Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4451.t1
Gene name
Locationscaffold_09:284419..285671
Strand+
Gene length (bp)1252
Transcript length (bp)1092
Coding sequence length (bp)1092
Protein length (aa) 364

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02900 LigB Catalytic LigB subunit of aromatic ring-opening dioxygenase 2.3E-35 91 339

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0006725 cellular aromatic compound metabolic process Yes
GO:0008198 ferrous iron binding Yes
GO:0046914 transition metal ion binding No
GO:0008150 biological_process No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:0046872 metal ion binding No
GO:0005506 iron ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 23 45 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4451.t1
MSSESRHNDSETRTPHSFSGHKIALVTLLTVLTAVLIALFWEDTANLFGFRRLLGSCARSAAVPLSASTSIAAAA
TVKGNSDVKSSMKTPIYFLSHGGPNVMYETDHPAYRKLGEIGREITTKVKPKAVVVFSAHWQAGRNTIQVNTAEK
TDLIYDFYGFPGHYYKEKYPNVGSKELANEVLRLLKEADIPAEGVERGLDHGIWASFKCAFEPETNPLNVPIVQV
SLFNTEDPDQHYRLGQAVASLREQNILIIVSGMAVHNLRDMRFAFGSSTPMPYAVSFDEALKDAVTTAPAERQKA
MAELLKRPDARQAHPSFEHLLPIHIGAGAAAEDLGKRIWTFPEGSMSWAQYRFGEVGNVSSAL*
Coding >Pro_DTO377G3_2|g4451.t1
ATGTCTTCCGAAAGCCGACATAACGACTCGGAAACACGAACACCCCATTCATTCAGCGGACACAAAATCGCTCTT
GTCACTCTTTTGACCGTTCTCACGGCTGTACTTATTGCTCTATTCTGGGAAGACACCGCCAATCTGTTCGGCTTC
CGACGCCTCCTTGGATCCTGCGCGCGCTCAGCGGCAGTACCTCTATCTGCTTCAACTTCCATTGCAGCAGCTGCG
ACAGTGAAGGGAAACTCAGACGTAAAATCCAGCATGAAAACACCTATTTACTTCCTCAGCCATGGCGGGCCAAAC
GTCATGTACGAGACCGATCACCCGGCTTACCGTAAGCTCGGGGAGATTGGGCGCGAGATAACAACCAAGGTGAAG
CCGAAGGCTGTCGTGGTATTCTCGGCGCATTGGCAGGCCGGTCGAAATACGATCCAGGTGAATACCGCCGAGAAG
ACTGATTTGATCTATGACTTCTATGGCTTCCCAGGTCATTACTATAAAGAGAAGTACCCAAATGTGGGTAGCAAG
GAATTAGCAAATGAAGTCCTGAGATTGTTGAAAGAAGCCGATATCCCGGCCGAGGGCGTTGAGCGCGGACTCGAC
CACGGCATCTGGGCTAGCTTCAAGTGCGCCTTCGAGCCAGAAACAAACCCACTGAACGTTCCCATCGTGCAAGTC
TCGCTCTTCAACACAGAAGACCCAGACCAGCACTACCGACTCGGACAGGCAGTCGCGAGTCTTCGCGAGCAGAAT
ATCCTGATCATCGTGTCCGGGATGGCCGTGCATAACCTGCGCGATATGCGGTTTGCCTTTGGCAGTTCGACCCCG
ATGCCGTATGCGGTTAGCTTCGACGAGGCGCTTAAGGATGCCGTGACGACTGCGCCTGCTGAACGGCAGAAGGCC
ATGGCTGAGCTATTAAAGAGACCAGACGCACGCCAGGCTCATCCTTCCTTCGAGCATTTGCTGCCTATTCATATT
GGGGCTGGTGCTGCGGCCGAGGACCTGGGGAAGAGGATCTGGACGTTCCCCGAGGGGAGTATGAGCTGGGCGCAG
TATCGGTTTGGTGAGGTTGGCAATGTTAGTAGCGCGTTGTAA
Transcript >Pro_DTO377G3_2|g4451.t1
ATGTCTTCCGAAAGCCGACATAACGACTCGGAAACACGAACACCCCATTCATTCAGCGGACACAAAATCGCTCTT
GTCACTCTTTTGACCGTTCTCACGGCTGTACTTATTGCTCTATTCTGGGAAGACACCGCCAATCTGTTCGGCTTC
CGACGCCTCCTTGGATCCTGCGCGCGCTCAGCGGCAGTACCTCTATCTGCTTCAACTTCCATTGCAGCAGCTGCG
ACAGTGAAGGGAAACTCAGACGTAAAATCCAGCATGAAAACACCTATTTACTTCCTCAGCCATGGCGGGCCAAAC
GTCATGTACGAGACCGATCACCCGGCTTACCGTAAGCTCGGGGAGATTGGGCGCGAGATAACAACCAAGGTGAAG
CCGAAGGCTGTCGTGGTATTCTCGGCGCATTGGCAGGCCGGTCGAAATACGATCCAGGTGAATACCGCCGAGAAG
ACTGATTTGATCTATGACTTCTATGGCTTCCCAGGTCATTACTATAAAGAGAAGTACCCAAATGTGGGTAGCAAG
GAATTAGCAAATGAAGTCCTGAGATTGTTGAAAGAAGCCGATATCCCGGCCGAGGGCGTTGAGCGCGGACTCGAC
CACGGCATCTGGGCTAGCTTCAAGTGCGCCTTCGAGCCAGAAACAAACCCACTGAACGTTCCCATCGTGCAAGTC
TCGCTCTTCAACACAGAAGACCCAGACCAGCACTACCGACTCGGACAGGCAGTCGCGAGTCTTCGCGAGCAGAAT
ATCCTGATCATCGTGTCCGGGATGGCCGTGCATAACCTGCGCGATATGCGGTTTGCCTTTGGCAGTTCGACCCCG
ATGCCGTATGCGGTTAGCTTCGACGAGGCGCTTAAGGATGCCGTGACGACTGCGCCTGCTGAACGGCAGAAGGCC
ATGGCTGAGCTATTAAAGAGACCAGACGCACGCCAGGCTCATCCTTCCTTCGAGCATTTGCTGCCTATTCATATT
GGGGCTGGTGCTGCGGCCGAGGACCTGGGGAAGAGGATCTGGACGTTCCCCGAGGGGAGTATGAGCTGGGCGCAG
TATCGGTTTGGTGAGGTTGGCAATGTTAGTAGCGCGTTGTAA
Gene >Pro_DTO377G3_2|g4451.t1
ATGTCTTCCGAAAGCCGACATAACGACTCGGAAACACGAACACCCCATTCATTCAGCGGACACAAAATCGCTCTT
GTCACTCTTTTGACCGTTCTCACGGCTGTACTTATTGCTCTATTCTGGGAAGACACCGCCAATCTGTTCGGCTTC
CGACGCCTCCTTGGATCCTGCGCGCGCTCAGCGGCAGTACCTCTATCTGCTTCAACTTCCATTGCAGCAGCTGCG
ACAGTGAAGGGAAACTCAGACGTAAAATCCAGCATGAAAACACCTATTTACTTCCTCAGCCATGGCGGGGTAAGT
TATCTATATCCTGGTTCTTATCATGGACTAAAAGCTGATTTAATACCCACAGCCAAACGTCATGTACGAGACCGA
TCACCCGGCTTACCGTAAGCTCGGGGAGATTGGGCGCGAGATAACAACCAAGGTGAAGCCGAAGGCTGTCGTGGT
ATTCTCGGCGCATTGGCAGGCCGGTCGAAATACGATCCAGGTGAATACCGCCGAGAAGACTGATTTGATCTATGA
GTATGTTTGATATCGAAATCATGGAAATTCCGAACTAACTGGATTTAGCTTCTATGGCTTCCCAGGTCATTACTA
TAAAGAGAAGTACCCAAATGTGGGTAGCAAGGAATTAGCAAATGAAGTCCTGAGATTGTTGAAAGAAGCCGATAT
CCCGGCCGAGGGCGTTGAGCGCGGACTCGACCACGGCATCTGGGCTAGCTTCAAGTGCGGTATGTGACAATTTGC
ATCAAAACGGAAACTAGACGCTGACGAGGACACTGCAGCCTTCGAGCCAGAAACAAACCCACTGAACGTTCCCAT
CGTGCAAGTCTCGCTCTTCAACACAGAAGACCCAGACCAGCACTACCGACTCGGACAGGCAGTCGCGAGTCTTCG
CGAGCAGAATATCCTGATCATCGTGTCCGGGATGGCCGTGCATAACCTGCGCGATATGCGGTTTGCCTTTGGCAG
TTCGACCCCGATGCCGTATGCGGTTAGCTTCGACGAGGCGCTTAAGGATGCCGTGACGACTGCGCCTGCTGAACG
GCAGAAGGCCATGGCTGAGCTATTAAAGAGACCAGACGCACGCCAGGCTCATCCTTCCTTCGAGCATTTGCTGCC
TATTCATATTGGGGCTGGTGCTGCGGCCGAGGACCTGGGGAAGAGGATCTGGACGTTCCCCGAGGGGAGTATGAG
CTGGGCGCAGTATCGGTTTGGTGAGGTTGGCAATGTTAGTAGCGCGTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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