Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4474.t1
Gene name
Locationscaffold_09:345248..346205
Strand-
Gene length (bp)957
Transcript length (bp)957
Coding sequence length (bp)957
Protein length (aa) 319

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 3.8E-13 22 146
PF08659 KR KR domain 1.6E-07 23 113

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4474.t1
MAFLYSQFFVTPTYPTQSFADQTVLITGANVGLGLEAARHITRLGAARVILGVRNVTAGKEAKEDIEKSTGRPSI
CEVWEVDLASHASVLAFGERISKLPQLDVAILNAAVATAQFSTAEGYEQTLTVNVINTLFLSLLILPTLKATRTK
NPSRTPRLTFVVSEVHAWVDFPEWKEDQPMEFVSDQTKAKMDERYPLSKLLEVLLVQELAGRVRGSEVVINMINP
GFCHSQLGREAGLKFKLMKMVLARSTEVGSRTLVAGGAAGLESHGSYMTDGHVENTALSPFVRSEEGRQAREKLW
AELSSILEGVHPGIMQNV*
Coding >Pro_DTO377G3_2|g4474.t1
ATGGCTTTCCTTTACTCACAATTCTTCGTTACTCCTACATATCCAACACAGTCTTTCGCCGACCAAACGGTGCTG
ATCACCGGCGCCAATGTCGGCTTAGGGCTAGAAGCTGCACGTCACATCACGCGACTAGGTGCAGCACGAGTGATC
CTTGGCGTCCGAAATGTGACTGCAGGAAAAGAAGCAAAAGAGGACATTGAAAAATCTACAGGCCGCCCAAGCATC
TGTGAAGTGTGGGAGGTCGATCTGGCTTCCCACGCCTCGGTCCTTGCTTTTGGCGAGCGCATTTCAAAGCTCCCC
CAGCTCGATGTAGCCATTCTCAATGCAGCAGTTGCCACAGCGCAATTTAGCACTGCCGAGGGGTATGAGCAAACT
CTCACGGTTAATGTCATCAACACTCTATTCCTCAGCCTCCTCATCCTGCCAACCCTGAAAGCCACACGAACAAAG
AATCCATCCCGCACGCCCCGACTTACCTTTGTTGTGAGTGAAGTACACGCATGGGTGGATTTCCCAGAATGGAAG
GAAGATCAGCCAATGGAGTTCGTCAGTGACCAAACAAAAGCCAAGATGGACGAGCGGTACCCATTATCGAAGCTA
CTCGAGGTGCTACTTGTGCAGGAACTGGCGGGCCGTGTGCGTGGATCAGAGGTAGTGATCAACATGATCAATCCT
GGTTTCTGCCATTCACAACTCGGACGGGAAGCTGGCTTAAAGTTCAAATTGATGAAAATGGTATTGGCGCGATCC
ACGGAGGTTGGATCTCGAACGCTGGTGGCGGGCGGTGCAGCTGGACTCGAAAGCCACGGTTCATATATGACAGAT
GGACATGTCGAGAATACTGCGCTTTCACCTTTTGTGCGCAGTGAAGAGGGGCGTCAAGCCCGTGAGAAACTATGG
GCTGAGCTGTCGTCGATCCTTGAGGGCGTTCACCCTGGGATTATGCAGAATGTCTGA
Transcript >Pro_DTO377G3_2|g4474.t1
ATGGCTTTCCTTTACTCACAATTCTTCGTTACTCCTACATATCCAACACAGTCTTTCGCCGACCAAACGGTGCTG
ATCACCGGCGCCAATGTCGGCTTAGGGCTAGAAGCTGCACGTCACATCACGCGACTAGGTGCAGCACGAGTGATC
CTTGGCGTCCGAAATGTGACTGCAGGAAAAGAAGCAAAAGAGGACATTGAAAAATCTACAGGCCGCCCAAGCATC
TGTGAAGTGTGGGAGGTCGATCTGGCTTCCCACGCCTCGGTCCTTGCTTTTGGCGAGCGCATTTCAAAGCTCCCC
CAGCTCGATGTAGCCATTCTCAATGCAGCAGTTGCCACAGCGCAATTTAGCACTGCCGAGGGGTATGAGCAAACT
CTCACGGTTAATGTCATCAACACTCTATTCCTCAGCCTCCTCATCCTGCCAACCCTGAAAGCCACACGAACAAAG
AATCCATCCCGCACGCCCCGACTTACCTTTGTTGTGAGTGAAGTACACGCATGGGTGGATTTCCCAGAATGGAAG
GAAGATCAGCCAATGGAGTTCGTCAGTGACCAAACAAAAGCCAAGATGGACGAGCGGTACCCATTATCGAAGCTA
CTCGAGGTGCTACTTGTGCAGGAACTGGCGGGCCGTGTGCGTGGATCAGAGGTAGTGATCAACATGATCAATCCT
GGTTTCTGCCATTCACAACTCGGACGGGAAGCTGGCTTAAAGTTCAAATTGATGAAAATGGTATTGGCGCGATCC
ACGGAGGTTGGATCTCGAACGCTGGTGGCGGGCGGTGCAGCTGGACTCGAAAGCCACGGTTCATATATGACAGAT
GGACATGTCGAGAATACTGCGCTTTCACCTTTTGTGCGCAGTGAAGAGGGGCGTCAAGCCCGTGAGAAACTATGG
GCTGAGCTGTCGTCGATCCTTGAGGGCGTTCACCCTGGGATTATGCAGAATGTCTGA
Gene >Pro_DTO377G3_2|g4474.t1
ATGGCTTTCCTTTACTCACAATTCTTCGTTACTCCTACATATCCAACACAGTCTTTCGCCGACCAAACGGTGCTG
ATCACCGGCGCCAATGTCGGCTTAGGGCTAGAAGCTGCACGTCACATCACGCGACTAGGTGCAGCACGAGTGATC
CTTGGCGTCCGAAATGTGACTGCAGGAAAAGAAGCAAAAGAGGACATTGAAAAATCTACAGGCCGCCCAAGCATC
TGTGAAGTGTGGGAGGTCGATCTGGCTTCCCACGCCTCGGTCCTTGCTTTTGGCGAGCGCATTTCAAAGCTCCCC
CAGCTCGATGTAGCCATTCTCAATGCAGCAGTTGCCACAGCGCAATTTAGCACTGCCGAGGGGTATGAGCAAACT
CTCACGGTTAATGTCATCAACACTCTATTCCTCAGCCTCCTCATCCTGCCAACCCTGAAAGCCACACGAACAAAG
AATCCATCCCGCACGCCCCGACTTACCTTTGTTGTGAGTGAAGTACACGCATGGGTGGATTTCCCAGAATGGAAG
GAAGATCAGCCAATGGAGTTCGTCAGTGACCAAACAAAAGCCAAGATGGACGAGCGGTACCCATTATCGAAGCTA
CTCGAGGTGCTACTTGTGCAGGAACTGGCGGGCCGTGTGCGTGGATCAGAGGTAGTGATCAACATGATCAATCCT
GGTTTCTGCCATTCACAACTCGGACGGGAAGCTGGCTTAAAGTTCAAATTGATGAAAATGGTATTGGCGCGATCC
ACGGAGGTTGGATCTCGAACGCTGGTGGCGGGCGGTGCAGCTGGACTCGAAAGCCACGGTTCATATATGACAGAT
GGACATGTCGAGAATACTGCGCTTTCACCTTTTGTGCGCAGTGAAGAGGGGCGTCAAGCCCGTGAGAAACTATGG
GCTGAGCTGTCGTCGATCCTTGAGGGCGTTCACCCTGGGATTATGCAGAATGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail