Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g4550.t1
Gene name
Location	scaffold_09:528118..529635
Strand	+
Gene length (bp)	1517
Transcript length (bp)	1410
Coding sequence length (bp)	1410
Protein length (aa)	470

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06068	TIP49	TIP49 P-loop domain	3.2E-153	20	361
PF17856	TIP49_C	TIP49 AAA-lid domain	1.1E-20	368	433
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	1.1E-05	72	122
PF05496	RuvB_N	Holliday junction DNA helicase RuvB P-loop domain	8.3E-05	43	100
PF03796	DnaB_C	DnaB-like helicase C terminal domain	6.6E-06	65	178

GO

GO Term	Description	Terminal node
GO:0003678	DNA helicase activity	Yes
GO:0006310	DNA recombination	Yes
GO:0006260	DNA replication	Yes
GO:0006281	DNA repair	Yes
GO:0009378	four-way junction helicase activity	Yes
GO:0005524	ATP binding	Yes
GO:0009987	cellular process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0043168	anion binding	No
GO:0004386	helicase activity	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0044238	primary metabolic process	No
GO:0003824	catalytic activity	No
GO:0006950	response to stress	No
GO:0033554	cellular response to stress	No
GO:0044260	cellular macromolecule metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0032553	ribonucleotide binding	No
GO:0071704	organic substance metabolic process	No
GO:0016462	pyrophosphatase activity	No
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	No
GO:0097159	organic cyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:0036094	small molecule binding	No
GO:1901363	heterocyclic compound binding	No
GO:0090304	nucleic acid metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:0034645	cellular macromolecule biosynthetic process	No
GO:0008150	biological_process	No
GO:0005488	binding	No
GO:0006259	DNA metabolic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0009058	biosynthetic process	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0043167	ion binding	No
GO:0006807	nitrogen compound metabolic process	No
GO:0000166	nucleotide binding	No
GO:0003674	molecular_function	No
GO:0008144	drug binding	No
GO:0051716	cellular response to stimulus	No
GO:0016817	hydrolase activity, acting on acid anhydrides	No
GO:0050896	response to stimulus	No
GO:0140097	catalytic activity, acting on DNA	No
GO:1901576	organic substance biosynthetic process	No
GO:0016787	hydrolase activity	No
GO:0008152	metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0009059	macromolecule biosynthetic process	No
GO:0030554	adenyl nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0017076	purine nucleotide binding	No
GO:1901265	nucleoside phosphate binding	No
GO:0017111	nucleoside-triphosphatase activity	No
GO:0006974	cellular response to DNA damage stimulus	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g4550.t1 MAVPISTVAESKELRGLNLIAAHSHIRGLGVDADTLQPRASSQGLVGQEKARKAAAVILQMVREGKIAGRAVLIA GPPSTGKTAIAMGMAQSLGPDVPFTMLAASEIFSMEMSKTEALTQAFRRSIGVRIKEESEIIEGEVVEIQIDRSV TGGNKQGKLTIKTTDMETIYDMGTKMIDSMTKERVMAGDVISIDKSSGKITKLGRSYARSRDYDAMGADTKFVQC PEGELQVRKEIVHTVSLHEIDVINSRSQGFLALFSGDTGEIRSEVRDQINTKVAEWKEEGKAEIIPGVLFIDEVH MLDIECYSYINRALEAELAPIVIMASNRGQARIRGTTYTSPHGLPLDFLDRVVIVSTHMYSGDEIRQILAIRAQE EEIDLSPDALALLTKIGQESNLRYASNIITTSHLLSQKRKAKEVSVDDVQRSFRLFYDPARSVKFVNQYEQRFIG DQGTVSFTAATNGDAMELS*
Coding	>Pro_DTO377G3_2\|g4550.t1 ATGGCTGTGCCAATCTCGACTGTCGCAGAGAGCAAGGAGCTCCGGGGACTGAACCTCATCGCCGCCCATTCGCAT ATCAGAGGCCTTGGTGTCGATGCAGACACTCTTCAACCTCGGGCATCATCCCAAGGCCTTGTGGGTCAGGAAAAG GCCCGGAAGGCTGCTGCGGTGATTCTGCAGATGGTGAGGGAAGGCAAGATTGCCGGTCGCGCTGTTCTGATCGCA GGACCTCCTAGCACCGGAAAGACAGCAATTGCAATGGGCATGGCACAATCTCTCGGGCCGGACGTACCTTTCACC ATGCTTGCTGCTTCTGAAATCTTCTCAATGGAGATGTCGAAGACAGAAGCCCTGACCCAGGCATTCCGGAGGTCC ATCGGTGTGCGCATTAAGGAAGAGAGCGAAATCATTGAAGGTGAAGTTGTGGAGATTCAAATTGACCGGAGTGTT ACTGGCGGCAATAAACAAGGAAAGCTCACGATCAAGACTACGGACATGGAAACGATTTACGACATGGGAACCAAG ATGATTGATTCTATGACAAAGGAACGAGTAATGGCAGGAGATGTAATCTCGATCGACAAGTCCTCAGGCAAGATC ACCAAGCTCGGTCGCTCATACGCACGCTCTCGAGACTACGACGCCATGGGCGCCGATACCAAGTTTGTCCAATGC CCCGAAGGCGAACTCCAGGTTCGCAAGGAGATCGTCCACACCGTCAGCCTCCACGAGATCGACGTCATTAACTCG CGTTCACAAGGCTTCCTGGCTCTCTTCTCCGGCGATACGGGCGAGATTCGGAGTGAAGTTCGGGACCAGATCAAT ACCAAGGTGGCTGAATGGAAGGAAGAGGGTAAGGCAGAGATTATTCCTGGTGTTCTGTTCATTGACGAGGTTCAC ATGCTTGATATCGAGTGTTACTCCTACATCAATCGTGCCCTTGAGGCTGAGTTGGCCCCTATCGTCATCATGGCT AGCAATCGCGGCCAGGCACGCATCCGCGGAACCACCTATACCTCTCCTCACGGTCTACCCCTTGACTTCCTCGAT CGGGTTGTTATCGTCAGCACACATATGTACTCTGGTGACGAGATCCGTCAAATCCTCGCCATCCGAGCGCAGGAA GAAGAGATTGATCTTTCGCCTGATGCTCTCGCCCTTCTCACCAAGATTGGTCAGGAGTCAAATCTGCGTTATGCC AGCAACATTATTACTACTTCGCATCTCTTGAGTCAAAAACGCAAGGCGAAGGAGGTCAGTGTTGATGACGTCCAA CGCAGCTTCCGGTTGTTCTACGACCCTGCTCGGAGTGTGAAGTTCGTCAATCAATATGAGCAGCGCTTCATCGGT GACCAAGGTACCGTTAGCTTCACTGCTGCTACCAATGGCGACGCCATGGAGCTTTCTTAA
Transcript	>Pro_DTO377G3_2\|g4550.t1 ATGGCTGTGCCAATCTCGACTGTCGCAGAGAGCAAGGAGCTCCGGGGACTGAACCTCATCGCCGCCCATTCGCAT ATCAGAGGCCTTGGTGTCGATGCAGACACTCTTCAACCTCGGGCATCATCCCAAGGCCTTGTGGGTCAGGAAAAG GCCCGGAAGGCTGCTGCGGTGATTCTGCAGATGGTGAGGGAAGGCAAGATTGCCGGTCGCGCTGTTCTGATCGCA GGACCTCCTAGCACCGGAAAGACAGCAATTGCAATGGGCATGGCACAATCTCTCGGGCCGGACGTACCTTTCACC ATGCTTGCTGCTTCTGAAATCTTCTCAATGGAGATGTCGAAGACAGAAGCCCTGACCCAGGCATTCCGGAGGTCC ATCGGTGTGCGCATTAAGGAAGAGAGCGAAATCATTGAAGGTGAAGTTGTGGAGATTCAAATTGACCGGAGTGTT ACTGGCGGCAATAAACAAGGAAAGCTCACGATCAAGACTACGGACATGGAAACGATTTACGACATGGGAACCAAG ATGATTGATTCTATGACAAAGGAACGAGTAATGGCAGGAGATGTAATCTCGATCGACAAGTCCTCAGGCAAGATC ACCAAGCTCGGTCGCTCATACGCACGCTCTCGAGACTACGACGCCATGGGCGCCGATACCAAGTTTGTCCAATGC CCCGAAGGCGAACTCCAGGTTCGCAAGGAGATCGTCCACACCGTCAGCCTCCACGAGATCGACGTCATTAACTCG CGTTCACAAGGCTTCCTGGCTCTCTTCTCCGGCGATACGGGCGAGATTCGGAGTGAAGTTCGGGACCAGATCAAT ACCAAGGTGGCTGAATGGAAGGAAGAGGGTAAGGCAGAGATTATTCCTGGTGTTCTGTTCATTGACGAGGTTCAC ATGCTTGATATCGAGTGTTACTCCTACATCAATCGTGCCCTTGAGGCTGAGTTGGCCCCTATCGTCATCATGGCT AGCAATCGCGGCCAGGCACGCATCCGCGGAACCACCTATACCTCTCCTCACGGTCTACCCCTTGACTTCCTCGAT CGGGTTGTTATCGTCAGCACACATATGTACTCTGGTGACGAGATCCGTCAAATCCTCGCCATCCGAGCGCAGGAA GAAGAGATTGATCTTTCGCCTGATGCTCTCGCCCTTCTCACCAAGATTGGTCAGGAGTCAAATCTGCGTTATGCC AGCAACATTATTACTACTTCGCATCTCTTGAGTCAAAAACGCAAGGCGAAGGAGGTCAGTGTTGATGACGTCCAA CGCAGCTTCCGGTTGTTCTACGACCCTGCTCGGAGTGTGAAGTTCGTCAATCAATATGAGCAGCGCTTCATCGGT GACCAAGGTACCGTTAGCTTCACTGCTGCTACCAATGGCGACGCCATGGAGCTTTCTTAA
Gene	>Pro_DTO377G3_2\|g4550.t1 ATGGCTGTGGTGAGTTACAATTCTTCTGTAATAACCTCACGGTTGCTGACACCAAAACAGCCAATCTCGACTGTC GCAGAGAGCAAGGAGCTCCGGGGACTGAACCTCATCGCCGCCCATTCGCATATCAGAGGCCTTGGTGTCGATGCA GACACTCTTCAACCTCGGGCATCATCCCAAGGCCTTGTGGGTCAGGAAAAGGCCCGGAAGGCTGCTGCGGTGATT CTGCAGATGGTGAGGGAAGGCAAGATTGCCGGTCGCGCTGTTCTGATCGCAGGACCTCCTAGCACCGGAAAGACA GCAATTGCAATGGGCATGGCACAATCTCTCGGGCCGGACGTACCTTTCACCATGCTTGCTGCTTCTGAAATCTTC TCAATGGAGATGTCGAAGACAGAAGCCCTGACCCAGGCATTCCGGAGGTCCATCGGTGTGCGCATTAAGGAAGAG AGCGAAATCATTGAAGGTGAAGTTGTGGAGATTCAAATTGACCGGAGTGTTACTGGCGTGAGTGGATTCTCTATG CAAACGAGTTCATAACATTGGATACTGACTACCTACAGGGCAATAAACAAGGAAAGCTCACGATCAAGACTACGG ACATGGAAACGATTTACGACATGGGAACCAAGATGATTGATTCTATGACAAAGGAACGAGTAATGGCAGGAGATG TAATCTCGATCGACAAGTCCTCAGGCAAGATCACCAAGCTCGGTCGCTCATACGCACGCTCTCGAGACTACGACG CCATGGGCGCCGATACCAAGTTTGTCCAATGCCCCGAAGGCGAACTCCAGGTTCGCAAGGAGATCGTCCACACCG TCAGCCTCCACGAGATCGACGTCATTAACTCGCGTTCACAAGGCTTCCTGGCTCTCTTCTCCGGCGATACGGGCG AGATTCGGAGTGAAGTTCGGGACCAGATCAATACCAAGGTGGCTGAATGGAAGGAAGAGGGTAAGGCAGAGATTA TTCCTGGTGTTCTGTTCATTGACGAGGTTCACATGCTTGATATCGAGTGTTACTCCTACATCAATCGTGCCCTTG AGGCTGAGTTGGCCCCTATCGTCATCATGGCTAGCAATCGCGGCCAGGCACGCATCCGCGGAACCACCTATACCT CTCCTCACGGTCTACCCCTTGACTTCCTCGATCGGGTTGTTATCGTCAGCACACATATGTACTCTGGTGACGAGA TCCGTCAAATCCTCGCCATCCGAGCGCAGGAAGAAGAGATTGATCTTTCGCCTGATGCTCTCGCCCTTCTCACCA AGATTGGTCAGGAGTCAAATCTGCGTTATGCCAGCAACATTATTACTACTTCGCATCTCTTGAGTCAAAAACGCA AGGCGAAGGAGGTCAGTGTTGATGACGTCCAACGCAGCTTCCGGTTGTTCTACGACCCTGCTCGGAGTGTGAAGT TCGTCAATCAATATGAGCAGCGCTTCATCGGTGACCAAGGTACCGTTAGCTTCACTGCTGCTACCAATGGCGACG CCATGGAGCTTTCTTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences