Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4577.t1
Gene name
Locationscaffold_09:601881..603088
Strand+
Gene length (bp)1207
Transcript length (bp)1098
Coding sequence length (bp)1098
Protein length (aa) 366

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00180 Iso_dh Isocitrate/isopropylmalate dehydrogenase 2.2E-83 13 355

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4577.t1
MSPPVASQKTYSIASIPADGIGPEVISAGITALNALTDTLKTFKLEFKNYDWSSETYKKTGKYIPDGGLEELKKH
DAIFFGAVGAPDVPDHISLWGLRLAICQPFQQYANVRPTRVFRGTESPLRKCGPNDLDWVIIRENSEGEYAGQGG
RSHTGKPWEVATEVSIFSRHGVERIMRFAFETAQKRPRKLLTVVTKSNAQRNGMVLWDEVAKIVAVDFPNVTVDK
MLVDAMTTRMVLKPESLDTIVATNLHADILSDLAASLAGSIGIAPTSNLDPTREYPSMFEPIHGSAFDITGMGIS
NPVATFWTASEMLAWLGEEEAAKQLLVCVENVCEQGVLTRDLGGDATTKQVTDAVVAEIKKLAAQ*
Coding >Pro_DTO377G3_2|g4577.t1
ATGTCTCCACCAGTCGCTAGTCAAAAGACCTACAGCATCGCATCCATCCCAGCCGATGGAATTGGCCCAGAGGTT
ATCAGTGCTGGTATCACAGCTCTGAATGCCTTGACCGATACTCTCAAGACGTTCAAGTTGGAGTTCAAGAACTAT
GATTGGAGCTCCGAGACGTACAAGAAGACCGGCAAATACATCCCCGATGGTGGACTCGAGGAGCTCAAGAAGCAC
GACGCGATTTTCTTCGGCGCCGTCGGCGCTCCTGACGTCCCGGATCATATTTCCTTGTGGGGACTGAGACTCGCC
ATCTGCCAGCCGTTCCAGCAGTATGCGAACGTGCGCCCAACACGGGTATTCCGCGGCACCGAGTCCCCGTTGCGC
AAGTGCGGACCCAATGACCTTGACTGGGTTATCATCCGTGAGAACAGCGAGGGAGAGTATGCGGGTCAGGGTGGC
CGTTCTCACACCGGAAAACCGTGGGAGGTCGCGACTGAAGTTTCTATCTTCTCCCGTCACGGTGTGGAGAGGATT
ATGCGGTTTGCCTTTGAGACTGCTCAGAAGCGGCCGCGCAAGCTGTTGACGGTGGTCACTAAGAGCAATGCCCAG
CGCAACGGTATGGTTCTCTGGGATGAAGTGGCAAAGATTGTTGCGGTTGATTTCCCCAATGTCACTGTGGACAAG
ATGCTTGTTGATGCTATGACTACTCGCATGGTTCTGAAGCCCGAGAGTCTGGATACCATCGTTGCTACCAATTTG
CACGCTGATATCCTCTCTGATCTCGCTGCCTCTCTGGCTGGATCTATTGGTATCGCACCTACCTCTAACCTCGAC
CCTACACGGGAGTATCCTAGTATGTTCGAGCCCATTCACGGCTCCGCTTTTGATATCACTGGCATGGGTATCTCC
AACCCCGTGGCTACGTTCTGGACGGCTTCGGAGATGCTTGCTTGGCTCGGCGAGGAGGAGGCTGCTAAGCAGCTG
CTGGTCTGTGTCGAAAATGTCTGCGAGCAGGGAGTTCTTACCCGTGATTTGGGTGGTGACGCCACGACGAAGCAG
GTCACTGATGCAGTTGTGGCGGAGATTAAGAAGCTTGCGGCTCAATAA
Transcript >Pro_DTO377G3_2|g4577.t1
ATGTCTCCACCAGTCGCTAGTCAAAAGACCTACAGCATCGCATCCATCCCAGCCGATGGAATTGGCCCAGAGGTT
ATCAGTGCTGGTATCACAGCTCTGAATGCCTTGACCGATACTCTCAAGACGTTCAAGTTGGAGTTCAAGAACTAT
GATTGGAGCTCCGAGACGTACAAGAAGACCGGCAAATACATCCCCGATGGTGGACTCGAGGAGCTCAAGAAGCAC
GACGCGATTTTCTTCGGCGCCGTCGGCGCTCCTGACGTCCCGGATCATATTTCCTTGTGGGGACTGAGACTCGCC
ATCTGCCAGCCGTTCCAGCAGTATGCGAACGTGCGCCCAACACGGGTATTCCGCGGCACCGAGTCCCCGTTGCGC
AAGTGCGGACCCAATGACCTTGACTGGGTTATCATCCGTGAGAACAGCGAGGGAGAGTATGCGGGTCAGGGTGGC
CGTTCTCACACCGGAAAACCGTGGGAGGTCGCGACTGAAGTTTCTATCTTCTCCCGTCACGGTGTGGAGAGGATT
ATGCGGTTTGCCTTTGAGACTGCTCAGAAGCGGCCGCGCAAGCTGTTGACGGTGGTCACTAAGAGCAATGCCCAG
CGCAACGGTATGGTTCTCTGGGATGAAGTGGCAAAGATTGTTGCGGTTGATTTCCCCAATGTCACTGTGGACAAG
ATGCTTGTTGATGCTATGACTACTCGCATGGTTCTGAAGCCCGAGAGTCTGGATACCATCGTTGCTACCAATTTG
CACGCTGATATCCTCTCTGATCTCGCTGCCTCTCTGGCTGGATCTATTGGTATCGCACCTACCTCTAACCTCGAC
CCTACACGGGAGTATCCTAGTATGTTCGAGCCCATTCACGGCTCCGCTTTTGATATCACTGGCATGGGTATCTCC
AACCCCGTGGCTACGTTCTGGACGGCTTCGGAGATGCTTGCTTGGCTCGGCGAGGAGGAGGCTGCTAAGCAGCTG
CTGGTCTGTGTCGAAAATGTCTGCGAGCAGGGAGTTCTTACCCGTGATTTGGGTGGTGACGCCACGACGAAGCAG
GTCACTGATGCAGTTGTGGCGGAGATTAAGAAGCTTGCGGCTCAATAA
Gene >Pro_DTO377G3_2|g4577.t1
ATGTCTCCACCAGTCGCTAGTCAAAAGACCTACAGCATCGCATCCATCCCAGCCGATGGAATTGGCCCAGAGGTT
ATCAGTGCTGGTATCACAGCTCTGAATGCCTTGACCGATACTCTCAAGACGTTCAAGTTGGAGTTCAAGAACTAT
GATTGGAGCTCCGAGACGTACAAGAAGACCGGCAAATACATCCCCGATGGTGGACTCGAGGAGCTCAAGAAGCAC
GACGCGATTTTCTTCGGCGCCGTCGGCGCTCCTGGTAAGCAGACACAATCAATGCCTTGAAGACATTATACTAAA
CACCAGAGAAGACGTCCCGGATCATATTTCCTTGTGGGGACTGAGACTCGCCATCTGCCAGCCGTTCCAGCAGTA
TGCGAACGTGCGCCCAACACGGGTATTCCGCGGCACCGAGTCCCCGTTGCGCAAGTGCGGACCCAATGACCTTGA
CTGGGTTATCATCCGTGAGAACAGCGAGGGAGAGTATGCGGGTCAGGGTGGCCGTTCTCACACCGGAAAACCGTG
GGAGGTCGCGACTGAAGTTTCTATCTTCTCCCGTCACGGTGTGGAGAGGATTATGCGGTTTGCCTTTGAGACTGC
TCAGAAGCGGCCGCGCAAGCTGTTGACGGTGGTCACTAAGAGCAATGCCCAGCGCAACGGTATGGTTCTCTGGGA
TGAAGTGGCAAAGATTGTTGCGGTTGATTTCCCCAATGTCACTGTGGACAAGATGCTTGTTGATGCTATGACTAC
TCGCATGGTTCTGAAGCCCGAGAGTCTGGATACCATCGTTGCTACCAATTTGGTGAGTTGCCGATATAGAATGAG
GCATAAATAGGTCTGTGGACTGACGATCAACTAGCACGCTGATATCCTCTCTGATCTCGCTGCCTCTCTGGCTGG
ATCTATTGGTATCGCACCTACCTCTAACCTCGACCCTACACGGGAGTATCCTAGTATGTTCGAGCCCATTCACGG
CTCCGCTTTTGATATCACTGGCATGGGTATCTCCAACCCCGTGGCTACGTTCTGGACGGCTTCGGAGATGCTTGC
TTGGCTCGGCGAGGAGGAGGCTGCTAAGCAGCTGCTGGTCTGTGTCGAAAATGTCTGCGAGCAGGGAGTTCTTAC
CCGTGATTTGGGTGGTGACGCCACGACGAAGCAGGTCACTGATGCAGTTGTGGCGGAGATTAAGAAGCTTGCGGC
TCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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