Protein ID | Pro_DTO377G3_2|g448.t1 |
Gene name | |
Location | scaffold_01:1136023..1139097 |
Strand | + |
Gene length (bp) | 3074 |
Transcript length (bp) | 2913 |
Coding sequence length (bp) | 2913 |
Protein length (aa) | 971 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02862 | DDHD | DDHD domain | 5.7E-15 | 745 | 839 |
PF02862 | DDHD | DDHD domain | 3.4E-09 | 882 | 944 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 44.96 | 27.64 | 62.29 |
5d_25C | Five days - 25 degrees Celsius | 62.56 | 38.22 | 86.89 |
7d_25C | Seven days - 25 degrees Celsius | 69.57 | 42.42 | 96.73 |
10d_25C | Ten days - 25 degrees Celsius | 83.88 | 50.44 | 117.32 |
7d_15C | Seven days - 15 degrees Celsius | 70.18 | 42.44 | 97.92 |
7d_30C | Seven days - 30 degrees Celsius | 60.79 | 36.94 | 84.64 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.130487 | no |
3d_25C | 7d_25C | 0.031528 | yes |
3d_25C | 7d_15C | 0.031751 | yes |
3d_25C | 7d_30C | 0.173434 | no |
3d_25C | 10d_25C | 0.001278 | yes |
5d_25C | 7d_25C | 0.710163 | no |
5d_25C | 7d_15C | 0.679930 | no |
5d_25C | 7d_30C | 0.933012 | no |
5d_25C | 10d_25C | 0.196058 | no |
7d_25C | 7d_15C | 0.980755 | no |
7d_25C | 7d_30C | 0.621018 | no |
7d_25C | 10d_25C | 0.461166 | no |
7d_15C | 7d_30C | 0.595507 | no |
7d_15C | 10d_25C | 0.489111 | no |
7d_30C | 10d_25C | 0.145986 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g448.t1 MAGPIHTYGPSCLLVDEEPDLTEFQSLQSPPEIRSHFFYISSLPIDDPLAPLPPPTSHGTSNERVPPTPFSARDN IALEEAWRDLREARKTKSANHRSRPNTSTGTPGIAVPSHESVSNVEHRKAASQEDPSLVGSRGSTLSNPPFFPDD LPSRSHKSSLTFATGSTGMRIHGLGKENRVGSALGDEFKHDTPRGISIDQKRVRSSSINEFNTPKTSSSPLETEN VGEGDEVVGSLQADRSHDASMSGSPFIRAPVSQPQTPLGRSFESSSSREGGEWQAELRPSTAPRSAPKPSGLRTT VSLDQLTQDSEREMTEEPNKQSKIPVGVSRLHLVELPNLKMKPIYWSPLQDISSVVRATWFYKNTMLPVETELAN KLEAGYVYLKPWSDTWQDELNSCVENGADAELKIVHPLWTKQDSQPSTAQVPQSSDSPLDEAEDPLRFDNNRAAG GTSIQSETIKSYLTSSAIYVDAKNAQVLRPSLLPSVSRGRRPLSAIRKGHQIGIPVVRGFSRKSWEHLHPSKSNP