGCGCCAGGTGCTTTGGCCGAAGTACTTGCTCGGAGGAATGATGCAGCGCGGGGGCAGTGGTACCGCTGAT
TCCGAGCAAGGTGGAGTGTCTGGATTTGGTGGTAACATTCGGGGACTCGTTGGACGCTGGCCGGATGCCGACGTG
GTCCTGCAGGGTGGCATGAGCGATGGGTTGCGGGACTGGGATCTCTGGGGACCGCTTGTCTTTTGCCTGGTCCTG
AGTTTGTTCTTGTCCGTCGCAAAGGGTGATCAGTCGTCGGTGGTTTTCTCGGGCGTTTTCTGTCTTGTCTGGATC
GGAGAAGCTGCTGTGACTCTTCAGATCAAGCTTCTTGGTGGCAAGATTTCCTTTTTCCAGTCGATTTGCATTATC
GGATATACGCTCTTCCCCTTGGTCATCGCCGCGATGCTGATCGCATGGTCTTTAGCAGCCGGAGTAAGCATCTTG
GGAGGCTCGGGAGTGGTGCGGAACCGAGTCGGCATCGCAGTGTACCCGCTGTTTGTGTTCTACATTGCGATCGGG
TGTCTCTGTTTCATCAGTTAA
Gene >Pro_DTO377G3_2|g4617.t1
ATGGCTACCGTATACCAAGGCCATCCCCATGATGAGCCCCATGATGACGAGTCTCTCCTTGGTGATGATTTGATC
GAAGCCGATGATGGTGAGTATTTTTCTTTGCCCTCTTGATTACCACTGTATCCGCAAGATCCTAATTCGGTGTGA
TTCTAGCCATCGACGCTGACGACCCCCTGCACAATACCTCCGACACGGCCCCTCTGCGAGGCAACATCGAATCCA
GCTCGGCCAACCGAGGCAATTCCTCTGGCTATGGCAACTATCTAACGTCCTCTATCGGTGGTGAGGATCGCCGTG
CAGTGCAAAATACCATCGATGAGAGTGTTTGGGAGACATTGTCACGCGACTTGGTTGCCGTGTGGGAGAAGATGC
GCCAGGTGCTTTGGCCGAAGTACTTGCTCGGAGGAATGATGCAGCGCGGGGGCAGTGGTACCGCTGATTCCGAGC
AAGGTGGAGTGTCTGGATTTGGTGGTAACATTCGGGGACTCGTTGGACGCTGGCCGGATGCCGACGTGGTCCTGC
AGGGTGGCATGAGCGATGGGTTGCGGGACTGGGATCTCTGGTAAGCGAATTTACACACGGGAAGTCTGAAAAATA
CTAATAAGTACTCTAGGGGACCGCTTGTCTTTTGCCTGGTCCTGAGTTTGTTCTTGTCCGTCGCAAAGGGTGATC
AGTCGTCGGTGGTTTTCTCGGGCGTTTTCTGTCTTGTCTGGATCGGAGAAGCTGCTGTGACTCTTCAGATCAAGC
TTCTTGGTGGCAAGATGTAAGTTTTCTACGAATCATCTCCCAACATCGCAGTCTACTAACATTGCGGCCTGGGCG
TGTTAGTTCCTTTTTCCAGTCGATTTGCATTATCGGATATACGCTCTTCCCCTTGGTCATCGCCGCGATGCTGAG
TGCGTTAGGACTTCCTACCATTGCACGGATACCAGTATATCTTGTATTAGTCGCATGGTCTTTAGCAGCCGGAGT
AAGCATCTTGGGAGGCTCGGGAGTGGTGCGGAACCGAGTCGGCATCGCAGTGTACCCGCTGTTTGTGTTCTACAT
TGCGATCGGGTGTCTCTGTTTCATCAGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail