Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4509.t1
Gene name
Locationscaffold_09:429621..431282
Strand-
Gene length (bp)1661
Transcript length (bp)1545
Coding sequence length (bp)1545
Protein length (aa) 515

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 8.9E-02 136 173
PF00400 WD40 WD domain, G-beta repeat 9.5E-11 178 215
PF00400 WD40 WD domain, G-beta repeat 6.1E-05 226 264
PF00400 WD40 WD domain, G-beta repeat 1.6E-06 272 305
PF00400 WD40 WD domain, G-beta repeat 2.0E-06 397 429
PF00400 WD40 WD domain, G-beta repeat 2.9E-08 434 471
PF00400 WD40 WD domain, G-beta repeat 8.1E-08 478 512
PF08154 NLE NLE (NUC135) domain 6.4E-06 36 89

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4509.t1
MSTLYPPPSKRQKLVQADKAREQQEIESIPSDLGSVRVQFFDQATGQPTGPAVSVPVADANVKNLETLLNTLQGN
EDDGRVPYRFAYHSEKEEQTIDILRDVYHSLLQTGIKSTEDTVSLFYTPQAVFRVKAVSRCAASIAGHGEAILAT
SFSPVSSSTMVSGSGDSTARVWDCDTGTPKHTLKGHTSWVLAVAYSPNGAMIATGSMDNTVRFWDAKQGTALGAG
LKGHAKWITNLAWEPYHVQESGRPRLASASKDSTVRVWDVVSRVTDHVLTGHKSSVTCVRWGGTGKIYTASHDKT
IKIWNPKDGTLLQTLAAHAHRVNHLALSTDFALRTAYHDHTGKVPVTEAEKVAAARKKFEEAATVNNTIVERLVS
ASDDFTMYLWEPSTSSKPVARMLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTFRGHVGAVYQCC
FSADSRMLVSSSKDTTLKIWDLRTGKLKMDLPGHKDEVFAVDWSPDGQKIASGGKDKAIKIWRN*
Coding >Pro_DTO377G3_2|g4509.t1
ATGTCAACCCTCTATCCTCCTCCCAGCAAGCGCCAAAAGCTCGTTCAGGCTGATAAGGCCCGTGAGCAGCAAGAA
ATTGAGAGTATTCCGTCCGATCTGGGTAGTGTTCGCGTTCAATTCTTCGACCAAGCAACCGGCCAGCCCACCGGG
CCTGCGGTCTCGGTCCCAGTCGCCGATGCCAATGTGAAGAACCTGGAGACTCTCCTCAACACATTACAAGGAAAT
GAAGATGATGGGCGAGTACCATACCGATTCGCCTACCATTCCGAAAAAGAGGAACAAACGATCGACATTCTCCGC
GACGTTTACCACTCGCTACTCCAGACTGGGATCAAGTCCACCGAAGATACGGTATCGCTCTTCTACACACCGCAG
GCGGTTTTCCGAGTGAAAGCCGTTTCACGATGCGCGGCCTCCATCGCAGGCCATGGCGAAGCAATTCTAGCAACA
TCCTTCTCCCCAGTATCTTCCTCCACCATGGTCTCCGGGAGTGGAGACTCAACTGCTCGTGTTTGGGACTGTGAT
ACTGGAACTCCGAAACATACGCTCAAGGGCCACACCAGCTGGGTGCTGGCAGTCGCATACTCGCCGAACGGTGCC
ATGATCGCGACCGGTAGCATGGACAACACCGTGAGGTTCTGGGATGCAAAGCAGGGGACAGCACTAGGTGCGGGG
CTCAAGGGCCACGCAAAGTGGATCACGAATTTGGCCTGGGAGCCATACCACGTGCAGGAGTCAGGGCGGCCGCGC
CTGGCATCCGCCTCCAAGGACTCGACGGTGCGCGTGTGGGATGTTGTCTCGAGAGTAACTGATCATGTGCTCACC
GGCCACAAGTCGTCTGTTACTTGTGTGCGATGGGGTGGTACTGGCAAGATCTACACTGCGTCCCACGACAAGACC
ATTAAGATCTGGAACCCGAAAGACGGCACTCTGCTCCAGACTCTGGCGGCGCATGCCCACCGCGTCAATCACCTC
GCGCTATCGACGGACTTTGCTCTTCGCACCGCCTACCACGACCACACTGGCAAGGTCCCTGTGACCGAGGCTGAG
AAGGTGGCTGCTGCGCGCAAGAAGTTCGAGGAGGCGGCGACGGTGAACAACACTATTGTCGAGCGATTGGTATCG
GCCAGTGACGATTTCACAATGTATCTGTGGGAGCCGTCCACTTCGAGCAAGCCTGTCGCGCGGATGCTGGGCCAC
CAAAAGGAGGTAAACCATGTCACGTTCTCGCCGGACATGGCTTATATCGCCTCAGCCGGATTTGACAACCACGTC
AAGCTGTGGAACGGCCGTGATGGAAAATTCATCACCACCTTCCGCGGCCATGTAGGCGCAGTCTACCAGTGCTGT
TTCTCGGCAGATTCGCGGATGCTAGTGTCCTCATCTAAGGATACCACTCTCAAGATCTGGGACCTGCGCACCGGC
AAGCTCAAGATGGACCTTCCAGGACACAAGGATGAGGTGTTTGCTGTCGACTGGAGTCCTGATGGACAAAAGATC
GCCAGTGGAGGTAAAGACAAGGCGATTAAGATCTGGCGGAACTAG
Transcript >Pro_DTO377G3_2|g4509.t1
ATGTCAACCCTCTATCCTCCTCCCAGCAAGCGCCAAAAGCTCGTTCAGGCTGATAAGGCCCGTGAGCAGCAAGAA
ATTGAGAGTATTCCGTCCGATCTGGGTAGTGTTCGCGTTCAATTCTTCGACCAAGCAACCGGCCAGCCCACCGGG
CCTGCGGTCTCGGTCCCAGTCGCCGATGCCAATGTGAAGAACCTGGAGACTCTCCTCAACACATTACAAGGAAAT
GAAGATGATGGGCGAGTACCATACCGATTCGCCTACCATTCCGAAAAAGAGGAACAAACGATCGACATTCTCCGC
GACGTTTACCACTCGCTACTCCAGACTGGGATCAAGTCCACCGAAGATACGGTATCGCTCTTCTACACACCGCAG
GCGGTTTTCCGAGTGAAAGCCGTTTCACGATGCGCGGCCTCCATCGCAGGCCATGGCGAAGCAATTCTAGCAACA
TCCTTCTCCCCAGTATCTTCCTCCACCATGGTCTCCGGGAGTGGAGACTCAACTGCTCGTGTTTGGGACTGTGAT
ACTGGAACTCCGAAACATACGCTCAAGGGCCACACCAGCTGGGTGCTGGCAGTCGCATACTCGCCGAACGGTGCC
ATGATCGCGACCGGTAGCATGGACAACACCGTGAGGTTCTGGGATGCAAAGCAGGGGACAGCACTAGGTGCGGGG
CTCAAGGGCCACGCAAAGTGGATCACGAATTTGGCCTGGGAGCCATACCACGTGCAGGAGTCAGGGCGGCCGCGC
CTGGCATCCGCCTCCAAGGACTCGACGGTGCGCGTGTGGGATGTTGTCTCGAGAGTAACTGATCATGTGCTCACC
GGCCACAAGTCGTCTGTTACTTGTGTGCGATGGGGTGGTACTGGCAAGATCTACACTGCGTCCCACGACAAGACC
ATTAAGATCTGGAACCCGAAAGACGGCACTCTGCTCCAGACTCTGGCGGCGCATGCCCACCGCGTCAATCACCTC
GCGCTATCGACGGACTTTGCTCTTCGCACCGCCTACCACGACCACACTGGCAAGGTCCCTGTGACCGAGGCTGAG
AAGGTGGCTGCTGCGCGCAAGAAGTTCGAGGAGGCGGCGACGGTGAACAACACTATTGTCGAGCGATTGGTATCG
GCCAGTGACGATTTCACAATGTATCTGTGGGAGCCGTCCACTTCGAGCAAGCCTGTCGCGCGGATGCTGGGCCAC
CAAAAGGAGGTAAACCATGTCACGTTCTCGCCGGACATGGCTTATATCGCCTCAGCCGGATTTGACAACCACGTC