IDVRHYIRKTQSKSPSAQGEQICYACKMEESRPSPTDLVLVIHGIGQKLSERMESFHFTHAINAFRREVNMELNN EPVWPHVRQDHGGIMVLPVNWRTNLSLDDPDVESGIEDPASNNFSLADITPQTLPAIRSLISDVMLDIPYYLSHH KPKMVKAVIREANRVYRLWCKNNPGFQDSGRVHLIAHSLGSVMAVDILSYQPTHVPQFDFSNTALRSDIFEFDTG HLFLCGSPVGFFLLLNKASLLPRKGRDKPGSEGDDLLRGVAGEAGQYGCLAVDNLYNIMHTTDPIAYRVNATVDS GLSNSLKMGTIPSSTASFWQSFGSVFRWNSNPSTLLPSTAPARPAAVSKLPSNVELETHDFTREEIAEKRMLLLN DNGQIDYYLSGGGGPLNIQYLNMLSAHSSYWTLGDFVRFLVVEIARKQGREGTLLAFRAEKKKGWKYSKG* |
Coding | >Pro_DTO377G3_2|g448.t1 ATGGCGGGCCCGATCCACACCTACGGTCCGAGTTGCCTGCTTGTGGATGAAGAGCCGGACCTCACCGAATTTCAA TCGCTTCAATCACCACCAGAAATTCGGTCACATTTCTTCTACATCTCATCATTGCCGATTGACGATCCACTGGCT CCCCTGCCTCCACCTACAAGCCATGGGACCAGCAATGAGAGAGTTCCTCCCACGCCATTCTCGGCCAGGGATAAC ATCGCCTTAGAGGAAGCCTGGCGTGATCTACGGGAAGCGAGAAAGACTAAATCCGCGAACCACAGATCCAGGCCA AATACATCGACAGGGACCCCCGGGATAGCTGTGCCCAGTCATGAATCGGTCTCAAATGTCGAACACCGCAAGGCA GCCAGCCAAGAGGATCCCTCGTTGGTTGGCAGTAGAGGAAGCACTCTGAGCAACCCTCCTTTCTTCCCGGACGAT CTGCCCTCCCGCAGTCACAAGAGTTCCCTCACTTTTGCCACAGGCAGTACTGGAATGCGAATCCATGGACTTGGC AAGGAGAATCGCGTGGGCTCCGCATTGGGTGATGAGTTTAAACACGACACTCCCAGAGGAATTTCCATCGATCAG AAAAGAGTGCGATCGTCTTCGATCAATGAGTTCAATACACCCAAAACAAGCAGCTCTCCATTGGAGACTGAAAAT GTGGGTGAAGGCGACGAGGTGGTTGGAAGTCTACAGGCTGATCGTTCTCACGATGCAAGCATGAGTGGCTCTCCC TTTATACGGGCGCCGGTGTCTCAGCCTCAGACGCCGCTTGGTCGCTCATTTGAGTCATCTTCATCAAGAGAAGGA GGCGAATGGCAGGCGGAACTTCGGCCCAGTACTGCTCCACGAAGTGCCCCGAAACCTTCGGGCCTGAGAACGACC GTCAGCCTGGATCAATTGACCCAGGACTCGGAGAGGGAGATGACAGAGGAGCCGAACAAACAGTCAAAGATTCCA GTCGGTGTCTCACGGCTTCATCTAGTCGAGTTACCAAATCTCAAGATGAAACCTATCTACTGGAGTCCTCTTCAG GACATATCAAGTGTGGTCCGAGCTACGTGGTTCTACAAGAATACCATGTTGCCTGTTGAGACTGAACTTGCGAAC AAATTGGAGGCAGGCTACGTTTACTTGAAGCCATGGAGTGACACTTGGCAAGATGAATTAAATAGTTGCGTGGAA AATGGGGCCGATGCCGAGTTGAAAATTGTTCACCCGCTGTGGACAAAACAGGATAGTCAGCCTTCAACTGCACAA GTGCCACAGAGTAGTGATTCGCCTCTGGATGAGGCGGAGGATCCCTTGAGATTCGACAATAATCGAGCTGCTGGT GGCACGTCTATTCAATCTGAGACTATCAAGTCATACCTTACATCAAGTGCCATCTATGTCGATGCAAAAAATGCC