Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4470.t1
Gene name
Locationscaffold_09:334657..335902
Strand-
Gene length (bp)1245
Transcript length (bp)1194
Coding sequence length (bp)1194
Protein length (aa) 398

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 1.1E-31 236 389
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 4.0E-18 7 119
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 1.8E-18 124 223
PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain 1.1E-14 253 370

GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0016491 oxidoreductase activity No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4470.t1
MGMTGFTEEQLTVREAISHICSKFPNTYWQERDQQEKDPKEFHAALAKDGWLGIALPESLGGAGLGISEATMMMQ
TITQSGAGMAGAQAIHANVYATQPLAKFGTKEQLETTIPNIINGTWRTCFGVTEPNTGLETLKLTTLASKTADGY
SVTGQKIWITCAQVASKMILLARTTPLEEVKKTSEGLSLFCIDLDRDSPGLDLRKIKKMGGRAVDANEVFFDNYK
IPANTLIGEENQGFKIILHGMNAERCLLAGEALGLGYAALEKASEYAKDRVVFGRPIGQNQGVAHPLADAFMKLE
AAKLATYHAARLYDTNDGSVPFHEIGVACNSAKYLAAEAAFTACERAVLAHGGMGYAVEYDVERYMRDCFVPRIA
PVSREMILNYVSEKVLGLPRSY*
Coding >Pro_DTO377G3_2|g4470.t1
ATGGGGATGACTGGCTTTACGGAAGAGCAGCTTACAGTCCGCGAAGCGATCTCCCATATTTGTTCCAAATTCCCA
AATACATATTGGCAGGAGCGTGATCAACAAGAGAAAGATCCAAAGGAATTCCATGCAGCATTGGCTAAAGATGGA
TGGCTTGGCATTGCTTTGCCCGAATCCCTCGGAGGCGCTGGTCTAGGTATCTCCGAGGCCACAATGATGATGCAG
ACTATCACACAGTCTGGCGCAGGTATGGCTGGTGCTCAGGCCATTCACGCCAACGTCTATGCGACACAGCCATTG
GCCAAGTTTGGCACCAAGGAACAACTAGAGACAACCATCCCGAATATTATCAACGGCACATGGCGCACATGCTTT
GGTGTCACCGAGCCAAACACTGGCCTTGAGACCCTCAAACTCACAACCTTGGCTAGCAAAACCGCTGACGGATAT
TCGGTCACCGGCCAGAAGATCTGGATTACCTGTGCGCAAGTGGCTTCAAAGATGATCCTTCTCGCCCGAACTACA
CCTCTCGAAGAAGTTAAGAAGACCAGCGAGGGTCTCTCCTTATTTTGTATCGATCTAGACCGTGATAGCCCTGGC
TTGGATCTGCGCAAGATCAAGAAGATGGGTGGACGCGCTGTGGATGCCAACGAGGTCTTCTTTGATAATTATAAG
ATTCCTGCAAATACATTAATTGGCGAGGAGAACCAAGGCTTCAAGATTATCCTCCACGGCATGAATGCAGAGAGA
TGTCTTTTGGCCGGTGAAGCACTTGGTCTTGGATATGCCGCCCTTGAAAAAGCCTCGGAGTACGCTAAGGACCGT
GTTGTCTTTGGACGGCCAATTGGTCAGAACCAGGGTGTGGCGCATCCATTGGCTGATGCTTTCATGAAACTGGAG
GCGGCAAAGCTGGCTACCTACCACGCAGCACGTCTCTATGATACCAACGATGGATCAGTGCCTTTCCATGAAATT
GGTGTCGCGTGTAACAGTGCCAAGTATTTGGCTGCAGAGGCTGCTTTCACGGCGTGTGAGCGGGCAGTTCTGGCG
CATGGTGGTATGGGATATGCGGTTGAGTACGATGTCGAACGATATATGCGCGATTGTTTCGTGCCTCGTATCGCA
CCTGTGAGTCGGGAGATGATCTTGAATTATGTGAGCGAGAAGGTACTCGGTTTACCTAGAAGCTACTAG
Transcript >Pro_DTO377G3_2|g4470.t1
ATGGGGATGACTGGCTTTACGGAAGAGCAGCTTACAGTCCGCGAAGCGATCTCCCATATTTGTTCCAAATTCCCA
AATACATATTGGCAGGAGCGTGATCAACAAGAGAAAGATCCAAAGGAATTCCATGCAGCATTGGCTAAAGATGGA
TGGCTTGGCATTGCTTTGCCCGAATCCCTCGGAGGCGCTGGTCTAGGTATCTCCGAGGCCACAATGATGATGCAG
ACTATCACACAGTCTGGCGCAGGTATGGCTGGTGCTCAGGCCATTCACGCCAACGTCTATGCGACACAGCCATTG
GCCAAGTTTGGCACCAAGGAACAACTAGAGACAACCATCCCGAATATTATCAACGGCACATGGCGCACATGCTTT
GGTGTCACCGAGCCAAACACTGGCCTTGAGACCCTCAAACTCACAACCTTGGCTAGCAAAACCGCTGACGGATAT
TCGGTCACCGGCCAGAAGATCTGGATTACCTGTGCGCAAGTGGCTTCAAAGATGATCCTTCTCGCCCGAACTACA
CCTCTCGAAGAAGTTAAGAAGACCAGCGAGGGTCTCTCCTTATTTTGTATCGATCTAGACCGTGATAGCCCTGGC
TTGGATCTGCGCAAGATCAAGAAGATGGGTGGACGCGCTGTGGATGCCAACGAGGTCTTCTTTGATAATTATAAG
ATTCCTGCAAATACATTAATTGGCGAGGAGAACCAAGGCTTCAAGATTATCCTCCACGGCATGAATGCAGAGAGA
TGTCTTTTGGCCGGTGAAGCACTTGGTCTTGGATATGCCGCCCTTGAAAAAGCCTCGGAGTACGCTAAGGACCGT
GTTGTCTTTGGACGGCCAATTGGTCAGAACCAGGGTGTGGCGCATCCATTGGCTGATGCTTTCATGAAACTGGAG
GCGGCAAAGCTGGCTACCTACCACGCAGCACGTCTCTATGATACCAACGATGGATCAGTGCCTTTCCATGAAATT
GGTGTCGCGTGTAACAGTGCCAAGTATTTGGCTGCAGAGGCTGCTTTCACGGCGTGTGAGCGGGCAGTTCTGGCG
CATGGTGGTATGGGATATGCGGTTGAGTACGATGTCGAACGATATATGCGCGATTGTTTCGTGCCTCGTATCGCA
CCTGTGAGTCGGGAGATGATCTTGAATTATGTGAGCGAGAAGGTACTCGGTTTACCTAGAAGCTACTAG
Gene >Pro_DTO377G3_2|g4470.t1
ATGGGGATGACTGGCTTTACGGAAGAGCAGCTTACAGTCCGCGAAGCGATCTCCCATATTTGTTCCAAATTCCCA
AATACATATTGGCAGGAGCGTGATCAACAAGAGAAAGATCCAAAGGAATTCCATGCAGCATTGGCTAAAGATGGA
TGGCTTGGCATTGCTTTGCCCGAATCCCTCGGAGGCGCTGGTCTAGGTACAGTTGCACAGATTTCTTATTCTCAT
CCATATTTCTGACCTTGTTCAGGTATCTCCGAGGCCACAATGATGATGCAGACTATCACACAGTCTGGCGCAGGT
ATGGCTGGTGCTCAGGCCATTCACGCCAACGTCTATGCGACACAGCCATTGGCCAAGTTTGGCACCAAGGAACAA
CTAGAGACAACCATCCCGAATATTATCAACGGCACATGGCGCACATGCTTTGGTGTCACCGAGCCAAACACTGGC
CTTGAGACCCTCAAACTCACAACCTTGGCTAGCAAAACCGCTGACGGATATTCGGTCACCGGCCAGAAGATCTGG
ATTACCTGTGCGCAAGTGGCTTCAAAGATGATCCTTCTCGCCCGAACTACACCTCTCGAAGAAGTTAAGAAGACC
AGCGAGGGTCTCTCCTTATTTTGTATCGATCTAGACCGTGATAGCCCTGGCTTGGATCTGCGCAAGATCAAGAAG
ATGGGTGGACGCGCTGTGGATGCCAACGAGGTCTTCTTTGATAATTATAAGATTCCTGCAAATACATTAATTGGC
GAGGAGAACCAAGGCTTCAAGATTATCCTCCACGGCATGAATGCAGAGAGATGTCTTTTGGCCGGTGAAGCACTT
GGTCTTGGATATGCCGCCCTTGAAAAAGCCTCGGAGTACGCTAAGGACCGTGTTGTCTTTGGACGGCCAATTGGT
CAGAACCAGGGTGTGGCGCATCCATTGGCTGATGCTTTCATGAAACTGGAGGCGGCAAAGCTGGCTACCTACCAC
GCAGCACGTCTCTATGATACCAACGATGGATCAGTGCCTTTCCATGAAATTGGTGTCGCGTGTAACAGTGCCAAG
TATTTGGCTGCAGAGGCTGCTTTCACGGCGTGTGAGCGGGCAGTTCTGGCGCATGGTGGTATGGGATATGCGGTT
GAGTACGATGTCGAACGATATATGCGCGATTGTTTCGTGCCTCGTATCGCACCTGTGAGTCGGGAGATGATCTTG
AATTATGTGAGCGAGAAGGTACTCGGTTTACCTAGAAGCTACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail