Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4589.t1
Gene name
Locationscaffold_09:621866..623287
Strand+
Gene length (bp)1421
Transcript length (bp)1365
Coding sequence length (bp)1365
Protein length (aa) 455

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03985 Paf1 Paf1 5.6E-47 1 447

GO

GO Term Description Terminal node
GO:0006368 transcription elongation from RNA polymerase II promoter Yes
GO:0016593 Cdc73/Paf1 complex Yes
GO:0016570 histone modification Yes
GO:0008150 biological_process No
GO:0032991 protein-containing complex No
GO:0008152 metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0005575 cellular_component No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0036211 protein modification process No
GO:0006354 DNA-templated transcription, elongation No
GO:0006725 cellular aromatic compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0019538 protein metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0016070 RNA metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:0044249 cellular biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0009987 cellular process No
GO:1901564 organonitrogen compound metabolic process No
GO:0140513 nuclear protein-containing complex No
GO:0044237 cellular metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008023 transcription elongation factor complex No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0043412 macromolecule modification No
GO:0046483 heterocycle metabolic process No
GO:0009058 biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4589.t1
MPPKFLDIPHEGLSRFLTPGFASNLARREEPNIEVDAEGGMPIDLVGIPGLHLGDESAIMAPENPQPMDPADLPL
LMTIEQLRNPAPRNTNVSFLRRTQHIGVDRSGGDGSRPAPIKTQPRIAKKGKPPVDDPKHVKKFIQKGFDIAYPK
SKHVGEDTDSHIRGLPPTKAELDAWANPVHPDNPKLKPVGFFPVMPDLEGFPDPGGYLQFKFDKAPLTAVGGKRD
KRMDVGILTPVAPEQRICQEHESKLNLHLTNPVLYAHPGPVPYDYQLFLPEKPQSVKNIDASMNLSNPNRDSEDL
YTNESAEGTKFHRYDRIRTYATSAQVFNTDQKDIALTLFKPKDGDTRQLAAYYYPISGKARLKPERARTIAQAGL
APTSTQQEETEERIDQMQVVMRDPNEAEIYKRALTRLRVDPKFASNMPPEPVAQEEEQSLDNGETEKPADEDTRM
SDDE*
Coding >Pro_DTO377G3_2|g4589.t1
ATGCCCCCCAAGTTCCTTGACATCCCACACGAGGGCTTGAGTCGCTTCCTCACCCCCGGGTTTGCCTCAAACCTG
GCACGCCGTGAGGAGCCTAACATTGAAGTCGATGCCGAAGGTGGAATGCCAATTGATCTAGTCGGTATTCCGGGG
TTACATTTGGGCGACGAGAGTGCTATTATGGCACCAGAGAACCCTCAGCCCATGGATCCCGCTGACCTTCCCCTT
CTCATGACTATTGAGCAACTCCGAAACCCTGCCCCTAGGAATACCAATGTCAGTTTCCTCCGCCGTACGCAACAT
ATCGGTGTCGACCGCAGTGGCGGAGATGGATCTCGCCCTGCACCTATTAAAACACAACCGCGCATTGCGAAGAAA
GGAAAGCCTCCTGTGGATGACCCGAAACATGTTAAGAAGTTCATTCAAAAAGGATTCGATATCGCCTACCCCAAG
AGCAAGCACGTCGGAGAGGACACTGATAGCCACATCCGTGGTCTTCCACCCACAAAGGCAGAACTTGATGCCTGG
GCTAATCCCGTCCACCCTGACAACCCGAAGCTGAAGCCAGTCGGGTTCTTCCCTGTGATGCCTGATCTGGAAGGG
TTCCCAGACCCTGGTGGTTACCTTCAATTCAAGTTTGATAAGGCGCCTTTAACAGCCGTCGGAGGCAAGCGGGAT
AAACGTATGGATGTTGGTATTCTGACACCAGTCGCGCCCGAGCAGCGTATTTGCCAGGAGCATGAATCCAAGCTG
AATCTTCACCTCACGAACCCTGTTCTTTACGCCCACCCAGGCCCAGTTCCTTATGACTACCAACTCTTCCTTCCA
GAGAAGCCACAGTCTGTTAAGAACATTGACGCAAGCATGAACCTGTCCAACCCGAACCGAGACAGCGAAGACCTA
TACACCAATGAGAGCGCCGAGGGCACCAAATTCCACCGTTATGATCGCATTCGCACTTACGCCACCAGTGCTCAG
GTCTTCAACACCGATCAAAAGGACATTGCATTGACGCTCTTCAAGCCCAAGGATGGAGACACCAGGCAACTGGCC
GCTTACTACTATCCAATCTCAGGCAAGGCCCGTCTCAAGCCGGAGCGCGCCCGCACGATTGCTCAGGCCGGTCTC
GCTCCCACTTCCACCCAACAAGAAGAGACCGAGGAACGGATTGACCAGATGCAAGTAGTTATGCGTGATCCCAAT
GAGGCTGAAATCTACAAGCGTGCCTTGACCCGTCTGCGCGTCGATCCAAAGTTTGCAAGCAATATGCCACCCGAG
CCCGTTGCCCAGGAGGAGGAGCAATCGTTGGATAACGGGGAGACAGAAAAGCCAGCCGATGAGGACACTCGCATG
AGCGATGACGAATAG
Transcript >Pro_DTO377G3_2|g4589.t1
ATGCCCCCCAAGTTCCTTGACATCCCACACGAGGGCTTGAGTCGCTTCCTCACCCCCGGGTTTGCCTCAAACCTG
GCACGCCGTGAGGAGCCTAACATTGAAGTCGATGCCGAAGGTGGAATGCCAATTGATCTAGTCGGTATTCCGGGG
TTACATTTGGGCGACGAGAGTGCTATTATGGCACCAGAGAACCCTCAGCCCATGGATCCCGCTGACCTTCCCCTT
CTCATGACTATTGAGCAACTCCGAAACCCTGCCCCTAGGAATACCAATGTCAGTTTCCTCCGCCGTACGCAACAT
ATCGGTGTCGACCGCAGTGGCGGAGATGGATCTCGCCCTGCACCTATTAAAACACAACCGCGCATTGCGAAGAAA
GGAAAGCCTCCTGTGGATGACCCGAAACATGTTAAGAAGTTCATTCAAAAAGGATTCGATATCGCCTACCCCAAG
AGCAAGCACGTCGGAGAGGACACTGATAGCCACATCCGTGGTCTTCCACCCACAAAGGCAGAACTTGATGCCTGG
GCTAATCCCGTCCACCCTGACAACCCGAAGCTGAAGCCAGTCGGGTTCTTCCCTGTGATGCCTGATCTGGAAGGG
TTCCCAGACCCTGGTGGTTACCTTCAATTCAAGTTTGATAAGGCGCCTTTAACAGCCGTCGGAGGCAAGCGGGAT
AAACGTATGGATGTTGGTATTCTGACACCAGTCGCGCCCGAGCAGCGTATTTGCCAGGAGCATGAATCCAAGCTG