CAAGTACTTCGGCCCAGCTTACTTCCCTCAGTGTCAAGGGGACGACGACCTCTTAGTGCAATAAGGAAAGGCCAT CAGATAGGCATACCTGTGGTTCGCGGCTTTAGTCGAAAATCATGGGAACACCTGCACCCGTCAAAATCCAATCCT ATTGATGTGCGCCATTACATCCGCAAGACCCAGTCGAAAAGTCCTTCTGCGCAAGGTGAACAAATATGCTATGCA TGCAAGATGGAAGAATCGCGACCATCTCCAACAGATTTGGTTCTTGTTATCCATGGCATCGGGCAGAAGTTATCA GAGAGGATGGAAAGCTTCCACTTTACTCATGCCATCAATGCATTTCGGCGAGAGGTGAACATGGAGCTCAACAAC GAACCTGTTTGGCCGCATGTGCGTCAAGATCATGGGGGAATTATGGTTCTTCCTGTGAATTGGCGCACGAACTTG TCGTTGGATGACCCCGATGTTGAGTCAGGTATCGAAGACCCAGCTAGCAACAACTTTTCTCTTGCAGATATCACA CCCCAGACTCTGCCCGCTATTCGATCCTTGATCAGCGATGTGATGCTTGACATTCCTTACTATTTGTCGCACCAT AAACCGAAGATGGTCAAGGCGGTGATTAGAGAAGCGAACCGTGTGTATCGCCTCTGGTGTAAAAACAACCCAGGG TTCCAAGACTCCGGCCGCGTACATCTCATCGCTCATTCTCTCGGAAGCGTGATGGCTGTAGACATTCTCAGCTAT CAGCCAACACATGTTCCTCAGTTTGACTTCTCTAATACGGCTTTACGCAGCGACATTTTTGAGTTCGATACTGGA CATCTCTTCCTCTGCGGAAGTCCAGTCGGCTTCTTTCTGCTTCTCAATAAGGCTAGCCTTCTTCCCCGAAAAGGC AGAGACAAGCCAGGTAGCGAAGGTGACGATCTACTTCGTGGGGTTGCCGGCGAAGCAGGTCAATACGGCTGTCTC GCCGTAGATAATCTCTACAATATCATGCACACAACGGACCCAATTGCGTACCGAGTCAATGCAACAGTAGACTCA GGCCTTTCCAACTCTCTCAAAATGGGCACTATCCCCAGCTCCACCGCCAGCTTCTGGCAATCATTTGGAAGCGTC TTTCGCTGGAACTCGAACCCGTCAACATTATTGCCCTCCACAGCTCCTGCCCGCCCCGCAGCAGTATCCAAGCTG CCATCCAATGTCGAGCTCGAGACCCACGACTTCACTCGCGAAGAGATCGCTGAAAAACGCATGCTTCTGCTAAAT GACAACGGTCAAATCGATTATTATCTCTCAGGTGGTGGTGGCCCTTTGAATATACAGTACCTCAACATGCTGAGT GCGCATAGCAGTTACTGGACCTTGGGTGATTTTGTGCGGTTCTTGGTTGTGGAGATTGCGAGAAAGCAGGGGAGA GAAGGAACGCTGCTTGCCTTTCGGGCTGAGAAGAAGAAGGGATGGAAGTATTCAAAGGGTTGA |
Transcript | >Pro_DTO377G3_2|g448.t1 ATGGCGGGCCCGATCCACACCTACGGTCCGAGTTGCCTGCTTGTGGATGAAGAGCCGGACCTCACCGAATTTCAA TCGCTTCAATCACCACCAGAAATTCGGTCACATTTCTTCTACATCTCATCATTGCCGATTGACGATCCACTGGCT CCCCTGCCTCCACCTACAAGCCATGGGACCAGCAATGAGAGAGTTCCTCCCACGCCATTCTCGGCCAGGGATAAC ATCGCCTTAGAGGAAGCCTGGCGTGATCTACGGGAAGCGAGAAAGACTAAATCCGCGAACCACAGATCCAGGCCA AATACATCGACAGGGACCCCCGGGATAGCTGTGCCCAGTCATGAATCGGTCTCAAATGTCGAACACCGCAAGGCA GCCAGCCAAGAGGATCCCTCGTTGGTTGGCAGTAGAGGAAGCACTCTGAGCAACCCTCCTTTCTTCCCGGACGAT CTGCCCTCCCGCAGTCACAAGAGTTCCCTCACTTTTGCCACAGGCAGTACTGGAATGCGAATCCATGGACTTGGC AAGGAGAATCGCGTGGGCTCCGCATTGGGTGATGAGTTTAAACACGACACTCCCAGAGGAATTTCCATCGATCAG AAAAGAGTGCGATCGTCTTCGATCAATGAGTTCAATACACCCAAAACAAGCAGCTCTCCATTGGAGACTGAAAAT GTGGGTGAAGGCGACGAGGTGGTTGGAAGTCTACAGGCTGATCGTTCTCACGATGCAAGCATGAGTGGCTCTCCC TTTATACGGGCGCCGGTGTCTCAGCCTCAGACGCCGCTTGGTCGCTCATTTGAGTCATCTTCATCAAGAGAAGGA GGCGAATGGCAGGCGGAACTTCGGCCCAGTACTGCTCCACGAAGTGCCCCGAAACCTTCGGGCCTGAGAACGACC GTCAGCCTGGATCAATTGACCCAGGACTCGGAGAGGGAGATGACAGAGGAGCCGAACAAACAGTCAAAGATTCCA GTCGGTGTCTCACGGCTTCATCTAGTCGAGTTACCAAATCTCAAGATGAAACCTATCTACTGGAGTCCTCTTCAG GACATATCAAGTGTGGTCCGAGCTACGTGGTTCTACAAGAATACCATGTTGCCTGTTGAGACTGAACTTGCGAAC AAATTGGAGGCAGGCTACGTTTACTTGAAGCCATGGAGTGACACTTGGCAAGATGAATTAAATAGTTGCGTGGAA AATGGGGCCGATGCCGAGTTGAAAATTGTTCACCCGCTGTGGACAAAACAGGATAGTCAGCCTTCAACTGCACAA GTGCCACAGAGTAGTGATTCGCCTCTGGATGAGGCGGAGGATCCCTTGAGATTCGACAATAATCGAGCTGCTGGT GGCACGTCTATTCAATCTGAGACTATCAAGTCATACCTTACATCAAGTGCCATCTATGTCGATGCAAAAAATGCC CAAGTACTTCGGCCCAGCTTACTTCCCTCAGTGTCAAGGGGACGACGACCTCTTAGTGCAATAAGGAAAGGCCAT CAGATAGGCATACCTGTGGTTCGCGGCTTTAGTCGAAAATCATGGGAACACCTGCACCCGTCAAAATCCAATCCT ATTGATGTGCGCCATTACATCCGCAAGACCCAGTCGAAAAGTCCTTCTGCGCAAGGTGAACAAATATGCTATGCA TGCAAGATGGAAGAATCGCGACCATCTCCAACAGATTTGGTTCTTGTTATCCATGGCATCGGGCAGAAGTTATCA GAGAGGATGGAAAGCTTCCACTTTACTCATGCCATCAATGCATTTCGGCGAGAGGTGAACATGGAGCTCAACAAC GAACCTGTTTGGCCGCATGTGCGTCAAGATCATGGGGGAATTATGGTTCTTCCTGTGAATTGGCGCACGAACTTG TCGTTGGATGACCCCGATGTTGAGTCAGGTATCGAAGACCCAGCTAGCAACAACTTTTCTCTTGCAGATATCACA CCCCAGACTCTGCCCGCTATTCGATCCTTGATCAGCGATGTGATGCTTGACATTCCTTACTATTTGTCGCACCAT AAACCGAAGATGGTCAAGGCGGTGATTAGAGAAGCGAACCGTGTGTATCGCCTCTGGTGTAAAAACAACCCAGGG TTCCAAGACTCCGGCCGCGTACATCTCATCGCTCATTCTCTCGGAAGCGTGATGGCTGTAGACATTCTCAGCTAT CAGCCAACACATGTTCCTCAGTTTGACTTCTCTAATACGGCTTTACGCAGCGACATTTTTGAGTTCGATACTGGA CATCTCTTCCTCTGCGGAAGTCCAGTCGGCTTCTTTCTGCTTCTCAATAAGGCTAGCCTTCTTCCCCGAAAAGGC AGAGACAAGCCAGGTAGCGAAGGTGACGATCTACTTCGTGGGGTTGCCGGCGAAGCAGGTCAATACGGCTGTCTC GCCGTAGATAATCTCTACAATATCATGCACACAACGGACCCAATTGCGTACCGAGTCAATGCAACAGTAGACTCA GGCCTTTCCAACTCTCTCAAAATGGGCACTATCCCCAGCTCCACCGCCAGCTTCTGGCAATCATTTGGAAGCGTC TTTCGCTGGAACTCGAACCCGTCAACATTATTGCCCTCCACAGCTCCTGCCCGCCCCGCAGCAGTATCCAAGCTG CCATCCAATGTCGAGCTCGAGACCCACGACTTCACTCGCGAAGAGATCGCTGAAAAACGCATGCTTCTGCTAAAT GACAACGGTCAAATCGATTATTATCTCTCAGGTGGTGGTGGCCCTTTGAATATACAGTACCTCAACATGCTGAGT GCGCATAGCAGTTACTGGACCTTGGGTGATTTTGTGCGGTTCTTGGTTGTGGAGATTGCGAGAAAGCAGGGGAGA GAAGGAACGCTGCTTGCCTTTCGGGCTGAGAAGAAGAAGGGATGGAAGTATTCAAAGGGTTGA |
Gene | >Pro_DTO377G3_2|g448.t1 ATGGCGGGCCCGATCCACACCTACGGTCCGAGTTGCCTGCTTGTGGATGAAGAGCCGGACCTCACCGAATTTCAA TCGCTTCAATCACCACCAGAAATTCGGTCACATTTCTTCTACATCTCATCATTGCCGATTGACGATCCACTGGCT CCCCTGCCTCCACCTACAAGCCATGGGACCAGCAATGAGAGAGTTCCTCCCACGCCATTCTCGGCCAGGGATAAC ATCGCCTTAGAGGAAGCCTGGCGTGATCTACGGGAAGCGAGAAAGACTAAATCCGCGAACCACAGATCCAGGCCA AATACATCGACAGGGACCCCCGGGATAGCTGTGCCCAGTCATGAATCGGTCTCAAATGTCGAACACCGCAAGGCA GCCAGCCAAGAGGATCCCTCGTTGGTTGGCAGTAGAGGAAGCACTCTGAGCAACCCTCCTTTCTTCCCGGACGAT CTGCCCTCCCGCAGTCACAAGAGTTCCCTCACTTTTGCCACAGGCAGTACTGGAATGCGAATCCATGGACTTGGC AAGGAGAATCGCGTGGGCTCCGCATTGGGTGATGAGTTTAAACACGACACTCCCAGAGGAATTTCCATCGATCAG AAAAGAGTGCGATCGTCTTCGATCAATGAGTTCAATACACCCAAAACAAGCAGCTCTCCATTGGAGACTGAAAAT GTGGGTGAAGGCGACGAGGTGGTTGGAAGTCTACAGGCTGATCGTTCTCACGATGCAAGCATGAGTGGCTCTCCC TTTATACGGGCGCCGGTGTCTCAGCCTCAGACGCCGCTTGGTCGCTCATTTGAGTCATCTTCATCAAGAGAAGGA GGCGAATGGCAGGCGGAACTTCGGCCCAGTACTGCTCCACGAAGTGCCCCGAAACCTTCGGGCCTGAGAACGACC GTCAGCCTGGATCAATTGACCCAGGACTCGGAGAGGGAGATGACAGAGGAGCCGAACAAACAGTCAAAGATTCCA GTCGGTGTCTCACGGCTTCATCTAGTCGAGTTACCAAATCTCAAGGTGAGTACAATTTCTACAATTTCTTTACTC GGCTCTGGCTTACAGTAACGCTTTTTTTATAGATGAAACCTATCTACTGGAGTCCTCTTCAGGACATATCAAGTG TGGTCCGAGCTACGTGGTTCTACAAGAATACCATGTTGCCTGTTGAGACTGAACTTGCGAACAAATTGGAGGCAG GCTACGTTTACTTGAAGCCATGGAGTGACACTTGGCAAGATGAATTAAATAGTTGCGTGGAAAATGGGGCCGATG CCGAGTTGAAAATTGTTCACCCGCTGTGGACAAAACAGGATAGTCAGCCTTCAACTGCACAAGTGCCACAGAGTA GTGATTCGCCTCTGGATGAGGCGGAGGATCCCTTGAGATTCGACAATAATCGAGCTGCTGGTGGCACGTCTATTC AATCTGAGACTATCAAGTCATACCTTACATCAAGTGCCATCTATGTCGATGCAAAAAATGCCCAAGTACTTCGGC CCAGCTTACTTCCCTCAGTGTCAAGGGGACGACGACCTCTTAGTGCAATAAGGAAAGGCCATCAGATAGGCATAC CTGTGGTTCGCGGCTTTAGTCGAAAATCATGGGAACACCTGCACCCGTCAAAATCCAATCCTATTGATGTGCGCC ATTACATCCGCAAGACCCAGTCGAAAAGTCCTTCTGCGCAAGGTGAACAAATATGCTATGCATGCAAGATGGAAG AATCGCGACCATCTCCAACAGATTTGGTTCTTGTTATCCATGGCATCGGGCAGAAGTTATCAGAGAGGATGGAAA GCTTCCACTTTACTCATGCCATCAATGCATTTCGGCGAGAGGTGAACATGGAGCTCAACAACGAACCTGTTTGGC CGCATGTGCGTCAAGATCATGGGGGAATTATGGTTCTTCCTGTGAATTGGCGCACGAACTTGTCGTTGGATGACC CCGATGTTGAGTCAGGTATCGAAGACCCAGCTAGCAACAACTTTTCTCTTGCAGATATCACACCCCAGACTCTGC CCGCTATTCGATCCTTGATCAGCGATGTGATGCTTGACATTCCTTACTATTTGTCGCACCATAAACCGAAGATGG TCAAGGCGGTGATTAGAGAAGCGAACCGTGTGTATCGCCTCTGGTGTAAAAACAACCCAGGGTTCCAAGACTCCG GCCGCGTACATCTCATCGCTCATTCTCTCGGAAGCGTGATGGCTGTAGACATTCTCAGCTATCAGCCAACACATG TTCCTCAGTTTGACTTCTCTAATACGGCTTTACGCAGCGACATTTTTGAGTTCGATACTGGACATCTCTTCCTCT GCGGAAGTCCAGTCGGCTTCTTTCTGCTTCTCAATAAGGGTATGTTGAAACCTACATCATTCCGCCTTGTATCTA ACATTATCCCAGCTAGCCTTCTTCCCCGAAAAGGCAGAGACAAGCCAGGTAGCGAAGGTGACGATCTACTTCGTG GGGTTGCCGGCGAAGCAGGTCAATACGGCTGTCTCGCCGTAGATAATCTCTACAATATCATGCACACAACGGACC GTAAGTAGATTGCACAGCCTCTTCGCTTCTTATACTAACCATCTCTACCAGCAATTGCGTACCGAGTCAATGCAA CAGTAGACTCAGGCCTTTCCAACTCTCTCAAAATGGGCACTATCCCCAGCTCCACCGCCAGCTTCTGGCAATCAT TTGGAAGCGTCTTTCGCTGGAACTCGAACCCGTCAACATTATTGCCCTCCACAGCTCCTGCCCGCCCCGCAGCAG TATCCAAGCTGCCATCCAATGTCGAGCTCGAGACCCACGACTTCACTCGCGAAGAGATCGCTGAAAAACGCATGC TTCTGCTAAATGACAACGGTCAAATCGATTATTATCTCTCAGGTGGTGGTGGCCCTTTGAATATACAGTACCTCA ACATGCTGAGTGCGCATAGCAGTTACTGGACCTTGGGTGATTTTGTGCGGTTCTTGGTTGTGGAGATTGCGAGAA AGCAGGGGAGAGAAGGAACGCTGCTTGCCTTTCGGGCTGAGAAGAAGAAGGGATGGAAGTATTCAAAGGGTTGA |