AAGCTGTGGAACGGCCGTGATGGAAAATTCATCACCACCTTCCGCGGCCATGTAGGCGCAGTCTACCAGTGCTGT
TTCTCGGCAGATTCGCGGATGCTAGTGTCCTCATCTAAGGATACCACTCTCAAGATCTGGGACCTGCGCACCGGC
AAGCTCAAGATGGACCTTCCAGGACACAAGGATGAGGTGTTTGCTGTCGACTGGAGTCCTGATGGACAAAAGATC
GCCAGTGGAGGTAAAGACAAGGCGATTAAGATCTGGCGGAACTAG
Gene >Pro_DTO377G3_2|g4509.t1
ATGTCAACCCTCTATCCTCCTCCCAGCAAGCGCCAAAAGCTCGTTCAGGCTGATAAGGCCCGTGAGCAGCAAGAA
ATTGAGAGTATTCCGTCCGATCTGGGTAGTGTTCGCGTTCAATTCTTCGACCAAGCAACCGGCCAGCCCACCGGG
CCTGCGGTCTCGGTCCCAGTCGCCGATGCCAATGTGAAGAACCTGGAGACTCTCCTCAACACATTACAAGGAAAT
GTAAGATTTGAATCTCGTGACTTCTTGGCAATTGGATGTTGTACTGACGTCGATTTCTTTCCAGGAAGATGATGG
GCGAGTACCATACCGATTCGCCTACCATTCCGAAAAAGAGGAACAAACGATCGACATTCTCCGCGACGTTTACCA
CTCGCTACTCCAGACTGGGATCAAGTCCACCGAAGATACGGTATCGCTCTTCTACACACCGCAGGCGGTTTTCCG
AGTGAAAGCCGTTTCACGATGCGCGGCCTCCATCGCAGGCCATGGCGAAGCAATTCTAGCAACATCCTTCTCCCC
AGTATCTTCCTCCACCATGGTCTCCGGGAGTGGAGACTCAACTGCTCGTGTTTGGGACTGTGATACTGGAACTCC
GAAACATACGCTCAAGGGCCACACCAGCTGGGTGCTGGCAGTCGCATACTCGCCGAACGGTGCCATGATCGCGAC
CGGTAGCATGGACAACACCGTGAGGTTCTGGGATGCAAAGCAGGGGACAGCACTAGGTGCGGGGCTCAAGGGCCA
CGCAAAGTGGATCACGAATTTGGCCTGGGAGCCATACCACGTGCAGGAGTCAGGGCGGCCGCGCCTGGCATCCGC
CTCCAAGGACTCGACGGTGCGCGTGTGGGATGTTGTCTCGAGAGTAACTGATCATGTGCTCACCGGCCACAAGTC
GTCTGTTACTTGTGTGCGATGGGGTGGTACTGGCAAGATCTACACTGCGTCCCACGACAAGACCATTAAGATCTG
GAACCCGAAAGACGGCACTCTGCTCCAGACTCTGGCGGCGCATGCCCACCGCGTCAATCACCTCGCGCTATCGAC
GGACTTTGCTCTTCGCACCGCCTACCACGACCACACTGGCAAGGTCCCTGTGACCGAGGCTGAGAAGGTGGCTGC
TGCGCGCAAGAAGTTCGAGGAGGCGGCGACGGTGAACAACACTATTGTCGAGCGATTGGTATCGGCCAGTGACGA
TTTCACAATGTATCTGTGGGAGCCGTCCACTTCGAGCAAGCCTGTCGCGCGGATGCTGGGCCACCAAAAGGAGGT
AAACCATGTCACGTTCTCGCCGGACATGGCTTATATCGCCTCAGCCGGATTTGACAACCACGTCAAGCTGTGGAA
CGGCCGTGATGGAAAGTGAGTGTTTCAGTCCTTTGAGTATAATGATTTATAGCTAACATCGCCCTAGATTCATCA
CCACCTTCCGCGGCCATGTAGGCGCAGTCTACCAGTGCTGTTTCTCGGCAGATTCGCGGATGCTAGTGTCCTCAT
CTAAGGATACCACTCTCAAGATCTGGGACCTGCGCACCGGCAAGCTCAAGATGGACCTTCCAGGACACAAGGATG
AGGTGTTTGCTGTCGACTGGAGTCCTGATGGACAAAAGATCGCCAGTGGAGGTAAAGACAAGGCGATTAAGATCT
GGCGGAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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