AATCTTCACCTCACGAACCCTGTTCTTTACGCCCACCCAGGCCCAGTTCCTTATGACTACCAACTCTTCCTTCCA
GAGAAGCCACAGTCTGTTAAGAACATTGACGCAAGCATGAACCTGTCCAACCCGAACCGAGACAGCGAAGACCTA
TACACCAATGAGAGCGCCGAGGGCACCAAATTCCACCGTTATGATCGCATTCGCACTTACGCCACCAGTGCTCAG
GTCTTCAACACCGATCAAAAGGACATTGCATTGACGCTCTTCAAGCCCAAGGATGGAGACACCAGGCAACTGGCC
GCTTACTACTATCCAATCTCAGGCAAGGCCCGTCTCAAGCCGGAGCGCGCCCGCACGATTGCTCAGGCCGGTCTC
GCTCCCACTTCCACCCAACAAGAAGAGACCGAGGAACGGATTGACCAGATGCAAGTAGTTATGCGTGATCCCAAT
GAGGCTGAAATCTACAAGCGTGCCTTGACCCGTCTGCGCGTCGATCCAAAGTTTGCAAGCAATATGCCACCCGAG
CCCGTTGCCCAGGAGGAGGAGCAATCGTTGGATAACGGGGAGACAGAAAAGCCAGCCGATGAGGACACTCGCATG
AGCGATGACGAATAG
Gene >Pro_DTO377G3_2|g4589.t1
ATGCCCCCCAAGTTCCTTGACATCCCACACGAGGGCTTGAGTCGCTTCCTCACCCCCGGGTTTGCCTCAAACCTG
GCACGCCGTGAGGAGCCTAACATTGAAGTCGATGCCGAAGGTGGAATGCCAATTGATCTAGTCGGTATTCCGGGG
TTACATTTGGGCGACGAGAGTGGTATGTCAATGCAGAATCCCCTATCATTGCGTTGCTGCAACTAACATATCCAC
CAGCTATTATGGCACCAGAGAACCCTCAGCCCATGGATCCCGCTGACCTTCCCCTTCTCATGACTATTGAGCAAC
TCCGAAACCCTGCCCCTAGGAATACCAATGTCAGTTTCCTCCGCCGTACGCAACATATCGGTGTCGACCGCAGTG
GCGGAGATGGATCTCGCCCTGCACCTATTAAAACACAACCGCGCATTGCGAAGAAAGGAAAGCCTCCTGTGGATG
ACCCGAAACATGTTAAGAAGTTCATTCAAAAAGGATTCGATATCGCCTACCCCAAGAGCAAGCACGTCGGAGAGG
ACACTGATAGCCACATCCGTGGTCTTCCACCCACAAAGGCAGAACTTGATGCCTGGGCTAATCCCGTCCACCCTG
ACAACCCGAAGCTGAAGCCAGTCGGGTTCTTCCCTGTGATGCCTGATCTGGAAGGGTTCCCAGACCCTGGTGGTT
ACCTTCAATTCAAGTTTGATAAGGCGCCTTTAACAGCCGTCGGAGGCAAGCGGGATAAACGTATGGATGTTGGTA
TTCTGACACCAGTCGCGCCCGAGCAGCGTATTTGCCAGGAGCATGAATCCAAGCTGAATCTTCACCTCACGAACC
CTGTTCTTTACGCCCACCCAGGCCCAGTTCCTTATGACTACCAACTCTTCCTTCCAGAGAAGCCACAGTCTGTTA
AGAACATTGACGCAAGCATGAACCTGTCCAACCCGAACCGAGACAGCGAAGACCTATACACCAATGAGAGCGCCG
AGGGCACCAAATTCCACCGTTATGATCGCATTCGCACTTACGCCACCAGTGCTCAGGTCTTCAACACCGATCAAA
AGGACATTGCATTGACGCTCTTCAAGCCCAAGGATGGAGACACCAGGCAACTGGCCGCTTACTACTATCCAATCT
CAGGCAAGGCCCGTCTCAAGCCGGAGCGCGCCCGCACGATTGCTCAGGCCGGTCTCGCTCCCACTTCCACCCAAC
AAGAAGAGACCGAGGAACGGATTGACCAGATGCAAGTAGTTATGCGTGATCCCAATGAGGCTGAAATCTACAAGC
GTGCCTTGACCCGTCTGCGCGTCGATCCAAAGTTTGCAAGCAATATGCCACCCGAGCCCGTTGCCCAGGAGGAGG
AGCAATCGTTGGATAACGGGGAGACAGAAAAGCCAGCCGATGAGGACACTCGCATGAGCGATGACGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail