© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4522.t1 |
| Gene name | |
| Location | scaffold_09:463499..466174 |
| Strand | - |
| Gene length (bp) | 2675 |
| Transcript length (bp) | 2499 |
| Coding sequence length (bp) | 2499 |
| Protein length (aa) | 833 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02714 | RSN1_7TM | Calcium-dependent channel, 7TM region, putative phosphate | 1.5E-79 | 429 | 706 |
| PF14703 | PHM7_cyt | Cytosolic domain of 10TM putative phosphate transporter | 1.3E-42 | 220 | 417 |
| PF13967 | RSN1_TM | Late exocytosis, associated with Golgi transport | 8.1E-40 | 39 | 200 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| 2 | 120 | 139 | 19 |
| 3 | 176 | 198 | 22 |
| 4 | 429 | 451 | 22 |
| 5 | 480 | 502 | 22 |
| 6 | 523 | 545 | 22 |
| 7 | 560 | 582 | 22 |
| 8 | 587 | 608 | 21 |
| 9 | 623 | 645 | 22 |
| 10 | 650 | 672 | 22 |
| 11 | 687 | 709 | 22 |
| 12 | 716 | 733 | 17 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 25.21 | 14.93 | 35.50 |
| 5d_25C | Five days - 25 degrees Celsius | 23.15 | 13.57 | 32.73 |
| 7d_25C | Seven days - 25 degrees Celsius | 22.35 | 12.97 | 31.73 |
| 10d_25C | Ten days - 25 degrees Celsius | 17.78 | 10.02 | 25.54 |
| 7d_15C | Seven days - 15 degrees Celsius | 26.93 | 15.93 | 37.93 |
| 7d_30C | Seven days - 30 degrees Celsius | 19.53 | 11.17 | 27.88 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.781561 | no |
| 3d_25C | 7d_25C | 0.686838 | no |
| 3d_25C | 7d_15C | 0.838857 | no |
| 3d_25C | 7d_30C | 0.313002 | no |
| 3d_25C | 10d_25C | 0.150086 | no |
| 5d_25C | 7d_25C | 0.922933 | no |
| 5d_25C | 7d_15C | 0.584709 | no |
| 5d_25C | 7d_30C | 0.539472 | no |
| 5d_25C | 10d_25C | 0.304008 | no |
| 7d_25C | 7d_15C | 0.483122 | no |
| 7d_25C | 7d_30C | 0.648354 | no |
| 7d_25C | 10d_25C | 0.391534 | no |
| 7d_15C | 7d_30C | 0.180490 | no |
| 7d_15C | 10d_25C | 0.075022 | no |
| 7d_30C | 10d_25C | 0.780081 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4522.t1 MSLTASAACAALTLLADKPDDGSKRPWRPNDPVKEQRDLYTQFVISSALGLIAFLTFCILRPKWTELYAARRRQR NAASQLPELPDTLFGWIPVLHRITEEEVLQSAGLDAYVFMSFFKFAIRFLLAVFIFAVAIILPMHYKYTGQYGVP GWDNVPGNDTMSSLGGIEKEKPVTDPGYLWIYVLFAYVFSGLAIYMLLDETKVIIRTRQSYLGNQTSTTDRTIRL SGIPNDLGTEDKIKEFVEGLRVGKVESITVCRKWRELDELIDERMKVIRELERAWTKHMGYKRPKNDGNTLPLTE QQPRDADDERSGLLSGHENEHVSEYSNERPKTRIWYGPLKLRFRMIDAIDYYEEKLRKIDEHIKNAREKEYPTTE IAFVTMESIAASQMLVQAILDPHPMQMFARLAPAPADVIWKNTYLSRTRRMVQSWSITMVIGFLTVFWSVLLVPI ASLLELKTLETIVPRLAEFLQEHPIVKSLVQTGLPTLAFSLLTVAVPYLYEWLSNNQGMVSRGDVQLSVISKNFF FSFFNLFLLFTVFGTASGFYGFWESLRDAFKDSTTIALALANSLEGLAPFYINLLILQGLGLFPFRLLEFGSVAL YPFQFLSARTPREYAELSTPPKFSYGFSIPQTILILVICVVYSVFPSSWLICLFGLIYFTVGKFIYKYQLLYAMD HQQHSTGRAWPMICNRVFVGLLVHQLAMIGVLALRRAITRSLLLVPLLGFTVWFSYWFGRTYEPLMKFIALKSIN RDQPGGGDISPSPSSTFSPPSGLDRDSFPIRIGGHDLDLRLRKYVNPSLIIPLDAAWLPGPNPARGNGNGASALD VHPTQSV* |
| Coding | >Pro_DTO377G3_2|g4522.t1 ATGTCTCTTACGGCATCAGCAGCCTGCGCTGCGTTGACATTGCTTGCCGACAAGCCTGATGACGGAAGCAAAAGG CCATGGCGTCCCAACGACCCTGTGAAAGAACAGCGCGATCTATACACGCAGTTTGTAATTAGCTCTGCGCTTGGT CTCATCGCCTTTTTGACGTTCTGTATTTTGCGACCAAAATGGACCGAGTTGTATGCTGCCCGACGACGACAAAGA AATGCTGCTTCGCAGTTACCTGAGCTTCCAGATACCCTTTTTGGTTGGATTCCCGTTCTTCATCGGATTACAGAA GAGGAGGTGCTGCAGTCTGCGGGCCTAGATGCATATGTGTTCATGTCTTTCTTCAAGTTTGCGATCCGATTTCTT CTGGCTGTCTTTATCTTCGCTGTTGCCATCATCCTCCCTATGCACTACAAATACACCGGCCAATATGGAGTTCCT GGCTGGGATAACGTCCCCGGCAATGATACCATGAGTTCACTTGGTGGAATCGAAAAAGAAAAGCCAGTTACAGAC CCTGGATATCTTTGGATATACGTACTGTTCGCATATGTCTTCAGTGGCTTGGCCATCTACATGCTTCTTGACGAG ACAAAAGTAATTATTCGCACTCGGCAATCCTATCTCGGGAATCAGACAAGCACCACTGATCGCACCATTCGTCTG TCCGGAATCCCGAATGACTTGGGAACCGAAGATAAGATCAAAGAATTCGTGGAAGGCCTGCGAGTCGGCAAAGTG GAGAGTATCACGGTGTGCCGAAAGTGGCGGGAGCTGGACGAATTGATCGACGAGAGAATGAAAGTCATTCGTGAA CTTGAGAGAGCATGGACAAAACATATGGGATACAAGCGACCAAAGAACGATGGAAATACATTGCCGCTGACGGAG CAACAACCCCGTGATGCAGACGATGAACGGTCCGGACTCCTGTCCGGACACGAGAACGAGCATGTCTCGGAGTAT TCGAATGAAAGACCCAAGACTCGTATCTGGTATGGTCCATTGAAGCTTCGTTTCCGGATGATCGATGCAATCGAT TACTATGAGGAGAAGCTACGGAAGATTGATGAACATATCAAAAACGCCCGAGAGAAAGAATATCCTACTACCGAG ATTGCTTTCGTCACGATGGAGTCAATCGCCGCGTCTCAAATGCTTGTTCAAGCGATCCTTGATCCACACCCAATG CAGATGTTCGCTCGACTTGCACCGGCGCCGGCAGATGTTATTTGGAAAAACACTTACTTGTCGCGTACTCGACGA ATGGTTCAGTCATGGTCCATCACCATGGTCATTGGATTCCTCACCGTGTTTTGGTCTGTGCTCTTGGTTCCTATT GCCTCATTGCTGGAGCTGAAGACACTTGAGACGATTGTCCCTCGGCTGGCAGAATTCCTCCAGGAACATCCGATC GTCAAGTCGTTGGTTCAGACCGGATTGCCTACCCTCGCATTCTCGCTGTTGACAGTAGCTGTGCCTTATCTCTAT GAGTGGCTCTCGAACAACCAAGGAATGGTGTCACGTGGGGATGTTCAGCTCTCCGTGATCTCCAAGAATTTCTTC TTCTCGTTCTTCAATTTGTTCCTTCTGTTCACTGTGTTTGGAACAGCGAGTGGCTTCTATGGGTTCTGGGAAAGT CTTCGGGATGCATTTAAAGATTCTACAACAATTGCCCTCGCATTGGCCAATTCCCTCGAAGGCCTGGCTCCATTC TACATCAACCTGTTGATTCTGCAGGGATTGGGCCTTTTCCCCTTCCGACTCCTCGAATTCGGAAGTGTCGCACTC TACCCCTTCCAATTCCTATCAGCACGCACGCCACGGGAATATGCGGAGCTGTCAACTCCTCCCAAGTTCAGCTAC GGTTTCTCCATCCCGCAAACCATCTTGATATTAGTCATCTGTGTGGTTTACAGTGTGTTCCCGAGCTCGTGGCTG ATCTGCCTATTCGGGCTGATCTACTTCACAGTCGGCAAATTTATCTACAAATACCAACTGCTATATGCCATGGAT CACCAGCAACATTCCACTGGCCGCGCGTGGCCGATGATTTGCAATCGCGTGTTTGTGGGGCTGTTGGTTCATCAG CTGGCCATGATTGGTGTTCTGGCTCTGCGCCGAGCTATCACGCGGTCGCTACTCCTGGTGCCACTTCTAGGCTTC ACCGTTTGGTTTTCATACTGGTTTGGGCGTACATACGAGCCCCTGATGAAGTTCATTGCCCTCAAGAGTATCAAT CGGGACCAGCCGGGTGGTGGCGACATCTCCCCCTCGCCTTCATCGACCTTCTCACCGCCATCAGGCCTAGATCGC GATAGCTTTCCGATACGCATTGGCGGACATGACCTCGATTTGCGGCTGAGGAAGTACGTCAACCCGAGCTTGATT ATCCCGTTGGATGCTGCCTGGCTCCCTGGTCCCAACCCCGCTCGAGGCAACGGAAACGGCGCGTCCGCGCTGGAC GTCCATCCGACACAGAGCGTTTGA |
| Transcript | >Pro_DTO377G3_2|g4522.t1 ATGTCTCTTACGGCATCAGCAGCCTGCGCTGCGTTGACATTGCTTGCCGACAAGCCTGATGACGGAAGCAAAAGG CCATGGCGTCCCAACGACCCTGTGAAAGAACAGCGCGATCTATACACGCAGTTTGTAATTAGCTCTGCGCTTGGT CTCATCGCCTTTTTGACGTTCTGTATTTTGCGACCAAAATGGACCGAGTTGTATGCTGCCCGACGACGACAAAGA AATGCTGCTTCGCAGTTACCTGAGCTTCCAGATACCCTTTTTGGTTGGATTCCCGTTCTTCATCGGATTACAGAA GAGGAGGTGCTGCAGTCTGCGGGCCTAGATGCATATGTGTTCATGTCTTTCTTCAAGTTTGCGATCCGATTTCTT CTGGCTGTCTTTATCTTCGCTGTTGCCATCATCCTCCCTATGCACTACAAATACACCGGCCAATATGGAGTTCCT GGCTGGGATAACGTCCCCGGCAATGATACCATGAGTTCACTTGGTGGAATCGAAAAAGAAAAGCCAGTTACAGAC CCTGGATATCTTTGGATATACGTACTGTTCGCATATGTCTTCAGTGGCTTGGCCATCTACATGCTTCTTGACGAG ACAAAAGTAATTATTCGCACTCGGCAATCCTATCTCGGGAATCAGACAAGCACCACTGATCGCACCATTCGTCTG TCCGGAATCCCGAATGACTTGGGAACCGAAGATAAGATCAAAGAATTCGTGGAAGGCCTGCGAGTCGGCAAAGTG GAGAGTATCACGGTGTGCCGAAAGTGGCGGGAGCTGGACGAATTGATCGACGAGAGAATGAAAGTCATTCGTGAA CTTGAGAGAGCATGGACAAAACATATGGGATACAAGCGACCAAAGAACGATGGAAATACATTGCCGCTGACGGAG CAACAACCCCGTGATGCAGACGATGAACGGTCCGGACTCCTGTCCGGACACGAGAACGAGCATGTCTCGGAGTAT TCGAATGAAAGACCCAAGACTCGTATCTGGTATGGTCCATTGAAGCTTCGTTTCCGGATGATCGATGCAATCGAT TACTATGAGGAGAAGCTACGGAAGATTGATGAACATATCAAAAACGCCCGAGAGAAAGAATATCCTACTACCGAG ATTGCTTTCGTCACGATGGAGTCAATCGCCGCGTCTCAAATGCTTGTTCAAGCGATCCTTGATCCACACCCAATG CAGATGTTCGCTCGACTTGCACCGGCGCCGGCAGATGTTATTTGGAAAAACACTTACTTGTCGCGTACTCGACGA ATGGTTCAGTCATGGTCCATCACCATGGTCATTGGATTCCTCACCGTGTTTTGGTCTGTGCTCTTGGTTCCTATT GCCTCATTGCTGGAGCTGAAGACACTTGAGACGATTGTCCCTCGGCTGGCAGAATTCCTCCAGGAACATCCGATC GTCAAGTCGTTGGTTCAGACCGGATTGCCTACCCTCGCATTCTCGCTGTTGACAGTAGCTGTGCCTTATCTCTAT GAGTGGCTCTCGAACAACCAAGGAATGGTGTCACGTGGGGATGTTCAGCTCTCCGTGATCTCCAAGAATTTCTTC TTCTCGTTCTTCAATTTGTTCCTTCTGTTCACTGTGTTTGGAACAGCGAGTGGCTTCTATGGGTTCTGGGAAAGT CTTCGGGATGCATTTAAAGATTCTACAACAATTGCCCTCGCATTGGCCAATTCCCTCGAAGGCCTGGCTCCATTC TACATCAACCTGTTGATTCTGCAGGGATTGGGCCTTTTCCCCTTCCGACTCCTCGAATTCGGAAGTGTCGCACTC TACCCCTTCCAATTCCTATCAGCACGCACGCCACGGGAATATGCGGAGCTGTCAACTCCTCCCAAGTTCAGCTAC GGTTTCTCCATCCCGCAAACCATCTTGATATTAGTCATCTGTGTGGTTTACAGTGTGTTCCCGAGCTCGTGGCTG ATCTGCCTATTCGGGCTGATCTACTTCACAGTCGGCAAATTTATCTACAAATACCAACTGCTATATGCCATGGAT CACCAGCAACATTCCACTGGCCGCGCGTGGCCGATGATTTGCAATCGCGTGTTTGTGGGGCTGTTGGTTCATCAG CTGGCCATGATTGGTGTTCTGGCTCTGCGCCGAGCTATCACGCGGTCGCTACTCCTGGTGCCACTTCTAGGCTTC ACCGTTTGGTTTTCATACTGGTTTGGGCGTACATACGAGCCCCTGATGAAGTTCATTGCCCTCAAGAGTATCAAT CGGGACCAGCCGGGTGGTGGCGACATCTCCCCCTCGCCTTCATCGACCTTCTCACCGCCATCAGGCCTAGATCGC GATAGCTTTCCGATACGCATTGGCGGACATGACCTCGATTTGCGGCTGAGGAAGTACGTCAACCCGAGCTTGATT ATCCCGTTGGATGCTGCCTGGCTCCCTGGTCCCAACCCCGCTCGAGGCAACGGAAACGGCGCGTCCGCGCTGGAC GTCCATCCGACACAGAGCGTTTGA |
| Gene | >Pro_DTO377G3_2|g4522.t1 ATGTCTCTTACGGCATCAGCAGCCTGCGCTGCGTTGACATTGCTTGCCGACAAGCCTGATGACGGAAGCAAAAGG CCATGGCGTCCCAACGACCCTGTGAAAGAACAGCGCGATCTATACACGCAGTTTGTAATTAGCTCTGCGCTTGGT CTCATCGCCTTTTTGACGTTCTGTGTAAGTATCTCTGTTACTGTGAGGTGTCGTCAATCGCTGACTGCCTTGCTT ATAGATTTTGCGACCAAAATGGACCGAGTTGTATGCTGCCCGACGACGACAAAGAAATGCTGCTTCGCAGTTACC TGAGCTTCCAGATACCCTTTTTGGTTGGATTCCCGTTCTTCATCGGATTACAGAAGAGGAGGTGCTGCAGTCTGC GGGCCTAGATGCATATGTGGTATGTTCGAATGCTATGGCTTCTCCAGACAATGCATGGACACTTGCTGACTTGAG TCTTTGGGCAGTTCATGTCTTTCTTCAAGTTTGCGATCCGATTTCTTCTGGCTGTCTTTATCTTCGCTGTTGCCA TCATCCTCCCTATGCACTACAAATACACCGGCCAATATGGAGTTCCTGGCTGGGATAACGTCCCCGGCAATGATA CCATGAGTTCACTTGGTGGAATCGAAAAAGAAAAGCCAGTTACAGACCCTGGATATCTTTGGATATACGTACTGT TCGCATATGTCTTCAGTGGCTTGGCCATCTACATGCTTCTTGACGAGACAAAAGTAATTATTCGCACTCGGCAAT CCTATCTCGGGAATCAGACAAGCACCACTGATCGCACCATTCGTCTGTCCGGAATCCCGAATGACTTGGGAACCG AAGATAAGATCAAAGAATTCGTGGAAGGCCTGCGAGTCGGCAAAGTGGAGAGTATCACGGTGTGCCGAAAGTGGC GGGAGCTGGACGAATTGATCGACGAGAGAATGAAAGTCATTCGTGAACTTGAGAGAGCATGGACAAAACATATGG GATACAAGCGACCAAAGAACGATGGAAATACATTGCCGCTGACGGAGCAACAACCCCGTGATGCAGACGATGAAC GGTCCGGACTCCTGTCCGGACACGAGAACGAGCATGTCTCGGAGTATTCGAATGAAAGACCCAAGACTCGTATCT GGTATGGTCCATTGAAGCTTCGTTTCCGGATGATCGATGCAATCGATTACTATGAGGAGAAGCTACGGAAGATTG ATGAACATATCAAAAACGCCCGAGAGAAAGAATATCCTACTACCGAGATTGCTTTCGTCACGATGGAGTCAATCG CCGCGTCTCAAATGCTTGTTCAAGCGATCCTTGATCCACACCCAATGCAGATGTTCGCTCGACTTGCACCGGCGC CGGCAGATGTTATTTGGAAAAACACTTACTTGTCGCGTACTCGACGAATGGTTCAGTCATGGTCCATCACCATGG TCATTGGATTCCTCACCGTGTTTTGGTCTGTGCTCTTGGTTCCTATTGCCTCATTGCTGGAGCTGAAGACACTTG AGACGATTGTCCCTCGGCTGGCAGAATTCCTCCAGGAACATCCGATCGTCAAGTCGTTGGTTCAGACCGGATTGC CTACCCTCGCATTCTCGCTGTTGACAGTAGCTGTGCCTTATCTCTATGAGTGTAAGTCTTTGAACATACCCGTTC TGTAGTTCAAATCGCTAATTATCTTTGCAGGGCTCTCGAACAACCAAGGAATGGTGTCACGTGGGGATGTTCAGC TCTCCGTGATCTCCAAGAATTTCTTCTTCTCGTTCTTCAATTTGTTCCTTCTGTTCACTGTGTTTGGAACAGCGA GTGGCTTCTATGGGTTCTGGGAAAGTCTTCGGGATGCATTTAAAGATTCTACAACAATTGCCCTCGCATTGGCCA ATTCCCTCGAAGGCCTGGCTCCATTCTACATCAACCTGTTGATTCTGCAGGGATTGGGCCTTTTCCCCTTCCGAC TCCTCGAATTCGGAAGTGTCGCACTCTACCCCTTCCAATTCCTATCAGCACGCACGCCACGGGAATATGCGGAGC TGTCAACTCCTCCCAAGTTCAGCTACGGTTTCTCCATCCCGCAAACCATCTTGATATTAGTCATCTGTGTGGTTT ACAGTGTGTTCCCGAGCTCGTGGCTGATCTGCCTATTCGGGCTGATCTACTTCACAGTCGGCAAATTTATCTACA AATACCAACTGCTATATGCCATGGATCACCAGCAACATTCCACTGGCCGCGCGTGGCCGATGATTTGCAATCGCG TGTTTGTGGGGCTGTTGGTTCATCAGCTGGCCATGATTGGTGTTCTGGCTCTGCGCCGAGCTATCACGCGGTCGC TACTCCTGGTGCCACTTCTAGGCTTCACCGTTTGGTTTTCATACTGGTTTGGGCGTACATACGAGCCCCTGATGA AGTTCATTGCCCTCAAGAGTATCAATCGGGACCAGCCGGGTGGTGGCGACATCTCCCCCTCGCCTTCATCGACCT TCTCACCGCCATCAGGCCTAGATCGCGATAGCTTTCCGATACGCATTGGCGGACATGACCTCGATTTGCGGCTGA GGAAGTACGTCAACCCGAGCTTGATTATCCCGTTGGATGCTGCCTGGCTCCCTGGTCCCAACCCCGCTCGAGGCA ACGGAAACGGCGCGTCCGCGCTGGACGTCCATCCGACACAGAGCGTTTGA |