Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g4494.t1
Gene name
Location	scaffold_09:392484..394503
Strand	+
Gene length (bp)	2019
Transcript length (bp)	1884
Coding sequence length (bp)	1884
Protein length (aa)	628

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00160	Pro_isomerase	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	1.9E-49	480	624
PF00400	WD40	WD domain, G-beta repeat	3.8E-03	110	145

GO

GO Term	Description	Terminal node
GO:0000413	protein peptidyl-prolyl isomerization	Yes
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	Yes
GO:0005515	protein binding	Yes
GO:0018208	peptidyl-proline modification	No
GO:0043170	macromolecule metabolic process	No
GO:0140096	catalytic activity, acting on a protein	No
GO:0019538	protein metabolic process	No
GO:0008150	biological_process	No
GO:0036211	protein modification process	No
GO:0071704	organic substance metabolic process	No
GO:0008152	metabolic process	No
GO:0005488	binding	No
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No
GO:0043412	macromolecule modification	No
GO:0006807	nitrogen compound metabolic process	No
GO:0016853	isomerase activity	No
GO:0018193	peptidyl-amino acid modification	No
GO:0016859	cis-trans isomerase activity	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0044238	primary metabolic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 38	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	25.08	14.10	36.06
5d_25C	Five days - 25 degrees Celsius	19.94	10.69	29.18
7d_25C	Seven days - 25 degrees Celsius	18.84	9.97	27.71
10d_25C	Ten days - 25 degrees Celsius	15.35	7.72	22.98
7d_15C	Seven days - 15 degrees Celsius	20.61	11.17	30.05
7d_30C	Seven days - 30 degrees Celsius	20.37	10.93	29.81

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.425210	no
3d_25C	7d_25C	0.303367	no
3d_25C	7d_15C	0.514844	no
3d_25C	7d_30C	0.479711	no
3d_25C	10d_25C	0.047513	yes
5d_25C	7d_25C	0.886882	no
5d_25C	7d_15C	0.934061	no
5d_25C	7d_30C	0.958413	no
5d_25C	10d_25C	0.371672	no
7d_25C	7d_15C	0.811370	no
7d_25C	7d_30C	0.834695	no
7d_25C	10d_25C	0.518030	no
7d_15C	7d_30C	0.977890	no
7d_15C	10d_25C	0.301305	no
7d_30C	10d_25C	0.321015	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g4494.t1 MADSGKLAPAAANKRPHSAVEAENSGDSSDDDFGPALPSEVAPKKKRRKLPFEKVYINALPVSARYSKSLMHKDQ LSFVTVAPYTDFVITSSVDGYVKFWKKMAEGIEFVKEFLAHPGEIRGVSVSADGRSFATAGIDKTVKIFDVITFD LLAMYTLDFVPRCVCWVHPRGASLPLLAVTDESSNTIQVFDGRGENPEPLHTLKSIHRSPVVSLAFNNAFDCVVS ADETGMIEYWRAGDGSFEKPDNVFDFKSSTNLFAFKKAKSVPTAITISPSGKHFATVSFPDRQIRVFDFATGKLY RTYDESITTITEMQQAGTAPYELDEVEFGRRLGVERELENEGTRNKVNVSFDESGHFLLYGSLYGVKCINTYTNR VVRVYGREEPFRALNLALYQGQPQRKGIVTVSMAASSNPLLQQAEERDPILLCTGFAKVRFYMFTNETDISKSTR DVQNEKPTQSAAGTGPTATKTAETGTAAILHTTFGDIHLRLYPSAAPRAVENFVTHARNGYYNNTIFHRVIRKFM IQGGDPQGDGTGGESIWGGEFADEFSVLKHDKPYTLSMANAGPNTNASQFFITTEKTPWLDNKHTVFGRAVQGLD IVHKIENVRTHKEKPEVDIKIVSISIS*
Coding	>Pro_DTO377G3_2\|g4494.t1 ATGGCTGACTCTGGCAAACTCGCTCCGGCTGCTGCGAACAAGCGGCCTCATTCTGCTGTCGAGGCTGAGAACAGT GGTGACTCTTCTGACGATGATTTCGGCCCTGCGCTGCCCTCGGAGGTCGCCCCAAAGAAGAAGCGGCGCAAGCTT CCTTTTGAGAAAGTCTACATCAATGCTCTACCAGTCTCCGCACGGTACTCCAAGTCCCTTATGCACAAGGACCAA TTGTCGTTTGTGACGGTTGCCCCCTATACGGACTTTGTGATCACTTCCTCCGTCGATGGATATGTCAAGTTCTGG AAGAAGATGGCAGAAGGCATCGAGTTCGTGAAGGAATTCCTTGCTCACCCAGGCGAGATTCGGGGCGTATCTGTC AGCGCCGACGGCCGCAGTTTCGCAACAGCGGGAATAGACAAGACAGTGAAGATTTTCGATGTTATTACATTTGAT CTCTTGGCGATGTATACACTAGACTTTGTACCTCGATGTGTTTGCTGGGTACACCCGCGTGGGGCCTCGCTGCCC CTGCTAGCCGTAACAGACGAGTCAAGTAATACGATTCAAGTATTCGATGGACGTGGCGAAAATCCCGAACCTTTG CACACTTTGAAGTCGATCCACCGCAGCCCGGTGGTTTCGCTGGCATTCAACAACGCCTTCGACTGTGTCGTCTCA GCCGATGAAACAGGAATGATCGAATATTGGAGAGCCGGAGACGGATCTTTCGAGAAACCCGACAATGTCTTCGAC TTCAAATCCTCAACAAATCTCTTCGCATTTAAGAAAGCCAAATCCGTTCCGACAGCCATCACAATCTCCCCATCC GGCAAACACTTCGCCACGGTCTCCTTCCCAGACCGACAGATTCGAGTATTCGACTTCGCAACAGGGAAGCTTTAC CGCACATACGACGAATCAATAACCACCATCACGGAGATGCAGCAAGCCGGCACAGCACCGTACGAACTGGACGAA GTAGAGTTCGGGCGCCGCCTAGGTGTTGAGCGCGAACTGGAAAACGAAGGAACGCGCAACAAAGTAAACGTTTCT TTCGACGAATCCGGCCACTTCCTCCTCTATGGCTCTCTTTACGGCGTGAAATGTATCAACACCTACACAAACCGC GTAGTCCGCGTCTACGGCCGCGAGGAGCCATTCCGAGCCCTGAATCTCGCATTGTATCAAGGACAACCGCAACGG AAAGGCATCGTGACCGTCTCAATGGCAGCCAGTAGCAACCCGCTCCTCCAGCAAGCCGAAGAACGTGACCCAATC CTCCTCTGCACCGGCTTCGCCAAGGTGCGCTTCTACATGTTCACGAACGAAACAGACATCTCGAAATCCACTCGG GACGTCCAAAACGAAAAGCCAACCCAATCAGCGGCCGGCACTGGTCCAACCGCCACCAAAACGGCCGAGACCGGC ACTGCTGCAATCCTGCACACAACTTTCGGCGATATCCACCTGCGCCTATATCCCTCGGCTGCGCCACGGGCCGTG GAGAACTTTGTCACACACGCCCGGAATGGCTATTACAATAACACGATCTTCCACCGTGTGATTCGCAAATTCATG ATCCAAGGTGGTGACCCGCAAGGCGACGGGACGGGTGGAGAGTCTATCTGGGGCGGGGAATTTGCCGACGAGTTC TCCGTTCTCAAGCACGATAAGCCGTATACGCTCTCGATGGCCAATGCCGGGCCTAATACCAACGCTAGTCAGTTC TTCATCACCACGGAGAAGACGCCGTGGCTGGATAATAAGCACACTGTCTTTGGACGTGCGGTGCAGGGCTTGGAT ATCGTGCATAAGATCGAAAATGTGCGGACGCATAAGGAGAAGCCGGAGGTTGATATTAAGATAGTTAGTATTAGT ATCTCGTGA
Transcript	>Pro_DTO377G3_2\|g4494.t1 ATGGCTGACTCTGGCAAACTCGCTCCGGCTGCTGCGAACAAGCGGCCTCATTCTGCTGTCGAGGCTGAGAACAGT GGTGACTCTTCTGACGATGATTTCGGCCCTGCGCTGCCCTCGGAGGTCGCCCCAAAGAAGAAGCGGCGCAAGCTT CCTTTTGAGAAAGTCTACATCAATGCTCTACCAGTCTCCGCACGGTACTCCAAGTCCCTTATGCACAAGGACCAA TTGTCGTTTGTGACGGTTGCCCCCTATACGGACTTTGTGATCACTTCCTCCGTCGATGGATATGTCAAGTTCTGG AAGAAGATGGCAGAAGGCATCGAGTTCGTGAAGGAATTCCTTGCTCACCCAGGCGAGATTCGGGGCGTATCTGTC AGCGCCGACGGCCGCAGTTTCGCAACAGCGGGAATAGACAAGACAGTGAAGATTTTCGATGTTATTACATTTGAT CTCTTGGCGATGTATACACTAGACTTTGTACCTCGATGTGTTTGCTGGGTACACCCGCGTGGGGCCTCGCTGCCC CTGCTAGCCGTAACAGACGAGTCAAGTAATACGATTCAAGTATTCGATGGACGTGGCGAAAATCCCGAACCTTTG CACACTTTGAAGTCGATCCACCGCAGCCCGGTGGTTTCGCTGGCATTCAACAACGCCTTCGACTGTGTCGTCTCA GCCGATGAAACAGGAATGATCGAATATTGGAGAGCCGGAGACGGATCTTTCGAGAAACCCGACAATGTCTTCGAC TTCAAATCCTCAACAAATCTCTTCGCATTTAAGAAAGCCAAATCCGTTCCGACAGCCATCACAATCTCCCCATCC GGCAAACACTTCGCCACGGTCTCCTTCCCAGACCGACAGATTCGAGTATTCGACTTCGCAACAGGGAAGCTTTAC CGCACATACGACGAATCAATAACCACCATCACGGAGATGCAGCAAGCCGGCACAGCACCGTACGAACTGGACGAA GTAGAGTTCGGGCGCCGCCTAGGTGTTGAGCGCGAACTGGAAAACGAAGGAACGCGCAACAAAGTAAACGTTTCT TTCGACGAATCCGGCCACTTCCTCCTCTATGGCTCTCTTTACGGCGTGAAATGTATCAACACCTACACAAACCGC GTAGTCCGCGTCTACGGCCGCGAGGAGCCATTCCGAGCCCTGAATCTCGCATTGTATCAAGGACAACCGCAACGG AAAGGCATCGTGACCGTCTCAATGGCAGCCAGTAGCAACCCGCTCCTCCAGCAAGCCGAAGAACGTGACCCAATC CTCCTCTGCACCGGCTTCGCCAAGGTGCGCTTCTACATGTTCACGAACGAAACAGACATCTCGAAATCCACTCGG GACGTCCAAAACGAAAAGCCAACCCAATCAGCGGCCGGCACTGGTCCAACCGCCACCAAAACGGCCGAGACCGGC ACTGCTGCAATCCTGCACACAACTTTCGGCGATATCCACCTGCGCCTATATCCCTCGGCTGCGCCACGGGCCGTG GAGAACTTTGTCACACACGCCCGGAATGGCTATTACAATAACACGATCTTCCACCGTGTGATTCGCAAATTCATG ATCCAAGGTGGTGACCCGCAAGGCGACGGGACGGGTGGAGAGTCTATCTGGGGCGGGGAATTTGCCGACGAGTTC TCCGTTCTCAAGCACGATAAGCCGTATACGCTCTCGATGGCCAATGCCGGGCCTAATACCAACGCTAGTCAGTTC TTCATCACCACGGAGAAGACGCCGTGGCTGGATAATAAGCACACTGTCTTTGGACGTGCGGTGCAGGGCTTGGAT ATCGTGCATAAGATCGAAAATGTGCGGACGCATAAGGAGAAGCCGGAGGTTGATATTAAGATAGTTAGTATTAGT ATCTCGTGA
Gene	>Pro_DTO377G3_2\|g4494.t1 ATGGCTGACTCTGGCAAACTCGCTCCGGCTGCTGCGAACAAGCGGCCTCATTCTGCTGTCGAGGCTGAGAACAGT GAGTCCCCTGCCTCATGGACACCGTTCAGACCGCTCCCTCGAACGGAACGCAAGAGATACTAACTGTATGCGATT GTTAGGTGGTGACTCTTCTGACGATGATTTCGGCCCTGCGCTGCCCTCGGAGGTCGCCCCAAAGAAGAAGCGGCG CAAGCTTCCTTTTGAGAAAGTCTACATCAATGCTCTACCAGTCTCCGCACGGTACTCCAAGTCCCTTATGCACAA GGACCAATTGTCGTTTGTGACGGTTGCCCCCTATACGGACTTTGTGATCACTTCCTCCGTCGATGGATATGTCAA GTTCTGGAAGAAGATGGCAGAAGGCATCGAGTTCGTGAAGGAATTCCTTGCTCACCCAGGCGAGATTCGGGGCGT ATCTGTCAGCGCCGACGGCCGCAGTTTCGCAACAGCGGGAATAGACAAGACAGTGAAGATTTTCGATGTTATTAC ATTTGGTAGGTTCAATAATTGTTGCTCTCCCGGTCTAATGACTTACTAACATGGACAGATCTCTTGGCGATGTAT ACACTAGACTTTGTACCTCGATGTGTTTGCTGGGTACACCCGCGTGGGGCCTCGCTGCCCCTGCTAGCCGTAACA GACGAGTCAAGTAATACGATTCAAGTATTCGATGGACGTGGCGAAAATCCCGAACCTTTGCACACTTTGAAGTCG ATCCACCGCAGCCCGGTGGTTTCGCTGGCATTCAACAACGCCTTCGACTGTGTCGTCTCAGCCGATGAAACAGGA ATGATCGAATATTGGAGAGCCGGAGACGGATCTTTCGAGAAACCCGACAATGTCTTCGACTTCAAATCCTCAACA AATCTCTTCGCATTTAAGAAAGCCAAATCCGTTCCGACAGCCATCACAATCTCCCCATCCGGCAAACACTTCGCC ACGGTCTCCTTCCCAGACCGACAGATTCGAGTATTCGACTTCGCAACAGGGAAGCTTTACCGCACATACGACGAA TCAATAACCACCATCACGGAGATGCAGCAAGCCGGCACAGCACCGTACGAACTGGACGAAGTAGAGTTCGGGCGC CGCCTAGGTGTTGAGCGCGAACTGGAAAACGAAGGAACGCGCAACAAAGTAAACGTTTCTTTCGACGAATCCGGC CACTTCCTCCTCTATGGCTCTCTTTACGGCGTGAAATGTATCAACACCTACACAAACCGCGTAGTCCGCGTCTAC GGCCGCGAGGAGCCATTCCGAGCCCTGAATCTCGCATTGTATCAAGGACAACCGCAACGGAAAGGCATCGTGACC GTCTCAATGGCAGCCAGTAGCAACCCGCTCCTCCAGCAAGCCGAAGAACGTGACCCAATCCTCCTCTGCACCGGC TTCGCCAAGGTGCGCTTCTACATGTTCACGAACGAAACAGACATCTCGAAATCCACTCGGGACGTCCAAAACGAA AAGCCAACCCAATCAGCGGCCGGCACTGGTCCAACCGCCACCAAAACGGCCGAGACCGGCACTGCTGCAATCCTG CACACAACTTTCGGCGATATCCACCTGCGCCTATATCCCTCGGCTGCGCCACGGGCCGTGGAGAACTTTGTCACA CACGCCCGGAATGGCTATTACAATAACACGATCTTCCACCGTGTGATTCGCAAATTCATGATCCAAGGTGGTGAC CCGCAAGGCGACGGGACGGGTGGAGAGTCTATCTGGGGCGGGGAATTTGCCGACGAGTTCTCCGTTCTCAAGCAC GATAAGCCGTATACGCTCTCGATGGCCAATGCCGGGCCTAATACCAACGCTAGTCAGTTCTTCATCACCACGGAG AAGACGCCGTGGCTGGATAATAAGCACACTGTCTTTGGACGTGCGGTGCAGGGCTTGGATATCGTGCATAAGATC GAAAATGTGCGGACGCATAAGGAGAAGCCGGAGGTTGATATTAAGATAGTTAGTATTAGTATCTCGTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences