© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4526.t1 |
| Gene name | |
| Location | scaffold_09:475336..477228 |
| Strand | + |
| Gene length (bp) | 1892 |
| Transcript length (bp) | 1833 |
| Coding sequence length (bp) | 1833 |
| Protein length (aa) | 611 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07724 | AAA_2 | AAA domain (Cdc48 subfamily) | 2.0E-35 | 184 | 453 |
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 4.7E-14 | 188 | 292 |
| PF10431 | ClpB_D2-small | C-terminal, D2-small domain, of ClpB protein | 1.7E-07 | 460 | 531 |
| PF07728 | AAA_5 | AAA domain (dynein-related subfamily) | 1.6E-05 | 187 | 263 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016887 | ATP hydrolysis activity | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0005488 | binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0043167 | ion binding | No |
| GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0016462 | pyrophosphatase activity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0016787 | hydrolase activity | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043168 | anion binding | No |
| GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0017111 | nucleoside-triphosphatase activity | No |
| Orthofinder run ID | 2 |
| Orthogroup | 6765 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4526.t1 MLWRHLQPRLAATLARRDIVRCRLPKSYSRSTRQLSSSNTFPTSSQFNRSEFTTQPFTGSYETGGPTPGPLGSTP AFGAPRITPKVLKQYLDQYVVGQDRAKKVLSVAVYNHYQRVQELVRREEEAAEALARRQRREALEIHPLDADDIA GVRKTATIPQAPKSRPDTPLDQADFADTSPLQLEKSNILLLGPSGVGKTLMAKTLARVLSVPFSISDCTVFTQAG YIGEDAEVCVHRLLAAADYNVEQAERGIIVLDEVDKIAAAKVSHGKDVGGEGVQQALLKIIEGTTVQVQAKPEKN PRATNAPNSYPSNSPLGNGSFQPNNPNPAAKGEVYNVRTDNILFVFSGAFVGLHKAIMDRISRGSIGFGQPVRTT SNTSDFPGSPNISTNQPLPILPGSEEEALYKKHLPFFSSTSPAGSGAEPTYFNALDLLTPSDLQSYGFIPELIGR IPVTAALSALSQSLLMRILTEPRNSLLAQYTTLFSLSGIELRFTTPALHKVAGNAFTMGTGARALRTEMETILSD AMFEAPGSSVKFVLVTEAVADRKEQPIYLARGQGGRFHALISAEESQWEAKTRGEKKDQAQKSKTQDDADGSNAL NSQDQNRATG* |
| Coding | >Pro_DTO377G3_2|g4526.t1 ATGCTGTGGCGGCACTTACAGCCTCGCCTCGCGGCGACCTTGGCTCGTCGTGACATTGTCCGGTGTCGGCTTCCT AAATCATACAGCCGGTCAACACGCCAACTGTCTAGCTCCAACACCTTTCCCACATCGTCTCAATTTAACCGGTCA GAATTTACAACACAACCATTTACTGGGAGCTACGAGACTGGAGGTCCTACTCCGGGGCCATTAGGATCAACCCCG GCCTTCGGCGCTCCCCGCATCACACCGAAAGTCTTAAAGCAATATCTTGATCAATATGTGGTCGGTCAGGATCGC GCAAAGAAAGTGCTCAGTGTCGCCGTGTATAATCACTACCAGCGCGTGCAAGAGTTAGTGCGCCGAGAGGAAGAA GCAGCCGAGGCTCTCGCGAGGCGTCAGCGGAGGGAAGCACTCGAGATTCATCCCTTAGACGCAGATGACATTGCA GGCGTGCGCAAGACTGCTACAATACCTCAAGCCCCCAAATCCCGCCCAGACACCCCCTTGGACCAAGCAGATTTC