© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4503.t1 |
| Gene name | |
| Location | scaffold_09:410104..410907 |
| Strand | - |
| Gene length (bp) | 803 |
| Transcript length (bp) | 729 |
| Coding sequence length (bp) | 729 |
| Protein length (aa) | 243 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08566 | Pam17 | Mitochondrial import protein Pam17 | 2.5E-65 | 79 | 238 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0001405 | PAM complex, Tim23 associated import motor | Yes |
| GO:0098798 | mitochondrial protein-containing complex | No |
| GO:0032991 | protein-containing complex | No |
| GO:0098800 | inner mitochondrial membrane protein complex | No |
| GO:0098796 | membrane protein complex | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 107 | 129 | 22 |
| 2 | 144 | 175 | 31 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4503.t1 MNANPISMSIRTAMFFGRLNPAAPSLASALRPLPQTTARMAKQPTRLSSTTTRPAAATLNLDFRPQAKAALPSTI AVRANSTSTPANDEVKLDWDTFFKLRASRRRYSLVSSVASSAISTTVGVQILSGQDLEHLGATVMGLDPFVVLGL ATAACGAVGWLLGPALGNGIWGLVYRKYKPSVNTKEKEFFDRIRRFRVDPSTNSIANPVPDYYGEKIGSVAGYRN WLKDQRAYNRKRRNFIA* |
| Coding | >Pro_DTO377G3_2|g4503.t1 ATGAACGCCAATCCTATCAGCATGTCCATCCGCACAGCCATGTTCTTTGGCCGACTAAACCCCGCTGCGCCCTCG CTCGCCAGCGCCCTCCGTCCCCTTCCCCAGACAACTGCCCGGATGGCCAAACAGCCCACACGTCTTAGCTCCACG ACAACTCGCCCGGCCGCCGCAACATTGAACCTAGACTTCCGGCCACAAGCCAAGGCTGCGTTGCCATCAACCATT GCTGTGCGCGCAAATTCGACCTCAACACCTGCCAACGACGAAGTCAAGCTCGACTGGGACACCTTCTTCAAGCTC CGCGCTTCCCGCCGCCGATACTCTCTCGTCTCCTCAGTTGCCAGCTCTGCTATCAGCACCACTGTCGGTGTGCAG ATTCTGTCTGGCCAGGACCTTGAACATCTCGGCGCCACAGTTATGGGCCTCGACCCATTTGTTGTCCTGGGATTG GCGACCGCTGCATGCGGTGCTGTCGGTTGGCTTCTGGGACCGGCTCTCGGAAATGGGATTTGGGGACTTGTGTAC AGGAAGTACAAGCCCTCTGTCAACACGAAAGAGAAAGAGTTCTTTGATCGTATTCGCCGGTTCCGTGTTGATCCA TCAACCAACTCCATCGCCAACCCTGTTCCCGATTACTACGGCGAGAAGATTGGTAGCGTGGCGGGCTACCGAAAC TGGCTGAAAGATCAGAGGGCATACAACCGCAAGCGCCGCAACTTCATTGCGTAG |
| Transcript | >Pro_DTO377G3_2|g4503.t1 ATGAACGCCAATCCTATCAGCATGTCCATCCGCACAGCCATGTTCTTTGGCCGACTAAACCCCGCTGCGCCCTCG CTCGCCAGCGCCCTCCGTCCCCTTCCCCAGACAACTGCCCGGATGGCCAAACAGCCCACACGTCTTAGCTCCACG ACAACTCGCCCGGCCGCCGCAACATTGAACCTAGACTTCCGGCCACAAGCCAAGGCTGCGTTGCCATCAACCATT GCTGTGCGCGCAAATTCGACCTCAACACCTGCCAACGACGAAGTCAAGCTCGACTGGGACACCTTCTTCAAGCTC CGCGCTTCCCGCCGCCGATACTCTCTCGTCTCCTCAGTTGCCAGCTCTGCTATCAGCACCACTGTCGGTGTGCAG ATTCTGTCTGGCCAGGACCTTGAACATCTCGGCGCCACAGTTATGGGCCTCGACCCATTTGTTGTCCTGGGATTG GCGACCGCTGCATGCGGTGCTGTCGGTTGGCTTCTGGGACCGGCTCTCGGAAATGGGATTTGGGGACTTGTGTAC AGGAAGTACAAGCCCTCTGTCAACACGAAAGAGAAAGAGTTCTTTGATCGTATTCGCCGGTTCCGTGTTGATCCA TCAACCAACTCCATCGCCAACCCTGTTCCCGATTACTACGGCGAGAAGATTGGTAGCGTGGCGGGCTACCGAAAC TGGCTGAAAGATCAGAGGGCATACAACCGCAAGCGCCGCAACTTCATTGCGTAG |
| Gene | >Pro_DTO377G3_2|g4503.t1 ATGAACGCCAATCCTATCAGCATGTCCATCCGCACAGCCATGTTCTTTGGCCGACTAAACCCCGCTGCGCCCTCG CTCGCCAGCGCCCTCCGTCCCCTTCCCCAGACAACTGCCCGGATGGCCAAACAGCCCACACGTCTTAGCTCCACG ACAACTCGCCCGGCCGCCGCAACATTGAACCTAGACTTCCGGCCACAAGCCAAGGCTGCGTTGCCATCAACCATT GCTGTGCGCGCAAATTCGACCTCAACACCTGCCAACGACGAAGTCAAGCTCGACTGGGACACCTTCTTCAAGCTC CGCGCTTCCCGCCGCCGATACTCTCTCGTCTCCTCAGTTGCCAGCTCTGCTATCAGCACCACTGTCGGTGTGCAG ATTCTGTCTGGCCAGGACCTTGAACATCTCGGCGCCACAGTTATGGGCCTCGACCCATTTGTTGTCCTGGGATTG GCGACCGCTGCATGCGGTGCTGTCGGTTGGCTTCTGGGACCGGCTCTCGGAAATGGGATTTGGGGACTTGTGTAC AGGAAGTACAAGCCCTCTGTCAACACGGTGAGTCATTGCAAAGCAAACGAGTGGCGACTTATGTCTGGTCTGTGC TAATGTGTTTTGTTTTCGTTGCGCAGAAAGAGAAAGAGTTCTTTGATCGTATTCGCCGGTTCCGTGTTGATCCAT CAACCAACTCCATCGCCAACCCTGTTCCCGATTACTACGGCGAGAAGATTGGTAGCGTGGCGGGCTACCGAAACT GGCTGAAAGATCAGAGGGCATACAACCGCAAGCGCCGCAACTTCATTGCGTAG |