© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4543.t1 |
| Gene name | |
| Location | scaffold_09:513484..515242 |
| Strand | + |
| Gene length (bp) | 1758 |
| Transcript length (bp) | 1554 |
| Coding sequence length (bp) | 1554 |
| Protein length (aa) | 518 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.5E-40 | 93 | 472 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.0E-13 | 139 | 267 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 9.4E-06 | 139 | 273 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 54 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 88 | 110 | 22 |
| 2 | 123 | 145 | 22 |
| 3 | 152 | 174 | 22 |
| 4 | 178 | 200 | 22 |
| 5 | 213 | 235 | 22 |
| 6 | 239 | 261 | 22 |
| 7 | 310 | 332 | 22 |
| 8 | 347 | 369 | 22 |
| 9 | 390 | 409 | 19 |
| 10 | 424 | 446 | 22 |
| 11 | 453 | 474 | 21 |
| 12 | 484 | 506 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4543.t1 MPSFELQPSSSRRDELEEVPGTKADIDLIESAGNGHAVTSVESMVARLPKAHRDYLMERHGTLELDPIPGMSPAD PYNWPEWKKMTNLVLVAFHACMGTFTAAGIIPAFLDISTELGVGMQDASYLTSLQIAILGGAPLFWKPLSNRYGR RPIFLLSLICSLVCNIGCAKSTTYASLAACRALVAFFISPASAIGSAVVMETTFKKDRGRYMGVWTLLVTLGVPV GPFIFGFVTYRVGYHWIFWILAIINGCQFILYLFLGPETRYLGGGIDSKESTMKIEYMSLRRIDPTPFSWFEFIR PLTMARHPSILIPACAYAMVFLFGNILATVEIPQLLQEKFELNAEQLGMQFLGAIIGSVIGEQMGGVLSDFWMSR RSRRINRKAEPEFRLWLSYFGFALTIIGIIVFLVCTQESPSGHWNVTPIIGTAIGAVGNQLVTTVMITYAIDCFP QEAGNIGVFITFVRQIWGFLGPFWFAPMFETVGIAPSAGIGSALVVCVSVIPTIFLQWRGKGWRSEE* |
| Coding | >Pro_DTO377G3_2|g4543.t1 ATGCCGTCCTTTGAGTTGCAACCGAGCTCGTCTCGACGAGACGAGCTCGAGGAGGTGCCAGGCACGAAAGCGGAC ATCGATCTCATCGAGAGCGCAGGAAATGGACACGCAGTCACTTCCGTCGAGTCAATGGTTGCTCGTCTGCCAAAA GCACACCGCGACTATCTGATGGAGCGACACGGGACTTTGGAACTCGATCCTATTCCCGGAATGAGTCCAGCTGAC CCTTACAACTGGCCTGAGTGGAAGAAAATGACCAACCTTGTCCTCGTGGCGTTCCACGCCTGCATGGGCACATTT ACCGCCGCCGGCATTATCCCTGCCTTTTTAGATATCTCCACAGAACTCGGCGTCGGAATGCAAGATGCTAGTTAC TTGACCTCTTTGCAAATTGCCATCCTTGGAGGTGCGCCTCTATTCTGGAAGCCGCTGTCCAACAGGTATGGGCGC CGGCCAATCTTCCTCCTCTCTCTCATCTGCAGTCTTGTGTGTAATATCGGCTGTGCCAAGAGCACCACATATGCC TCTCTGGCTGCTTGCCGGGCCCTCGTGGCATTTTTCATCTCGCCTGCCTCCGCCATTGGCAGTGCGGTCGTGATG GAGACAACATTCAAGAAAGACCGTGGCCGTTACATGGGTGTTTGGACACTGCTGGTCACCCTGGGTGTCCCCGTT GGGCCTTTCATTTTCGGCTTCGTCACCTATCGCGTTGGTTATCACTGGATCTTCTGGATCCTCGCAATTATCAAC GGCTGCCAGTTCATCTTGTATCTGTTCCTTGGCCCTGAAACTCGTTATCTGGGCGGCGGCATCGACAGCAAGGAG TCAACGATGAAGATCGAGTACATGTCACTGCGACGGATCGACCCCACACCATTCTCATGGTTCGAGTTCATCCGT CCACTGACCATGGCCCGACACCCATCAATCCTTATCCCAGCGTGCGCATACGCAATGGTTTTCCTCTTCGGCAAC ATTCTTGCAACCGTCGAGATTCCCCAACTCCTGCAAGAGAAGTTCGAACTCAACGCCGAACAGCTTGGCATGCAG TTCCTAGGCGCAATTATAGGATCCGTAATCGGCGAGCAAATGGGCGGCGTGCTGTCAGACTTCTGGATGAGCCGG CGCAGCCGACGCATCAACCGCAAGGCCGAGCCGGAATTCCGTCTGTGGCTCAGCTACTTCGGTTTCGCGCTCACC ATAATCGGCATCATCGTCTTCCTGGTCTGCACGCAGGAGTCACCCAGCGGACACTGGAACGTAACGCCCATTATT GGCACCGCTATTGGTGCTGTCGGGAACCAGCTGGTCACCACGGTAATGATCACCTATGCTATCGATTGCTTCCCA CAGGAAGCTGGTAACATTGGTGTGTTCATCACGTTTGTCCGGCAGATTTGGGGCTTCCTTGGTCCTTTCTGGTTT GCTCCCATGTTCGAGACTGTCGGTATCGCTCCCAGCGCGGGAATTGGATCTGCGCTGGTTGTCTGTGTCAGTGTC ATTCCCACCATCTTCTTGCAATGGCGGGGTAAGGGTTGGCGTAGCGAGGAGTAA |
| Transcript | >Pro_DTO377G3_2|g4543.t1 ATGCCGTCCTTTGAGTTGCAACCGAGCTCGTCTCGACGAGACGAGCTCGAGGAGGTGCCAGGCACGAAAGCGGAC ATCGATCTCATCGAGAGCGCAGGAAATGGACACGCAGTCACTTCCGTCGAGTCAATGGTTGCTCGTCTGCCAAAA GCACACCGCGACTATCTGATGGAGCGACACGGGACTTTGGAACTCGATCCTATTCCCGGAATGAGTCCAGCTGAC CCTTACAACTGGCCTGAGTGGAAGAAAATGACCAACCTTGTCCTCGTGGCGTTCCACGCCTGCATGGGCACATTT ACCGCCGCCGGCATTATCCCTGCCTTTTTAGATATCTCCACAGAACTCGGCGTCGGAATGCAAGATGCTAGTTAC TTGACCTCTTTGCAAATTGCCATCCTTGGAGGTGCGCCTCTATTCTGGAAGCCGCTGTCCAACAGGTATGGGCGC CGGCCAATCTTCCTCCTCTCTCTCATCTGCAGTCTTGTGTGTAATATCGGCTGTGCCAAGAGCACCACATATGCC TCTCTGGCTGCTTGCCGGGCCCTCGTGGCATTTTTCATCTCGCCTGCCTCCGCCATTGGCAGTGCGGTCGTGATG GAGACAACATTCAAGAAAGACCGTGGCCGTTACATGGGTGTTTGGACACTGCTGGTCACCCTGGGTGTCCCCGTT GGGCCTTTCATTTTCGGCTTCGTCACCTATCGCGTTGGTTATCACTGGATCTTCTGGATCCTCGCAATTATCAAC GGCTGCCAGTTCATCTTGTATCTGTTCCTTGGCCCTGAAACTCGTTATCTGGGCGGCGGCATCGACAGCAAGGAG TCAACGATGAAGATCGAGTACATGTCACTGCGACGGATCGACCCCACACCATTCTCATGGTTCGAGTTCATCCGT CCACTGACCATGGCCCGACACCCATCAATCCTTATCCCAGCGTGCGCATACGCAATGGTTTTCCTCTTCGGCAAC ATTCTTGCAACCGTCGAGATTCCCCAACTCCTGCAAGAGAAGTTCGAACTCAACGCCGAACAGCTTGGCATGCAG TTCCTAGGCGCAATTATAGGATCCGTAATCGGCGAGCAAATGGGCGGCGTGCTGTCAGACTTCTGGATGAGCCGG CGCAGCCGACGCATCAACCGCAAGGCCGAGCCGGAATTCCGTCTGTGGCTCAGCTACTTCGGTTTCGCGCTCACC ATAATCGGCATCATCGTCTTCCTGGTCTGCACGCAGGAGTCACCCAGCGGACACTGGAACGTAACGCCCATTATT GGCACCGCTATTGGTGCTGTCGGGAACCAGCTGGTCACCACGGTAATGATCACCTATGCTATCGATTGCTTCCCA CAGGAAGCTGGTAACATTGGTGTGTTCATCACGTTTGTCCGGCAGATTTGGGGCTTCCTTGGTCCTTTCTGGTTT GCTCCCATGTTCGAGACTGTCGGTATCGCTCCCAGCGCGGGAATTGGATCTGCGCTGGTTGTCTGTGTCAGTGTC ATTCCCACCATCTTCTTGCAATGGCGGGGTAAGGGTTGGCGTAGCGAGGAGTAA |
| Gene | >Pro_DTO377G3_2|g4543.t1 ATGCCGTCCTTTGAGTTGCAACCGAGCTCGTCTCGACGAGACGAGCTCGAGGAGGTGCCAGGCACGAAAGCGGAC ATCGATCTCATCGAGAGCGCAGGAAATGGACACGCAGTCACTTCCGTCGAGTCAATGGTTGCTCGTCTGCCAAAA GCACACCGCGACTATCTGATGGAGCGACACGGGACTTTGGAACTCGATCCTATTCCCGGAATGAGTCCAGCTGAC CCTTACAACTGGCCTGAGTGGAAGGTAAGTCAATATTCTCCCTGTTACAAAATCTTGAAACGGGACAAAAGCAAA TGATCCCGTCGGACAGAATACTGATATGTCAACGCGCAGAAAATGACCAACCTTGTCCTCGTGGCGTTCCACGCC TGCATGGGCACATTTACCGCCGCCGGCATTATCCCTGCCTTTTTAGATATCTCCACAGAACTCGGCGTCGGAATG CAAGATGCTAGTTACTTGACCTCTTTGCAAATTGCCATCCTTGGAGGTGCGCCTCTATTCTGGAAGCCGCTGTCC AACAGGTATGGGCGCCGGCCAATCTTCCTCCTCTCTCTCATCTGCAGTCTTGTGTGTAATATCGGCTGTGCCAAG AGCACCACATATGCCTCTCTGGCTGCTTGCCGGGCCCTCGTGGCATTTTTCATCTCGCCTGCCTCCGCCATTGGC AGTGCGGTCGTGATGGAGACAACATTCAAGAAAGACCGTGGCCGTTACATGGGTGTTTGGACACTGCTGGTCACC CTGGGTGTCCCCGTTGGGCCTTTCATTTTCGGCTTCGTCACCTATCGCGTTGGTTATCACTGGATCTTCTGGATC CTCGCAATTGTAAGTTCACATTCCCACGGTAGTCAATACTCTATTCATGGGCTGATACATCTAAAGATCAACGGC TGCCAGTTCATCTTGTATCTGTTCCTTGGCCCTGAAACTCGTTATCTGGGCGGCGGCATCGACAGCAAGGAGTCA ACGATGAAGATCGAGTACATGTCACTGCGACGGATCGACCCCACACCATTCTCATGGTTCGAGTTCATCCGTCCA CTGACCATGGCCCGACACCCATCAATCCTTATCCCAGCGTGCGCATACGCAATGGTTTTCCTCTTCGGCAACATT CTTGCAACCGTCGAGATTCCCCAACTCCTGCAAGAGAAGTTCGAACTCAACGCCGAACAGCTTGGCATGCAGTTC CTAGGCGCAATTATAGGATCCGTAATCGGCGAGCAAATGGGCGGCGTGCTGTCAGACTTCTGGATGAGCCGGCGC AGCCGACGCATCAACCGCAAGGCCGAGCCGGAATTCCGTCTGTGGCTCAGCTACTTCGGTTTCGCGCTCACCATA ATCGGCATCATCGTCTTCCTGGTCTGCACGCAGGAGTCACCCAGCGGACACTGGAACGTAACGCCCATTATTGGC ACCGCTATTGGTGCTGTCGGGAACCAGCTGGTCACCACGGTAATGATCACCTATGCTATCGATTGCTTCCCACAG GAAGCTGGTAACATTGGTGTGTTCATCACGTTTGTCCGGCAGATTTGGGGCTTCCTTGGTCCTTTCTGGTATGTT TTCTTTCTCTCTGCGTTTATTTTGCAAGTTCGTCGCTAACCTCAGCTCAGGTTTGCTCCCATGTTCGAGACTGTC GGTATCGCTCCCAGCGCGGGAATTGGATCTGCGCTGGTTGTCTGTGTCAGTGTCATTCCCACCATCTTCTTGCAA TGGCGGGGTAAGGGTTGGCGTAGCGAGGAGTAA |