Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4581.t1
Gene name
Locationscaffold_09:608164..608644
Strand-
Gene length (bp)480
Transcript length (bp)480
Coding sequence length (bp)480
Protein length (aa) 160

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02502 LacAB_rpiB Ribose/Galactose Isomerase 1.9E-43 7 148

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0016853 isomerase activity Yes
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0071704 organic substance metabolic process No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4581.t1
MSTPFRIVMACDEAGVPYKDAIKATLEKNPLVAEIIDVGVNSSSDKTAYPHPAVEGAKLIMDGKADRGLFICGTG
LGVAIAANKVPGIRAVTAHDPFSVERSILSNDAQVLCMGQRVIGVELAKKLATDWLNYRFDPKSASAAKVQAITD
YEIQFHTAA*
Coding >Pro_DTO377G3_2|g4581.t1
ATGTCTACTCCTTTCCGCATCGTCATGGCCTGCGATGAGGCCGGTGTCCCATATAAGGATGCTATCAAGGCCACT
CTCGAGAAGAACCCTCTCGTCGCCGAGATCATTGATGTGGGTGTCAACTCATCCTCCGACAAGACTGCCTACCCA
CACCCTGCCGTCGAGGGTGCCAAGCTCATCATGGATGGCAAGGCTGATCGTGGCCTCTTCATTTGCGGAACTGGT
CTGGGTGTTGCCATCGCCGCGAACAAGGTGCCCGGCATTCGGGCTGTGACTGCCCACGATCCTTTCTCCGTTGAG
CGCTCCATCCTGAGCAACGACGCTCAAGTCCTATGCATGGGACAGCGTGTCATCGGTGTTGAATTAGCCAAGAAG
CTGGCTACCGACTGGCTAAACTACCGCTTCGACCCTAAGTCCGCCTCTGCTGCCAAGGTCCAAGCTATCACGGAC
TATGAGATCCAGTTCCATACTGCTGCTTAG
Transcript >Pro_DTO377G3_2|g4581.t1
ATGTCTACTCCTTTCCGCATCGTCATGGCCTGCGATGAGGCCGGTGTCCCATATAAGGATGCTATCAAGGCCACT
CTCGAGAAGAACCCTCTCGTCGCCGAGATCATTGATGTGGGTGTCAACTCATCCTCCGACAAGACTGCCTACCCA
CACCCTGCCGTCGAGGGTGCCAAGCTCATCATGGATGGCAAGGCTGATCGTGGCCTCTTCATTTGCGGAACTGGT
CTGGGTGTTGCCATCGCCGCGAACAAGGTGCCCGGCATTCGGGCTGTGACTGCCCACGATCCTTTCTCCGTTGAG
CGCTCCATCCTGAGCAACGACGCTCAAGTCCTATGCATGGGACAGCGTGTCATCGGTGTTGAATTAGCCAAGAAG
CTGGCTACCGACTGGCTAAACTACCGCTTCGACCCTAAGTCCGCCTCTGCTGCCAAGGTCCAAGCTATCACGGAC
TATGAGATCCAGTTCCATACTGCTGCTTAG
Gene >Pro_DTO377G3_2|g4581.t1
ATGTCTACTCCTTTCCGCATCGTCATGGCCTGCGATGAGGCCGGTGTCCCATATAAGGATGCTATCAAGGCCACT
CTCGAGAAGAACCCTCTCGTCGCCGAGATCATTGATGTGGGTGTCAACTCATCCTCCGACAAGACTGCCTACCCA
CACCCTGCCGTCGAGGGTGCCAAGCTCATCATGGATGGCAAGGCTGATCGTGGCCTCTTCATTTGCGGAACTGGT
CTGGGTGTTGCCATCGCCGCGAACAAGGTGCCCGGCATTCGGGCTGTGACTGCCCACGATCCTTTCTCCGTTGAG
CGCTCCATCCTGAGCAACGACGCTCAAGTCCTATGCATGGGACAGCGTGTCATCGGTGTTGAATTAGCCAAGAAG
CTGGCTACCGACTGGCTAAACTACCGCTTCGACCCTAAGTCCGCCTCTGCTGCCAAGGTCCAAGCTATCACGGAC
TATGAGATCCAGTTCCATACTGCTGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail