Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4500.t1
Gene name
Locationscaffold_09:403555..404599
Strand-
Gene length (bp)1044
Transcript length (bp)732
Coding sequence length (bp)732
Protein length (aa) 244

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04750 Far-17a_AIG1 FAR-17a/AIG1-like protein 4.5E-65 22 218

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 20 37 17
2 52 74 22
3 87 109 22
4 151 173 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4500.t1
MAKSMIDRHPLQWMSSPSRGLSALVHLAGLSSFLWSFKYMHENPNPANQAYGWHFQYLTVIGLSLSTLTFAVALL
ADITLSRRLFLVKNILSTCSAPLEVVISVLYWGLRLIDERLVIPEDIVIPVHADISFHATPSVVMLIDLLLLSPP
WTITALPALALSGTIAFGYWFWIEQCFSQNGWYPYPIFEALPTSGRVGLFTLSAAVMTLSTITLKWLHGRVNGFG
NPMKPESRPGDIKRDDGL*
Coding >Pro_DTO377G3_2|g4500.t1
ATGGCCAAATCTATGATCGATAGGCACCCGCTCCAATGGATGTCGAGTCCTTCACGGGGCTTGTCGGCATTGGTT
CATTTGGCCGGACTTTCGAGTTTTTTGTGGTCATTCAAATACATGCACGAAAACCCTAACCCAGCTAATCAAGCA
TATGGTTGGCATTTTCAATATCTGACCGTGATTGGTCTATCGTTGTCAACACTCACTTTTGCGGTTGCACTACTA
GCGGATATTACCTTGTCCCGGCGACTGTTCCTGGTCAAAAACATCCTATCGACATGTAGTGCCCCCCTTGAGGTT
GTGATCAGCGTTTTGTACTGGGGTCTTCGTTTAATCGATGAACGTTTGGTGATTCCCGAAGATATTGTTATACCC
GTCCATGCCGACATCAGCTTCCACGCAACACCGTCGGTGGTGATGTTGATTGACCTGCTGCTCCTATCCCCACCC
TGGACAATCACTGCACTCCCTGCACTCGCATTGTCTGGCACTATCGCCTTCGGCTACTGGTTCTGGATTGAGCAA
TGCTTCTCCCAGAACGGATGGTACCCATATCCCATCTTCGAAGCACTGCCCACATCAGGTCGTGTTGGCCTATTT
ACTCTCAGTGCCGCTGTCATGACACTGAGCACCATTACCCTCAAGTGGCTCCATGGACGCGTCAATGGATTTGGT
AACCCCATGAAGCCAGAATCCCGTCCAGGCGATATTAAGCGAGATGACGGTTTGTAA
Transcript >Pro_DTO377G3_2|g4500.t1
ATGGCCAAATCTATGATCGATAGGCACCCGCTCCAATGGATGTCGAGTCCTTCACGGGGCTTGTCGGCATTGGTT
CATTTGGCCGGACTTTCGAGTTTTTTGTGGTCATTCAAATACATGCACGAAAACCCTAACCCAGCTAATCAAGCA
TATGGTTGGCATTTTCAATATCTGACCGTGATTGGTCTATCGTTGTCAACACTCACTTTTGCGGTTGCACTACTA
GCGGATATTACCTTGTCCCGGCGACTGTTCCTGGTCAAAAACATCCTATCGACATGTAGTGCCCCCCTTGAGGTT
GTGATCAGCGTTTTGTACTGGGGTCTTCGTTTAATCGATGAACGTTTGGTGATTCCCGAAGATATTGTTATACCC
GTCCATGCCGACATCAGCTTCCACGCAACACCGTCGGTGGTGATGTTGATTGACCTGCTGCTCCTATCCCCACCC
TGGACAATCACTGCACTCCCTGCACTCGCATTGTCTGGCACTATCGCCTTCGGCTACTGGTTCTGGATTGAGCAA
TGCTTCTCCCAGAACGGATGGTACCCATATCCCATCTTCGAAGCACTGCCCACATCAGGTCGTGTTGGCCTATTT
ACTCTCAGTGCCGCTGTCATGACACTGAGCACCATTACCCTCAAGTGGCTCCATGGACGCGTCAATGGATTTGGT
AACCCCATGAAGCCAGAATCCCGTCCAGGCGATATTAAGCGAGATGACGGTTTGTAA
Gene >Pro_DTO377G3_2|g4500.t1
ATGGCCAAATCTATGATCGATAGGCACCCGCTCCAATGGATGTCGAGTCCTTCACGGGGCTTGTCGGCATTGGTT
CATGTAAGTACCATGGTCCTTTCACTTATCATCGCGGTTCAGCGCTAAGGGCTTGCCTTCTAGTTGGCCGGACTT
TCGAGTTTTTTGTGGTCATTCAAATAGTATGGGTCGTCTGCTACGTTGTCCTTTAGAGTTCTTGCTGACATTCTT
GAAGCATGCACGAAAACCCTAACCCAGCGTAAGCTCCCGTCTAGCTTCGATATTGGAAAGCACGCTGAACTTTAT
ATTTGACAGTAATCAAGCATATGGTTGGCATTTTCAATATCTGACCGTGATTGGTCTATCGTTGTCAACACTCAC
TTTTGCGGTTGCACTACTAGCGGATATTACCTTGTCCCGGCGACTGTTCCTGGTCAAAAACATCCTATCGACATG
TAGTGCCCCCCTTGAGGTTGTGATCAGCGTTTTGTACTGGGGTCTTCGTTTAGTAAGTAATTCGATGCTAATTCG
ACAATGTTCTAATCAAAATAAGATCGATGAACGTTTGGTGATTCCCGAAGATATTGTTATACCCGTCCATGCCGG
TACGTCTGTAAAAAGTGCATTTGAGATACCCCTAATAACATGGTTCTAGACATCAGCTTCCACGCAACACCGTCG
GTGGTGATGTTGATTGACCTGCTGCTCCTATCCCCACCCTGGACAATCACTGCACTCCCTGCACTCGCATTGTCT
GGCACTATCGCCTTCGGCTACTGGTTCTGGATTGAGCAATGCTTCTCCCAGAACGGATGGTTCGTGTATGACCCA
GCACCTCCGACGTCAATCGCTAATCAGTCTAGGTACCCATATCCCATCTTCGAAGCACTGCCCACATCAGGTCGT
GTTGGCCTATTTACTCTCAGTGCCGCTGTCATGACACTGAGCACCATTACCCTCAAGTGGCTCCATGGACGCGTC
AATGGATTTGGTAACCCCATGAAGCCAGAATCCCGTCCAGGCGATATTAAGCGAGATGACGGTTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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