© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g452.t1 |
| Gene name | |
| Location | scaffold_01:1145898..1146994 |
| Strand | + |
| Gene length (bp) | 1096 |
| Transcript length (bp) | 1035 |
| Coding sequence length (bp) | 1035 |
| Protein length (aa) | 345 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08552 | Kei1 | Inositolphosphorylceramide synthase subunit Kei1 | 8.0E-66 | 15 | 209 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0070917 | inositol phosphoceramide synthase regulator activity | Yes |
| GO:0006673 | inositol phosphoceramide metabolic process | Yes |
| GO:0006643 | membrane lipid metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006665 | sphingolipid metabolic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0098772 | molecular function regulator activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0030234 | enzyme regulator activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 27 | 49 | 22 |
| 2 | 59 | 78 | 19 |
| 3 | 91 | 113 | 22 |
| 4 | 182 | 204 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g452.t1 MGFASRFLRIPRPESFFYLMSLETGASLITLSLLLNKISGLYGLLALLTGYHLSPVQLSMYLWSLIALGLASLLF PHIRKQSPLQCLALTYLYVFDSLINAAYTAAFGVTWFLVVSQHYDSGNAAGPGGETIAETAGFTSPKYDAAYVEI QNTKEGNNFIAHPPRSAEDFSNVVLQPESLPSIIFICLLWVIRVYFVLVMLAFARQALRLWVAVPRHTQLPTHSR NVSVASVADIDREPFSPYSPDGQGWEGKLGRVMISIGHSYWLGEEEDGNWLSGINHKFRNRSGNTELPGALERER RRRSGTGPPTPSPSIVRSTVLQQPIAETTPAGMNVKMQDWTAPR* |
| Coding | >Pro_DTO377G3_2|g452.t1 ATGGGGTTCGCTTCCCGTTTTCTCCGCATTCCGCGGCCAGAGTCCTTTTTCTATCTGATGAGCTTAGAGACTGGT GCTTCCTTGATCACACTTTCACTGCTCTTGAATAAAATCAGTGGCCTATATGGCCTGCTAGCTCTTTTGACCGGC TACCACCTGTCCCCCGTACAACTCTCAATGTACCTTTGGTCCCTCATTGCCCTTGGACTCGCCTCACTTCTGTTC CCCCACATTCGCAAACAGTCGCCTCTGCAATGTCTCGCCCTCACCTACCTTTATGTATTCGACAGCCTAATTAAC GCTGCATACACTGCCGCTTTCGGTGTGACTTGGTTCTTGGTGGTATCGCAACATTACGATAGTGGCAACGCCGCG GGTCCAGGGGGCGAGACGATCGCGGAAACCGCTGGCTTCACCAGCCCCAAGTACGATGCAGCATATGTTGAGATC CAGAACACAAAGGAAGGAAATAACTTCATCGCTCATCCCCCGCGGTCCGCCGAAGATTTCAGCAATGTCGTCCTT CAACCCGAGAGTCTCCCCAGCATCATCTTCATCTGCCTTCTGTGGGTGATTAGAGTCTACTTTGTTCTGGTCATG CTCGCTTTCGCACGCCAGGCCCTCCGTCTCTGGGTTGCGGTCCCGCGACACACCCAACTCCCGACCCACAGCCGC AACGTTTCAGTCGCCAGCGTTGCCGATATCGATCGGGAGCCTTTCTCCCCCTACAGTCCCGACGGCCAGGGCTGG GAAGGTAAGTTGGGTCGTGTAATGATCAGTATCGGCCACAGCTATTGGCTGGGTGAAGAGGAAGACGGTAACTGG CTCAGCGGCATCAACCACAAGTTCCGCAACCGTTCGGGCAATACGGAGCTGCCCGGCGCGCTAGAAAGAGAAAGA AGACGACGTTCCGGAACGGGTCCACCAACACCGTCGCCATCTATTGTTCGATCTACTGTCCTTCAACAGCCAATT GCTGAGACTACACCTGCTGGCATGAATGTGAAGATGCAAGATTGGACCGCACCCCGATAA |
| Transcript | >Pro_DTO377G3_2|g452.t1 ATGGGGTTCGCTTCCCGTTTTCTCCGCATTCCGCGGCCAGAGTCCTTTTTCTATCTGATGAGCTTAGAGACTGGT GCTTCCTTGATCACACTTTCACTGCTCTTGAATAAAATCAGTGGCCTATATGGCCTGCTAGCTCTTTTGACCGGC TACCACCTGTCCCCCGTACAACTCTCAATGTACCTTTGGTCCCTCATTGCCCTTGGACTCGCCTCACTTCTGTTC CCCCACATTCGCAAACAGTCGCCTCTGCAATGTCTCGCCCTCACCTACCTTTATGTATTCGACAGCCTAATTAAC GCTGCATACACTGCCGCTTTCGGTGTGACTTGGTTCTTGGTGGTATCGCAACATTACGATAGTGGCAACGCCGCG GGTCCAGGGGGCGAGACGATCGCGGAAACCGCTGGCTTCACCAGCCCCAAGTACGATGCAGCATATGTTGAGATC CAGAACACAAAGGAAGGAAATAACTTCATCGCTCATCCCCCGCGGTCCGCCGAAGATTTCAGCAATGTCGTCCTT CAACCCGAGAGTCTCCCCAGCATCATCTTCATCTGCCTTCTGTGGGTGATTAGAGTCTACTTTGTTCTGGTCATG CTCGCTTTCGCACGCCAGGCCCTCCGTCTCTGGGTTGCGGTCCCGCGACACACCCAACTCCCGACCCACAGCCGC AACGTTTCAGTCGCCAGCGTTGCCGATATCGATCGGGAGCCTTTCTCCCCCTACAGTCCCGACGGCCAGGGCTGG GAAGGTAAGTTGGGTCGTGTAATGATCAGTATCGGCCACAGCTATTGGCTGGGTGAAGAGGAAGACGGTAACTGG CTCAGCGGCATCAACCACAAGTTCCGCAACCGTTCGGGCAATACGGAGCTGCCCGGCGCGCTAGAAAGAGAAAGA AGACGACGTTCCGGAACGGGTCCACCAACACCGTCGCCATCTATTGTTCGATCTACTGTCCTTCAACAGCCAATT GCTGAGACTACACCTGCTGGCATGAATGTGAAGATGCAAGATTGGACCGCACCCCGATAA |
| Gene | >Pro_DTO377G3_2|g452.t1 ATGGGGTTCGCTTCCCGTTTTCTCCGCATTCCGCGGCCAGAGGTGAGTTGAGATCGAATCTTATCATTGCCCCCC GGAGCTAACTTATTTCGTCATCTCAAAGTCCTTTTTCTATCTGATGAGCTTAGAGACTGGTGCTTCCTTGATCAC ACTTTCACTGCTCTTGAATAAAATCAGTGGCCTATATGGCCTGCTAGCTCTTTTGACCGGCTACCACCTGTCCCC CGTACAACTCTCAATGTACCTTTGGTCCCTCATTGCCCTTGGACTCGCCTCACTTCTGTTCCCCCACATTCGCAA ACAGTCGCCTCTGCAATGTCTCGCCCTCACCTACCTTTATGTATTCGACAGCCTAATTAACGCTGCATACACTGC CGCTTTCGGTGTGACTTGGTTCTTGGTGGTATCGCAACATTACGATAGTGGCAACGCCGCGGGTCCAGGGGGCGA GACGATCGCGGAAACCGCTGGCTTCACCAGCCCCAAGTACGATGCAGCATATGTTGAGATCCAGAACACAAAGGA AGGAAATAACTTCATCGCTCATCCCCCGCGGTCCGCCGAAGATTTCAGCAATGTCGTCCTTCAACCCGAGAGTCT CCCCAGCATCATCTTCATCTGCCTTCTGTGGGTGATTAGAGTCTACTTTGTTCTGGTCATGCTCGCTTTCGCACG CCAGGCCCTCCGTCTCTGGGTTGCGGTCCCGCGACACACCCAACTCCCGACCCACAGCCGCAACGTTTCAGTCGC CAGCGTTGCCGATATCGATCGGGAGCCTTTCTCCCCCTACAGTCCCGACGGCCAGGGCTGGGAAGGTAAGTTGGG TCGTGTAATGATCAGTATCGGCCACAGCTATTGGCTGGGTGAAGAGGAAGACGGTAACTGGCTCAGCGGCATCAA CCACAAGTTCCGCAACCGTTCGGGCAATACGGAGCTGCCCGGCGCGCTAGAAAGAGAAAGAAGACGACGTTCCGG AACGGGTCCACCAACACCGTCGCCATCTATTGTTCGATCTACTGTCCTTCAACAGCCAATTGCTGAGACTACACC TGCTGGCATGAATGTGAAGATGCAAGATTGGACCGCACCCCGATAA |