Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4460.t1
Gene name
Locationscaffold_09:299631..300583
Strand-
Gene length (bp)952
Transcript length (bp)771
Coding sequence length (bp)771
Protein length (aa) 257

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.1E-47 8 193
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 2.8E-46 13 251
PF08659 KR KR domain 1.3E-05 9 154
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.3E-04 9 105

GO

GO Term Description Terminal node
GO:0050662 coenzyme binding Yes
GO:0003824 catalytic activity Yes
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4460.t1
MSLLQDIVVIITGSASGIGLATATAALSQGARILGVDVSSAPVSLNEHPNYKFMQGDLTHETTPRQVVETCIKEF
GGRIDGLLNIAGIMDQNSSVDSLSDYMWERCIAVNLTAPVKLMREVIPIMRQQQSGSIVNVGSKAATSGASSGVA
YTASKHGLMGATKNVAWRYKQEGIRCNAVCPGGVPTGIVQASDPSTWDKDALGTMSLIHQAHAADRQKGLGVEAE
DIADCLLFLISSQSKRINGAIIPIDNAWSVI*
Coding >Pro_DTO377G3_2|g4460.t1
ATGTCGCTGCTTCAAGACATTGTTGTGATAATCACCGGTAGCGCCTCTGGAATTGGACTGGCAACAGCCACAGCA
GCTCTAAGCCAAGGGGCGAGAATTCTAGGTGTTGATGTCTCATCAGCACCTGTCTCACTCAATGAACATCCAAAT
TACAAATTCATGCAAGGTGATCTCACCCATGAGACGACACCAAGGCAGGTGGTAGAGACCTGTATCAAAGAGTTT
GGTGGACGAATCGATGGTCTGCTCAACATTGCTGGTATCATGGACCAGAATTCCAGCGTTGATAGTCTCTCAGAT
TATATGTGGGAACGATGCATTGCAGTCAATTTGACAGCTCCAGTGAAGCTCATGCGTGAGGTTATTCCTATTATG
CGACAGCAACAGAGTGGTAGTATTGTCAACGTCGGCAGCAAGGCAGCTACGAGTGGTGCTTCGTCCGGCGTTGCT
TACACAGCTAGTAAACATGGGCTGATGGGCGCAACCAAAAATGTTGCATGGAGGTACAAACAAGAGGGAATTCGC
TGCAATGCCGTTTGTCCCGGGGGAGTTCCAACCGGTATAGTACAGGCCTCTGACCCAAGCACTTGGGACAAGGAT
GCACTAGGAACAATGTCTCTAATTCACCAGGCACATGCTGCTGATAGGCAGAAAGGACTGGGGGTTGAGGCTGAG
GATATTGCCGACTGTCTTCTATTCCTGATCTCTAGTCAGAGCAAGAGAATTAACGGGGCAATCATTCCCATCGAC
AACGCCTGGTCTGTGATCTAA
Transcript >Pro_DTO377G3_2|g4460.t1
ATGTCGCTGCTTCAAGACATTGTTGTGATAATCACCGGTAGCGCCTCTGGAATTGGACTGGCAACAGCCACAGCA
GCTCTAAGCCAAGGGGCGAGAATTCTAGGTGTTGATGTCTCATCAGCACCTGTCTCACTCAATGAACATCCAAAT
TACAAATTCATGCAAGGTGATCTCACCCATGAGACGACACCAAGGCAGGTGGTAGAGACCTGTATCAAAGAGTTT
GGTGGACGAATCGATGGTCTGCTCAACATTGCTGGTATCATGGACCAGAATTCCAGCGTTGATAGTCTCTCAGAT
TATATGTGGGAACGATGCATTGCAGTCAATTTGACAGCTCCAGTGAAGCTCATGCGTGAGGTTATTCCTATTATG
CGACAGCAACAGAGTGGTAGTATTGTCAACGTCGGCAGCAAGGCAGCTACGAGTGGTGCTTCGTCCGGCGTTGCT
TACACAGCTAGTAAACATGGGCTGATGGGCGCAACCAAAAATGTTGCATGGAGGTACAAACAAGAGGGAATTCGC
TGCAATGCCGTTTGTCCCGGGGGAGTTCCAACCGGTATAGTACAGGCCTCTGACCCAAGCACTTGGGACAAGGAT
GCACTAGGAACAATGTCTCTAATTCACCAGGCACATGCTGCTGATAGGCAGAAAGGACTGGGGGTTGAGGCTGAG
GATATTGCCGACTGTCTTCTATTCCTGATCTCTAGTCAGAGCAAGAGAATTAACGGGGCAATCATTCCCATCGAC
AACGCCTGGTCTGTGATCTAA
Gene >Pro_DTO377G3_2|g4460.t1
ATGTCGCTGCTTCAAGACATTGTAATGCCCCAGCTGCTAACATCTCTCATCGTCCAAATTTCTTACTAATTGCGT
TCTAGGTTGTGATAATCACCGGTAGCGCCTCTGGAATTGGACTGGCAACAGCCACAGCAGCTCTAAGCCAAGGGG
CGAGAATTCTAGGTGTTGATGTCTCATCAGCACCTGTCTCACTCAATGAACATCCAAATTACAAATTCATGCAAG
GTGATCTCACCCATGAGACGACACCAAGGCAGGTGGTAGAGACCTGTATCAAAGAGTTTGGTGGACGAATCGATG
GTCTGCTCAACATTGCTGGTATCATGGACCAGAATTCCAGCGTTGATAGTCTCTCAGATTATATGTGGGAACGAT
GCATTGCAGTCAATTTGACAGCTCCAGTGAAGCTCATGCGTGAGGTTATTCCTATTATGCGACAGCAACAGAGTG
GTAGTATTGTCAACGTCGGCAGCAAGGCAGCTACGAGTGGTGCTTCGTCCGGCGTTGCTTACACAGCTAGTGAGT
ATATCCATATGAATCGAGGTATGCATCAGCATAGTGACAGACCTACTTTCCAGGTAAACATGGGCTGATGGGCGC
AACCAAAAATGTTGCATGGAGGTACAAACAAGAGGGAATTCGCTGCAATGCCGTTTGTCCCGGGGGTACGTGGAC
CAACATATGCTATTAAGATCAAATTTGTGTTAGAAGCTTATGATTTACACTAGGAGTTCCAACCGGTATAGTACA
GGCCTCTGACCCAAGCACTTGGGACAAGGATGCACTAGGAACAATGTCTCTAATTCACCAGGCACATGCTGCTGA
TAGGCAGAAAGGACTGGGGGTTGAGGCTGAGGATATTGCCGACTGTCTTCTATTCCTGATCTCTAGTCAGAGCAA
GAGAATTAACGGGGCAATCATTCCCATCGACAACGCCTGGTCTGTGATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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