GCCGATACGTCGCCGCTACAGCTTGAAAAGTCCAATATTTTGTTGCTTGGTCCATCTGGTGTAGGAAAGACACTT ATGGCAAAGACTCTCGCTCGGGTGCTTTCTGTGCCTTTCAGTATCTCCGACTGCACTGTGTTCACACAAGCCGGT TACATCGGAGAGGACGCCGAAGTGTGTGTTCACCGACTTTTGGCAGCTGCGGACTACAACGTTGAGCAAGCAGAG CGTGGGATTATTGTTCTTGACGAAGTGGACAAAATTGCAGCTGCAAAGGTCAGTCATGGCAAAGATGTCGGTGGC GAAGGAGTCCAGCAGGCGCTTCTCAAGATCATTGAAGGCACAACCGTGCAGGTCCAGGCCAAGCCAGAGAAGAAT CCCCGCGCAACGAATGCCCCGAATAGCTATCCCTCCAACAGTCCTCTGGGGAATGGGTCATTTCAACCCAACAAC CCCAATCCAGCCGCCAAGGGAGAAGTGTACAATGTGCGCACGGACAACATTTTGTTCGTGTTCTCTGGCGCGTTC GTTGGACTGCACAAAGCCATCATGGACCGGATATCTCGTGGATCCATAGGGTTTGGTCAACCAGTTCGGACCACC TCAAACACTAGTGATTTCCCTGGCTCGCCAAATATCTCTACCAACCAGCCACTTCCAATCCTTCCGGGATCTGAG GAAGAAGCACTATACAAGAAGCACCTCCCCTTCTTCTCCTCTACATCACCAGCCGGTTCTGGCGCCGAGCCAACC TATTTCAACGCACTCGATCTGTTAACACCCTCAGACTTGCAAAGCTACGGCTTCATCCCAGAGCTGATCGGCAGA ATTCCCGTTACCGCCGCTCTCTCTGCACTTTCTCAATCCTTACTTATGCGCATCCTAACCGAACCCCGCAACTCC CTTCTAGCCCAATACACGACCCTATTCTCCCTCTCGGGTATCGAGCTGCGCTTCACCACACCGGCACTCCACAAA GTCGCCGGCAATGCCTTCACAATGGGCACCGGCGCACGCGCGCTGCGAACTGAGATGGAGACCATTCTCAGTGAC GCCATGTTCGAAGCGCCCGGCTCGAGTGTGAAATTTGTCCTCGTGACCGAGGCCGTGGCAGACCGTAAGGAACAG CCCATCTACCTTGCCCGTGGACAGGGTGGGCGTTTCCATGCTTTAATTTCCGCCGAGGAAAGTCAATGGGAAGCA AAGACTCGCGGAGAAAAGAAAGACCAGGCCCAAAAGAGTAAAACGCAAGATGATGCGGATGGCTCCAATGCGTTG AACTCCCAGGACCAGAATCGAGCAACTGGTTAA |
| Transcript | >Pro_DTO377G3_2|g4526.t1 ATGCTGTGGCGGCACTTACAGCCTCGCCTCGCGGCGACCTTGGCTCGTCGTGACATTGTCCGGTGTCGGCTTCCT AAATCATACAGCCGGTCAACACGCCAACTGTCTAGCTCCAACACCTTTCCCACATCGTCTCAATTTAACCGGTCA GAATTTACAACACAACCATTTACTGGGAGCTACGAGACTGGAGGTCCTACTCCGGGGCCATTAGGATCAACCCCG GCCTTCGGCGCTCCCCGCATCACACCGAAAGTCTTAAAGCAATATCTTGATCAATATGTGGTCGGTCAGGATCGC GCAAAGAAAGTGCTCAGTGTCGCCGTGTATAATCACTACCAGCGCGTGCAAGAGTTAGTGCGCCGAGAGGAAGAA GCAGCCGAGGCTCTCGCGAGGCGTCAGCGGAGGGAAGCACTCGAGATTCATCCCTTAGACGCAGATGACATTGCA GGCGTGCGCAAGACTGCTACAATACCTCAAGCCCCCAAATCCCGCCCAGACACCCCCTTGGACCAAGCAGATTTC GCCGATACGTCGCCGCTACAGCTTGAAAAGTCCAATATTTTGTTGCTTGGTCCATCTGGTGTAGGAAAGACACTT ATGGCAAAGACTCTCGCTCGGGTGCTTTCTGTGCCTTTCAGTATCTCCGACTGCACTGTGTTCACACAAGCCGGT TACATCGGAGAGGACGCCGAAGTGTGTGTTCACCGACTTTTGGCAGCTGCGGACTACAACGTTGAGCAAGCAGAG CGTGGGATTATTGTTCTTGACGAAGTGGACAAAATTGCAGCTGCAAAGGTCAGTCATGGCAAAGATGTCGGTGGC GAAGGAGTCCAGCAGGCGCTTCTCAAGATCATTGAAGGCACAACCGTGCAGGTCCAGGCCAAGCCAGAGAAGAAT CCCCGCGCAACGAATGCCCCGAATAGCTATCCCTCCAACAGTCCTCTGGGGAATGGGTCATTTCAACCCAACAAC CCCAATCCAGCCGCCAAGGGAGAAGTGTACAATGTGCGCACGGACAACATTTTGTTCGTGTTCTCTGGCGCGTTC GTTGGACTGCACAAAGCCATCATGGACCGGATATCTCGTGGATCCATAGGGTTTGGTCAACCAGTTCGGACCACC TCAAACACTAGTGATTTCCCTGGCTCGCCAAATATCTCTACCAACCAGCCACTTCCAATCCTTCCGGGATCTGAG GAAGAAGCACTATACAAGAAGCACCTCCCCTTCTTCTCCTCTACATCACCAGCCGGTTCTGGCGCCGAGCCAACC TATTTCAACGCACTCGATCTGTTAACACCCTCAGACTTGCAAAGCTACGGCTTCATCCCAGAGCTGATCGGCAGA ATTCCCGTTACCGCCGCTCTCTCTGCACTTTCTCAATCCTTACTTATGCGCATCCTAACCGAACCCCGCAACTCC CTTCTAGCCCAATACACGACCCTATTCTCCCTCTCGGGTATCGAGCTGCGCTTCACCACACCGGCACTCCACAAA GTCGCCGGCAATGCCTTCACAATGGGCACCGGCGCACGCGCGCTGCGAACTGAGATGGAGACCATTCTCAGTGAC GCCATGTTCGAAGCGCCCGGCTCGAGTGTGAAATTTGTCCTCGTGACCGAGGCCGTGGCAGACCGTAAGGAACAG CCCATCTACCTTGCCCGTGGACAGGGTGGGCGTTTCCATGCTTTAATTTCCGCCGAGGAAAGTCAATGGGAAGCA AAGACTCGCGGAGAAAAGAAAGACCAGGCCCAAAAGAGTAAAACGCAAGATGATGCGGATGGCTCCAATGCGTTG AACTCCCAGGACCAGAATCGAGCAACTGGTTAA |
| Gene | >Pro_DTO377G3_2|g4526.t1 ATGCTGTGGCGGCACTTACAGCCTCGCCTCGCGGCGACCTTGGCTCGTCGTGACATTGTCCGGTGTCGGCTTCCT AAATCATACAGCCGGTCAACACGCCAACTGTCTAGCTCCAACACCTTTCCCACATCGTCTCAATTTAACCGGTCA GAATTTACAACACAACCATTTACTGGGAGCTACGAGACTGGAGGTCCTACTCCGGGGCCATTAGGATCAACCCCG GCCTTCGGCGCTCCCCGCATCACACCGAAAGTCTTAAAGCAATATCTTGATCAATATGTGGTCGGTCAGGATCGC GCAAAGAAAGTGCTCAGTGTCGCCGTGTATAATCACTACCAGCGCGTGCAAGAGTTAGTGCGCCGAGAGGAAGAA GCAGCCGAGGCTCTCGCGAGGCGTCAGCGGAGGGAAGCACTCGAGATTCATCCCTTAGACGGTATATCACCTATT GAGTTTTGCGCTTTCGCTCATTTTCTGATTGATTTTTCGATACAGCAGATGACATTGCAGGCGTGCGCAAGACTG CTACAATACCTCAAGCCCCCAAATCCCGCCCAGACACCCCCTTGGACCAAGCAGATTTCGCCGATACGTCGCCGC TACAGCTTGAAAAGTCCAATATTTTGTTGCTTGGTCCATCTGGTGTAGGAAAGACACTTATGGCAAAGACTCTCG CTCGGGTGCTTTCTGTGCCTTTCAGTATCTCCGACTGCACTGTGTTCACACAAGCCGGTTACATCGGAGAGGACG CCGAAGTGTGTGTTCACCGACTTTTGGCAGCTGCGGACTACAACGTTGAGCAAGCAGAGCGTGGGATTATTGTTC TTGACGAAGTGGACAAAATTGCAGCTGCAAAGGTCAGTCATGGCAAAGATGTCGGTGGCGAAGGAGTCCAGCAGG CGCTTCTCAAGATCATTGAAGGCACAACCGTGCAGGTCCAGGCCAAGCCAGAGAAGAATCCCCGCGCAACGAATG CCCCGAATAGCTATCCCTCCAACAGTCCTCTGGGGAATGGGTCATTTCAACCCAACAACCCCAATCCAGCCGCCA AGGGAGAAGTGTACAATGTGCGCACGGACAACATTTTGTTCGTGTTCTCTGGCGCGTTCGTTGGACTGCACAAAG CCATCATGGACCGGATATCTCGTGGATCCATAGGGTTTGGTCAACCAGTTCGGACCACCTCAAACACTAGTGATT TCCCTGGCTCGCCAAATATCTCTACCAACCAGCCACTTCCAATCCTTCCGGGATCTGAGGAAGAAGCACTATACA AGAAGCACCTCCCCTTCTTCTCCTCTACATCACCAGCCGGTTCTGGCGCCGAGCCAACCTATTTCAACGCACTCG ATCTGTTAACACCCTCAGACTTGCAAAGCTACGGCTTCATCCCAGAGCTGATCGGCAGAATTCCCGTTACCGCCG CTCTCTCTGCACTTTCTCAATCCTTACTTATGCGCATCCTAACCGAACCCCGCAACTCCCTTCTAGCCCAATACA CGACCCTATTCTCCCTCTCGGGTATCGAGCTGCGCTTCACCACACCGGCACTCCACAAAGTCGCCGGCAATGCCT TCACAATGGGCACCGGCGCACGCGCGCTGCGAACTGAGATGGAGACCATTCTCAGTGACGCCATGTTCGAAGCGC CCGGCTCGAGTGTGAAATTTGTCCTCGTGACCGAGGCCGTGGCAGACCGTAAGGAACAGCCCATCTACCTTGCCC GTGGACAGGGTGGGCGTTTCCATGCTTTAATTTCCGCCGAGGAAAGTCAATGGGAAGCAAAGACTCGCGGAGAAA AGAAAGACCAGGCCCAAAAGAGTAAAACGCAAGATGATGCGGATGGCTCCAATGCGTTGAACTCCCAGGACCAGA ATCGAGCAACTGGTTAA |