Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g4580.t1
Gene name
Location	scaffold_09:606558..607583
Strand	-
Gene length (bp)	1025
Transcript length (bp)	855
Coding sequence length (bp)	855
Protein length (aa)	285

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04564	U-box	U-box domain	1.1E-20	209	279
PF13414	TPR_11	TPR repeat	8.1E-07	9	45

GO

GO Term	Description	Terminal node
GO:0004842	ubiquitin-protein transferase activity	Yes
GO:0016567	protein ubiquitination	Yes
GO:0043170	macromolecule metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0006464	cellular protein modification process	No
GO:0140096	catalytic activity, acting on a protein	No
GO:0019787	ubiquitin-like protein transferase activity	No
GO:0016740	transferase activity	No
GO:0071704	organic substance metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0036211	protein modification process	No
GO:0003824	catalytic activity	No
GO:0044238	primary metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0009987	cellular process	No
GO:0008152	metabolic process	No
GO:0008150	biological_process	No
GO:0032446	protein modification by small protein conjugation	No
GO:0003674	molecular_function	No
GO:0044267	cellular protein metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0043412	macromolecule modification	No
GO:0070647	protein modification by small protein conjugation or removal	No
GO:0019538	protein metabolic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 43	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g4580.t1 MAQELKAKGNELYKSGDYSGAEDLYSQAIQKNPSDPTFFTNRAITRSKLAKWADVEHDARAAIEIYGLKNPVALK SYYYLAQALLGLQRPQEALDVASEAYQQSLAAKNAQSENLSQTVLRAKQQIWAARETSRVRQLNETLGSMEALIE ADVTRALAELQGRLERGEIGEIGFGEDQKALREDAETKVRHLREAFRVASKGEVQERVVPDYLIDGITFEIMHDP VITPSGVSFDRLGITKYVEKSGVDPLTRAPISVNDLRNNYALKAVCEEFLTHNGWAVDW*
Coding	>Pro_DTO377G3_2\|g4580.t1 ATGGCCCAAGAACTCAAAGCAAAGGGCAATGAGCTCTACAAATCTGGGGATTACAGCGGTGCCGAAGACTTGTAC TCCCAGGCAATCCAAAAGAACCCCAGTGACCCAACCTTCTTCACAAACCGCGCGATAACACGAAGCAAACTTGCC AAATGGGCCGACGTTGAACATGACGCGCGAGCCGCAATCGAGATATACGGTCTCAAGAACCCCGTCGCGCTCAAG AGCTACTACTACCTCGCACAGGCACTCCTAGGCCTCCAGCGCCCACAAGAAGCACTCGACGTCGCGTCCGAAGCT TACCAACAGAGTCTAGCAGCAAAGAATGCCCAATCAGAGAATCTGTCGCAGACGGTCCTGCGCGCGAAGCAGCAG ATCTGGGCTGCGCGGGAGACTTCTCGGGTGCGCCAGCTGAATGAGACACTGGGTTCTATGGAGGCGCTCATTGAG GCCGATGTGACGCGGGCGCTGGCGGAGTTGCAGGGTCGCTTGGAGCGCGGGGAGATTGGGGAGATTGGGTTCGGG GAGGACCAGAAGGCGCTGCGGGAGGATGCGGAGACTAAAGTTAGGCATTTGAGGGAGGCATTTCGAGTTGCTTCC AAGGGAGAGGTTCAGGAAAGGGTTGTTCCGGACTATCTCATTGATGGCATCACATTTGAGATCATGCATGATCCT GTCATTACACCGTCCGGGGTCAGTTTCGATCGCTTGGGCATCACCAAGTATGTCGAGAAGTCGGGCGTCGATCCT TTGACTCGGGCTCCTATCAGTGTCAATGATCTGCGGAACAACTATGCCCTCAAGGCAGTTTGTGAGGAATTCCTC ACCCACAATGGATGGGCGGTGGATTGGTGA
Transcript	>Pro_DTO377G3_2\|g4580.t1 ATGGCCCAAGAACTCAAAGCAAAGGGCAATGAGCTCTACAAATCTGGGGATTACAGCGGTGCCGAAGACTTGTAC TCCCAGGCAATCCAAAAGAACCCCAGTGACCCAACCTTCTTCACAAACCGCGCGATAACACGAAGCAAACTTGCC AAATGGGCCGACGTTGAACATGACGCGCGAGCCGCAATCGAGATATACGGTCTCAAGAACCCCGTCGCGCTCAAG AGCTACTACTACCTCGCACAGGCACTCCTAGGCCTCCAGCGCCCACAAGAAGCACTCGACGTCGCGTCCGAAGCT TACCAACAGAGTCTAGCAGCAAAGAATGCCCAATCAGAGAATCTGTCGCAGACGGTCCTGCGCGCGAAGCAGCAG ATCTGGGCTGCGCGGGAGACTTCTCGGGTGCGCCAGCTGAATGAGACACTGGGTTCTATGGAGGCGCTCATTGAG GCCGATGTGACGCGGGCGCTGGCGGAGTTGCAGGGTCGCTTGGAGCGCGGGGAGATTGGGGAGATTGGGTTCGGG GAGGACCAGAAGGCGCTGCGGGAGGATGCGGAGACTAAAGTTAGGCATTTGAGGGAGGCATTTCGAGTTGCTTCC AAGGGAGAGGTTCAGGAAAGGGTTGTTCCGGACTATCTCATTGATGGCATCACATTTGAGATCATGCATGATCCT GTCATTACACCGTCCGGGGTCAGTTTCGATCGCTTGGGCATCACCAAGTATGTCGAGAAGTCGGGCGTCGATCCT TTGACTCGGGCTCCTATCAGTGTCAATGATCTGCGGAACAACTATGCCCTCAAGGCAGTTTGTGAGGAATTCCTC ACCCACAATGGATGGGCGGTGGATTGGTGA
Gene	>Pro_DTO377G3_2\|g4580.t1 ATGGCCCAAGAACTCAAAGCAAAGGGCAATGAGCTCTACAAATCTGGGGATTACAGCGGTGCCGAAGACTTGTAC TCCCAGGCGTAAGCTATCACATTTAACCCCTCCAACACTTCCCCTCACTCCCAACCAAAGTCGCAAACCCAACGA TCATTCAAATGTCCCCAAACTAACAAAATCCCCTCATTAAACAGAATCCAAAAGAACCCCAGTGACCCAACCTTC TTCACAAACCGCGCGATAACACGAAGCAAACTTGCCAAATGGGCCGACGTTGAACATGACGCGCGAGCCGCAATC GAGATATACGGTCTCAAGAACCCCGTCGCGCTCAAGAGCTACTACTACCTCGCACAGGCACTCCTAGGCCTCCAG CGCCCACAAGAAGCACTCGACGTCGCGTCCGAAGCTTACCAACAGAGTCTAGCAGCAAAGAATGCCCAATCAGAG AATCTGTCGCAGACGGTCCTGCGCGCGAAGCAGCAGATCTGGGCTGCGCGGGAGACTTCTCGGGTGCGCCAGCTG AATGAGACACTGGGTTCTATGGAGGCGCTCATTGAGGCCGATGTGACGCGGGCGCTGGCGGAGTTGCAGGGTCGC TTGGAGCGCGGGGAGATTGGGGAGATTGGGTTCGGGGAGGACCAGAAGGCGCTGCGGGAGGATGCGGAGACTAAA GTTAGGCATTTGAGGGAGGCATTTCGAGTTGCTTCCAAGGGAGAGGTTCAGGAAAGGGTAGGTTTTGAACTTGGT TCTTCGATGAGGTGGTTGTTGACGTTTGGGTTTGCTTCCAGGTTGTTCCGGACTATCTCATTGATGGCATCACAT TTGAGATCATGCATGATCCTGTCATTACACCGTCCGGGGTCAGTTTCGATCGCTTGGGCATCACCAAGTATGTCG AGAAGTCGGGCGTCGATCCTTTGACTCGGGCTCCTATCAGTGTCAATGATCTGCGGAACAACTATGCCCTCAAGG CAGTTTGTGAGGAATTCCTCACCCACAATGGATGGGCGGTGGATTGGTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences