Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4469.t1
Gene name
Locationscaffold_09:332275..334209
Strand-
Gene length (bp)1934
Transcript length (bp)1824
Coding sequence length (bp)1824
Protein length (aa) 608

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00920 ILVD_EDD Dehydratase family 3.3E-207 70 601

GO

GO Term Description Terminal node
GO:0016836 hydro-lyase activity Yes
GO:0016835 carbon-oxygen lyase activity No
GO:0016829 lyase activity No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4469.t1
MLPQTRARVPAALRSLSRSNPVRSLSTTLPRFQNDKPLNKVSSTITQPKAQGASQAMLYAVGLKEEDMNKAQVGI
SSVWFNGNPCNMHLLDLSNKVRQGVQDQDLIGFQFNTVGVSDAISMGTSGMRYSLQSRDLIADSVETVMGGQWYD
ANISIPGCDKNMPGVLMAMGRINRPSLMVYGGTIKPGCAATQNNADIDIVSAFQAYGQFLTKEITEPQRFDVIRH
ACPGEGACGGMYTANTMASAIETMGMTLPGSSSNPANSQAKYLECLAAGGAIKKLLAEDIRPRDILTRQAFENAM
VVVNITGGSTNAVLHLIAIADSVGIKLTIDDFQTVSDRIPFLADLKPSGKYVMADLFAVGGTPALLKLLLKEGLI
DGSGMTVTGETMAQNLEKLPGFPEDQKIIRPFSNPIKKTGHIQILRGSLAPGGSVGKITGKEGMSFTGKARVFDS
EDDFIAALERGEIKKEEKTVVVIRYCGPKGGPGMPEMLKPSSALMGYGLGNSCALITDGRFSGGSHGFLIGHIVP
EAAVGGPIGLVNDGDIITIDANKRLLDVELSDAEFADRKEKWEARKAAGNLPETGLTMRGTLGKYARNVQDASLG
CITDAVE*
Coding >Pro_DTO377G3_2|g4469.t1
ATGCTTCCTCAGACTCGGGCCCGTGTGCCCGCCGCTCTTCGGAGCCTGTCCAGGTCTAACCCTGTTCGGTCTCTC
TCAACCACTCTCCCTCGTTTCCAGAATGATAAACCCCTCAACAAGGTCTCTAGCACCATCACCCAACCCAAGGCA
CAGGGTGCTTCCCAGGCAATGCTGTACGCAGTCGGGTTGAAGGAGGAGGACATGAACAAGGCCCAGGTCGGAATT
TCGTCAGTGTGGTTCAACGGCAACCCTTGCAACATGCATTTGCTCGATCTGAGCAACAAGGTTCGCCAGGGTGTC
CAGGATCAGGACTTGATTGGTTTCCAATTCAACACTGTCGGTGTCAGTGATGCAATCAGTATGGGTACCTCTGGA
ATGCGTTACTCTTTGCAGAGTCGTGACCTTATTGCCGATTCCGTTGAGACCGTGATGGGTGGACAGTGGTACGAT
GCCAATATCAGTATTCCCGGATGTGACAAGAACATGCCCGGTGTTCTAATGGCTATGGGCCGTATCAACCGCCCC
AGTTTGATGGTTTACGGTGGAACCATCAAGCCCGGCTGCGCTGCTACCCAGAACAACGCCGATATCGATATTGTG
TCTGCTTTCCAAGCCTACGGTCAGTTCCTTACCAAGGAGATCACCGAGCCCCAGCGCTTTGACGTCATCCGCCAC
GCCTGCCCCGGCGAGGGAGCTTGTGGTGGTATGTACACTGCCAACACCATGGCTTCCGCTATTGAGACCATGGGT
ATGACCCTTCCTGGTTCATCCTCCAACCCGGCCAACTCCCAGGCCAAGTATCTTGAGTGTCTCGCCGCTGGTGGT
GCCATCAAGAAGCTGCTCGCCGAGGACATTCGCCCTCGCGATATTCTTACCCGTCAGGCCTTTGAGAACGCCATG
GTTGTTGTCAATATCACGGGTGGATCTACCAACGCTGTGCTGCACTTGATTGCCATTGCTGACTCGGTCGGCATC
AAGCTCACCATTGATGACTTCCAGACTGTGTCCGACCGCATTCCCTTCCTGGCTGATCTCAAGCCCTCTGGCAAG
TACGTCATGGCCGATCTCTTCGCCGTTGGTGGTACCCCAGCACTCCTGAAGCTGCTCCTCAAGGAGGGTCTTATT
GATGGCTCTGGTATGACCGTTACTGGTGAGACCATGGCCCAGAACCTGGAGAAGCTCCCTGGCTTCCCCGAGGAC
CAGAAGATCATCCGCCCGTTCTCCAACCCTATCAAGAAGACCGGTCACATTCAGATTCTCCGTGGCTCTCTCGCC
CCCGGTGGTAGTGTCGGCAAGATCACCGGCAAGGAGGGCATGTCCTTCACAGGAAAGGCCCGGGTGTTCGATAGT
GAAGATGACTTCATCGCCGCTCTGGAGCGTGGGGAAATCAAGAAGGAGGAGAAGACCGTTGTTGTCATTCGCTAC
TGCGGTCCTAAGGGTGGCCCTGGAATGCCTGAAATGCTCAAGCCCTCTAGTGCCCTCATGGGCTATGGTCTTGGA
AACTCCTGTGCTCTCATCACTGACGGTCGTTTCTCCGGTGGTTCTCACGGTTTCTTGATCGGTCACATTGTCCCC
GAGGCTGCCGTCGGTGGTCCCATCGGTCTTGTAAATGATGGTGACATCATCACCATCGATGCCAACAAGCGCCTT
CTTGATGTTGAACTCTCCGATGCTGAGTTTGCTGACCGCAAAGAGAAGTGGGAAGCCCGCAAGGCTGCTGGAAAC
CTCCCTGAGACCGGTCTTACCATGCGTGGTACTCTGGGTAAATATGCCAGAAACGTCCAGGACGCCAGCCTGGGC
TGTATCACTGATGCTGTAGAGTAA
Transcript >Pro_DTO377G3_2|g4469.t1
ATGCTTCCTCAGACTCGGGCCCGTGTGCCCGCCGCTCTTCGGAGCCTGTCCAGGTCTAACCCTGTTCGGTCTCTC
TCAACCACTCTCCCTCGTTTCCAGAATGATAAACCCCTCAACAAGGTCTCTAGCACCATCACCCAACCCAAGGCA
CAGGGTGCTTCCCAGGCAATGCTGTACGCAGTCGGGTTGAAGGAGGAGGACATGAACAAGGCCCAGGTCGGAATT
TCGTCAGTGTGGTTCAACGGCAACCCTTGCAACATGCATTTGCTCGATCTGAGCAACAAGGTTCGCCAGGGTGTC
CAGGATCAGGACTTGATTGGTTTCCAATTCAACACTGTCGGTGTCAGTGATGCAATCAGTATGGGTACCTCTGGA
ATGCGTTACTCTTTGCAGAGTCGTGACCTTATTGCCGATTCCGTTGAGACCGTGATGGGTGGACAGTGGTACGAT
GCCAATATCAGTATTCCCGGATGTGACAAGAACATGCCCGGTGTTCTAATGGCTATGGGCCGTATCAACCGCCCC
AGTTTGATGGTTTACGGTGGAACCATCAAGCCCGGCTGCGCTGCTACCCAGAACAACGCCGATATCGATATTGTG
TCTGCTTTCCAAGCCTACGGTCAGTTCCTTACCAAGGAGATCACCGAGCCCCAGCGCTTTGACGTCATCCGCCAC
GCCTGCCCCGGCGAGGGAGCTTGTGGTGGTATGTACACTGCCAACACCATGGCTTCCGCTATTGAGACCATGGGT
ATGACCCTTCCTGGTTCATCCTCCAACCCGGCCAACTCCCAGGCCAAGTATCTTGAGTGTCTCGCCGCTGGTGGT
GCCATCAAGAAGCTGCTCGCCGAGGACATTCGCCCTCGCGATATTCTTACCCGTCAGGCCTTTGAGAACGCCATG
GTTGTTGTCAATATCACGGGTGGATCTACCAACGCTGTGCTGCACTTGATTGCCATTGCTGACTCGGTCGGCATC
AAGCTCACCATTGATGACTTCCAGACTGTGTCCGACCGCATTCCCTTCCTGGCTGATCTCAAGCCCTCTGGCAAG
TACGTCATGGCCGATCTCTTCGCCGTTGGTGGTACCCCAGCACTCCTGAAGCTGCTCCTCAAGGAGGGTCTTATT
GATGGCTCTGGTATGACCGTTACTGGTGAGACCATGGCCCAGAACCTGGAGAAGCTCCCTGGCTTCCCCGAGGAC
CAGAAGATCATCCGCCCGTTCTCCAACCCTATCAAGAAGACCGGTCACATTCAGATTCTCCGTGGCTCTCTCGCC
CCCGGTGGTAGTGTCGGCAAGATCACCGGCAAGGAGGGCATGTCCTTCACAGGAAAGGCCCGGGTGTTCGATAGT
GAAGATGACTTCATCGCCGCTCTGGAGCGTGGGGAAATCAAGAAGGAGGAGAAGACCGTTGTTGTCATTCGCTAC
TGCGGTCCTAAGGGTGGCCCTGGAATGCCTGAAATGCTCAAGCCCTCTAGTGCCCTCATGGGCTATGGTCTTGGA
AACTCCTGTGCTCTCATCACTGACGGTCGTTTCTCCGGTGGTTCTCACGGTTTCTTGATCGGTCACATTGTCCCC
GAGGCTGCCGTCGGTGGTCCCATCGGTCTTGTAAATGATGGTGACATCATCACCATCGATGCCAACAAGCGCCTT
CTTGATGTTGAACTCTCCGATGCTGAGTTTGCTGACCGCAAAGAGAAGTGGGAAGCCCGCAAGGCTGCTGGAAAC
CTCCCTGAGACCGGTCTTACCATGCGTGGTACTCTGGGTAAATATGCCAGAAACGTCCAGGACGCCAGCCTGGGC
TGTATCACTGATGCTGTAGAGTAA
Gene >Pro_DTO377G3_2|g4469.t1
ATGCTTCCTCAGACTCGGGCCCGTGTGCCCGCCGCTCTTCGGAGCCTGTCCAGGTCTAACCCTGTGTAAGTTGGT
TCAATTGTGTCGCGTCAATTCGGTTACTGACTTCTTCTTCTTCTTAGTCGGTCTCTCTCAACCACTCTCCCTCGT
TTCCAGAATGATAAACCCCTCAACAAGGTCTCTAGCACCATCACCCAACCCAAGGCACAGGGTGCTTCCCAGGCA
ATGCTGTACGCAGTCGGGTTGAAGGAGGAGGACATGAACAAGGCCCAGGTCGGAATTTCGTCAGTGTGGTTCAAC
GGCAACCCTTGCAACATGCATTTGCTCGATCTGAGCAACAAGGTTCGCCAGGGTGTCCAGGATCAGGACTTGATT
GGTTTCCAATTCAACACTGTCGGTGTCAGTGATGCAATCAGTATGGGTACCTCTGGAATGCGTTACTCTTTGCAG
AGTCGTGACCTTATTGCCGATTCCGTTGAGACCGTGATGGGTGGACAGTGGTACGATGCCAATATCAGTATTCCC
GGATGTGACAAGAACATGCCCGGTGTTCTAATGGCTATGGGCCGTATCAACCGCCCCAGTTTGATGGTTTACGGT
GGAACCATCAAGCCCGGCTGCGCTGCTACCCAGAACAACGCCGATATCGATATTGTGTCTGCTTTCCAAGCCTAC
GGTCAGTTCCTTACCAAGGAGATCACCGAGCCCCAGCGCTTTGACGTCATCCGCCACGCCTGCCCCGGCGAGGGA
GCTTGTGGTGGTATGTACACTGCCAACACCATGGCTTCCGCTATTGAGACCATGGGTATGACCCTTCCTGGTTCA
TCCTCCAACCCGGCCAACTCCCAGGCCAAGTATCTTGAGTGTCTCGCCGCTGGTGGTGCCATCAAGAAGCTGCTC
GCCGAGGACATTCGCCCTCGCGATATTCTTACCCGTCAGGCCTTTGAGAACGCCATGGTTGTTGTCAATATCACG
GGTGGATCTACCAACGCTGTGCTGCACTTGATTGCCATTGCTGACTCGGTCGGCATCAAGCTCACCATTGATGAC
TTCCAGACTGTGTCCGACCGCATTCCCTTCCTGGCTGATCTCAAGCCCTCTGGCAAGTACGTCATGGCCGATCTC
TTCGCCGTTGGTGGTACCCCAGCACTCCTGAAGCTGCTCCTCAAGGAGGGTCTTATTGATGGCTCTGGTATGACC
GTTACTGGTGAGACCATGGCCCAGAACCTGGAGAAGCTCCCTGGCTTCCCCGAGGACCAGAAGATCATCCGCCCG
TTCTCCAACCCTATCAAGAAGACCGGTCACATTCAGATTCTCCGTGGCTCTCTCGCCCCCGGTGGTAGTGTCGGC
AAGATCACCGGCAAGGAGGGCATGTCCTTCACAGGAAAGGCCCGGGTGTTCGATAGTGAAGATGACTTCATCGCC
GCTCTGGAGCGTGGGGAAATCAAGAAGGAGGAGAAGACCGTTGTTGTCATTCGCTACTGCGGTCCTAAGGGTGGC
CCTGGAATGCCTGGTATGTGCAACAAATCTACCTGATCTCCGACTATAATGCTAACATTCTTATAGAAATGCTCA
AGCCCTCTAGTGCCCTCATGGGCTATGGTCTTGGAAACTCCTGTGCTCTCATCACTGACGGTCGTTTCTCCGGTG
GTTCTCACGGTTTCTTGATCGGTCACATTGTCCCCGAGGCTGCCGTCGGTGGTCCCATCGGTCTTGTAAATGATG
GTGACATCATCACCATCGATGCCAACAAGCGCCTTCTTGATGTTGAACTCTCCGATGCTGAGTTTGCTGACCGCA
AAGAGAAGTGGGAAGCCCGCAAGGCTGCTGGAAACCTCCCTGAGACCGGTCTTACCATGCGTGGTACTCTGGGTA
AATATGCCAGAAACGTCCAGGACGCCAGCCTGGGCTGTATCACTGATGCTGTAGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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