Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4578.t1
Gene name
Locationscaffold_09:603407..605323
Strand+
Gene length (bp)1916
Transcript length (bp)1698
Coding sequence length (bp)1698
Protein length (aa) 566

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06087 Tyr-DNA_phospho Tyrosyl-DNA phosphodiesterase 1.8E-174 66 541

GO

GO Term Description Terminal node
GO:0006281 DNA repair Yes
GO:0008081 phosphoric diester hydrolase activity Yes
GO:0005634 nucleus Yes
GO:0006725 cellular aromatic compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0043227 membrane-bounded organelle No
GO:0008152 metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0042578 phosphoric ester hydrolase activity No
GO:0005575 cellular_component No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0008150 biological_process No
GO:0006259 DNA metabolic process No
GO:0033554 cellular response to stress No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0003824 catalytic activity No
GO:0043229 intracellular organelle No
GO:0044238 primary metabolic process No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:0043231 intracellular membrane-bounded organelle No
GO:0006950 response to stress No
GO:0006974 cellular response to DNA damage stimulus No
GO:0016787 hydrolase activity No
GO:0050896 response to stimulus No
GO:0110165 cellular anatomical entity No
GO:0043226 organelle No
GO:0090304 nucleic acid metabolic process No
GO:0044237 cellular metabolic process No
GO:0051716 cellular response to stimulus No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0009987 cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4578.t1
MERPSKRAKILSDSDDGSASTALTSLQRTISPPLPRGCPELTDGKLTSDTGDTGGTARPPKLVNSPVQLTHIRDL
PDGNNVDTIRLRDILGDPMIRECWQFNYLFDVDFLMSQLDEDVRSLVQVKVVHGSWRREDTNRIRIEEACSRYPN
VEPIVAYMPEPFGTHHSKMMILLRHDDLAQVIIHTANMIHMDWTNMTQAAWRSPLLPLQKTSSARSQTDTKIGSG
ARFKRDLLTYLKAYGPKKTGPLVQQLDSYDFGSIRAALIASVPSKKHVSDSSSEEDTLWGWPALKDLMSQIPIQQ
KNTGKKPHIVIQISSVATLGQTNKWLKDVFFKALTPTQTPKPTTYSIIFPTPDEIRRSLDGYNSGGSIHMKTQSA
TQQKQLQYMRPHLCQWAGDTLAPGQCVDLSEDNPPKREAGRARAAPHIKTYIRFGDSDMKTIDWAMVSSANLSTQ
AWGAATNASGEVRICSWEIGVVIWPDLFRDGGCGDAASASESRAEEKSPMPDMLMVPCFRRDCPSVSEGAETASV
VVGFRMPYDLPLTPYGAGDEPWCATASHALPDWRGESWIA*
Coding >Pro_DTO377G3_2|g4578.t1
ATGGAGCGCCCGTCCAAAAGAGCCAAAATCTTATCAGATTCCGATGATGGCTCAGCGAGTACAGCCTTGACGTCT
TTGCAAAGGACCATTAGCCCACCATTGCCACGAGGCTGCCCCGAACTGACTGATGGGAAATTGACTTCTGACACT
GGAGACACTGGAGGCACTGCTCGCCCTCCCAAGTTGGTCAATTCGCCAGTACAACTTACCCATATTCGAGATCTA
CCGGATGGTAACAATGTCGACACCATCCGACTACGTGATATTCTCGGAGATCCCATGATTCGCGAATGCTGGCAG
TTCAATTACCTCTTTGATGTGGATTTTCTCATGTCGCAGCTCGACGAGGATGTCCGCAGTCTGGTGCAAGTCAAG
GTTGTGCATGGATCGTGGCGAAGGGAGGATACGAATCGGATTCGAATTGAAGAGGCCTGTTCGCGATATCCTAAT
GTTGAGCCTATTGTGGCCTACATGCCGGAGCCTTTCGGGACACATCATTCCAAGATGATGATTCTTCTTCGGCAT
GATGACCTAGCTCAAGTTATCATTCACACGGCAAACATGATCCATATGGATTGGACTAATATGACACAAGCCGCC
TGGCGCTCCCCATTGCTTCCCCTGCAGAAGACAAGCTCAGCACGATCTCAGACAGACACCAAAATTGGCTCGGGA
GCACGGTTCAAAAGGGATCTCCTCACTTATCTGAAAGCGTATGGACCTAAAAAGACCGGCCCGCTGGTCCAGCAG
TTGGATAGCTACGACTTCGGCTCTATTCGCGCCGCCCTCATTGCTAGTGTTCCGTCCAAAAAGCACGTCAGTGAC
TCCAGCTCAGAAGAGGATACACTATGGGGCTGGCCTGCTCTGAAAGACTTAATGAGCCAGATACCCATCCAGCAG
AAAAACACAGGCAAGAAACCACACATAGTAATCCAGATCTCTTCAGTAGCAACCCTCGGCCAAACAAACAAATGG
CTCAAAGACGTGTTCTTCAAAGCCCTCACCCCAACCCAAACCCCCAAACCAACAACCTACTCAATAATCTTCCCA
ACCCCAGACGAAATCCGCCGCTCCTTAGACGGCTACAACTCCGGCGGCTCAATCCACATGAAAACCCAAAGCGCA
ACACAACAAAAGCAACTCCAATACATGCGTCCGCATCTCTGCCAATGGGCAGGTGACACCCTCGCCCCAGGCCAA
TGCGTCGATCTATCCGAAGACAATCCCCCAAAGCGCGAAGCAGGCCGCGCCCGCGCAGCCCCGCACATCAAGACT
TACATCCGCTTTGGGGACTCGGACATGAAGACCATCGACTGGGCGATGGTGTCATCGGCGAATCTGTCTACGCAG
GCGTGGGGCGCGGCGACGAATGCGAGTGGCGAGGTGCGCATTTGTAGCTGGGAGATTGGCGTTGTTATTTGGCCG
GATCTTTTCCGAGATGGGGGCTGTGGCGATGCTGCATCTGCATCTGAATCCCGAGCGGAAGAGAAATCCCCGATG
CCAGACATGCTGATGGTTCCTTGCTTTAGGCGAGATTGTCCTTCTGTGTCTGAGGGCGCTGAGACGGCTTCGGTG
GTCGTCGGGTTCCGGATGCCTTATGATCTGCCATTGACGCCGTATGGTGCGGGTGATGAGCCGTGGTGCGCGACT
GCTTCGCATGCTCTACCGGACTGGCGAGGGGAGAGTTGGATTGCTTGA
Transcript >Pro_DTO377G3_2|g4578.t1
ATGGAGCGCCCGTCCAAAAGAGCCAAAATCTTATCAGATTCCGATGATGGCTCAGCGAGTACAGCCTTGACGTCT
TTGCAAAGGACCATTAGCCCACCATTGCCACGAGGCTGCCCCGAACTGACTGATGGGAAATTGACTTCTGACACT
GGAGACACTGGAGGCACTGCTCGCCCTCCCAAGTTGGTCAATTCGCCAGTACAACTTACCCATATTCGAGATCTA
CCGGATGGTAACAATGTCGACACCATCCGACTACGTGATATTCTCGGAGATCCCATGATTCGCGAATGCTGGCAG
TTCAATTACCTCTTTGATGTGGATTTTCTCATGTCGCAGCTCGACGAGGATGTCCGCAGTCTGGTGCAAGTCAAG
GTTGTGCATGGATCGTGGCGAAGGGAGGATACGAATCGGATTCGAATTGAAGAGGCCTGTTCGCGATATCCTAAT
GTTGAGCCTATTGTGGCCTACATGCCGGAGCCTTTCGGGACACATCATTCCAAGATGATGATTCTTCTTCGGCAT
GATGACCTAGCTCAAGTTATCATTCACACGGCAAACATGATCCATATGGATTGGACTAATATGACACAAGCCGCC
TGGCGCTCCCCATTGCTTCCCCTGCAGAAGACAAGCTCAGCACGATCTCAGACAGACACCAAAATTGGCTCGGGA
GCACGGTTCAAAAGGGATCTCCTCACTTATCTGAAAGCGTATGGACCTAAAAAGACCGGCCCGCTGGTCCAGCAG
TTGGATAGCTACGACTTCGGCTCTATTCGCGCCGCCCTCATTGCTAGTGTTCCGTCCAAAAAGCACGTCAGTGAC
TCCAGCTCAGAAGAGGATACACTATGGGGCTGGCCTGCTCTGAAAGACTTAATGAGCCAGATACCCATCCAGCAG
AAAAACACAGGCAAGAAACCACACATAGTAATCCAGATCTCTTCAGTAGCAACCCTCGGCCAAACAAACAAATGG
CTCAAAGACGTGTTCTTCAAAGCCCTCACCCCAACCCAAACCCCCAAACCAACAACCTACTCAATAATCTTCCCA
ACCCCAGACGAAATCCGCCGCTCCTTAGACGGCTACAACTCCGGCGGCTCAATCCACATGAAAACCCAAAGCGCA
ACACAACAAAAGCAACTCCAATACATGCGTCCGCATCTCTGCCAATGGGCAGGTGACACCCTCGCCCCAGGCCAA
TGCGTCGATCTATCCGAAGACAATCCCCCAAAGCGCGAAGCAGGCCGCGCCCGCGCAGCCCCGCACATCAAGACT
TACATCCGCTTTGGGGACTCGGACATGAAGACCATCGACTGGGCGATGGTGTCATCGGCGAATCTGTCTACGCAG
GCGTGGGGCGCGGCGACGAATGCGAGTGGCGAGGTGCGCATTTGTAGCTGGGAGATTGGCGTTGTTATTTGGCCG
GATCTTTTCCGAGATGGGGGCTGTGGCGATGCTGCATCTGCATCTGAATCCCGAGCGGAAGAGAAATCCCCGATG
CCAGACATGCTGATGGTTCCTTGCTTTAGGCGAGATTGTCCTTCTGTGTCTGAGGGCGCTGAGACGGCTTCGGTG
GTCGTCGGGTTCCGGATGCCTTATGATCTGCCATTGACGCCGTATGGTGCGGGTGATGAGCCGTGGTGCGCGACT
GCTTCGCATGCTCTACCGGACTGGCGAGGGGAGAGTTGGATTGCTTGA
Gene >Pro_DTO377G3_2|g4578.t1
ATGGAGCGCCCGTCCAAAAGAGCCAAAATCTTATCAGATTCCGATGATGGCTCAGCGAGTACAGCCTTGACGTCT
TTGCAAAGGACCATTAGCCCACCATTGCCACGAGGCTGCCCCGAACTGACTGATGGGAAATTGACTTCTGACACT
GGAGACACTGGAGGCACTGCTCGCCCTCCCAAGTTGGTCAATTCGCCAGTACAACTTACCCATATTCGAGATCTA
CCGGATGGTAACAATGTCGACACCATCCGACTACGTGATATTCTCGGAGATCCCATGATTCGCGAATGCTGGCAG
TTCAATTACCTCTTTGATGTGGATTTTCTCATGTCGCAGCTCGACGAGGATGTCCGCAGTCTGGTGCAAGTCAAG
GTTGTGCATGGATCGTGGCGAAGGGAGGATACGAATCGGATTCGAATTGAAGTAAGTTTGCACCGACGTGACTTG
ATCGGGTTGGCTTTGTCTTTTGAATACGTCTCACCATTGATCGAGGGTTTGAAGTGACGACTAATCTGCTTCTAG
GAGGCCTGTTCGCGATATCCTAATGTTGAGCCTATTGTGGCCTACATGCCGGAGCCTTTCGGGACACATCATTCC
AAGATGATGATTCTTCTTCGGCATGATGACCTAGCTCAGTAAGATTCTTGCACACATTTTTGATCGCTATAGCCC
GATATAGGTCTGACTGAATTACCAAACAGAGTTATCATTCACACGGCAAACATGATCCATATGGATTGGACTAAT
ATGACACAAGCCGCCTGGCGCTCCCCATTGCTTCCCCTGCAGAAGACAAGCTCAGCACGATCTCAGACAGACACC
AAAATTGGCTCGGGAGCACGGTTCAAAAGGGATCTCCTCACTTATCTGAAAGCGTATGGACCTAAAAAGACCGGC
CCGCTGGTCCAGCAGTTGGATAGCTACGACTTCGGCTCTATTCGCGCCGCCCTCATTGCTAGTGTTCCGTCCAAA
AAGCACGTCAGTGACTCCAGCTCAGAAGAGGATACACTATGGGGCTGGCCTGCTCTGAAAGACTTAATGAGCCAG
ATACCCATCCAGCAGAAAAACACAGGCAAGAAACCACACATAGTAATCCAGGTGCGTATCTCCACAAAATCATCA
TGCTGTAATAAATCTCCAACATATCCAAGATCTCTTCAGTAGCAACCCTCGGCCAAACAAACAAATGGCTCAAAG
ACGTGTTCTTCAAAGCCCTCACCCCAACCCAAACCCCCAAACCAACAACCTACTCAATAATCTTCCCAACCCCAG
ACGAAATCCGCCGCTCCTTAGACGGCTACAACTCCGGCGGCTCAATCCACATGAAAACCCAAAGCGCAACACAAC
AAAAGCAACTCCAATACATGCGTCCGCATCTCTGCCAATGGGCAGGTGACACCCTCGCCCCAGGCCAATGCGTCG
ATCTATCCGAAGACAATCCCCCAAAGCGCGAAGCAGGCCGCGCCCGCGCAGCCCCGCACATCAAGACTTACATCC
GCTTTGGGGACTCGGACATGAAGACCATCGACTGGGCGATGGTGTCATCGGCGAATCTGTCTACGCAGGCGTGGG
GCGCGGCGACGAATGCGAGTGGCGAGGTGCGCATTTGTAGCTGGGAGATTGGCGTTGTTATTTGGCCGGATCTTT
TCCGAGATGGGGGCTGTGGCGATGCTGCATCTGCATCTGAATCCCGAGCGGAAGAGAAATCCCCGATGCCAGACA
TGCTGATGGTTCCTTGCTTTAGGCGAGATTGTCCTTCTGTGTCTGAGGGCGCTGAGACGGCTTCGGTGGTCGTCG
GGTTCCGGATGCCTTATGATCTGCCATTGACGCCGTATGGTGCGGGTGATGAGCCGTGGTGCGCGACTGCTTCGC
ATGCTCTACCGGACTGGCGAGGGGAGAGTTGGATTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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