Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4431.t1
Gene name
Locationscaffold_09:235743..236332
Strand+
Gene length (bp)589
Transcript length (bp)360
Coding sequence length (bp)360
Protein length (aa) 120

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00957 Synaptobrevin Synaptobrevin 1.0E-32 28 114

GO

GO Term Description Terminal node
GO:0016192 vesicle-mediated transport Yes
GO:0016021 integral component of membrane Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0006810 transport No
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 67 0.45

Transmembrane Domains

Domain # Start End Length
1 94 116 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4431.t1
MAASEQPYDPYIPSGSAGAPAATGQNGNQRTAALQAQIDDTVGVMRENINKVSQRGENLDSLQDKTDNLAVSAQG
FRRGANRVRKDMWWKDMKMRVCLVICVIVLLIVIIVPSVVATKH*
Coding >Pro_DTO377G3_2|g4431.t1
ATGGCTGCCTCCGAACAACCTTACGACCCCTATATCCCATCTGGCTCCGCTGGAGCCCCCGCTGCCACCGGGCAG
AATGGCAACCAGCGAACCGCCGCTTTGCAAGCACAAATCGATGATACTGTTGGTGTGATGCGCGAAAACATCAAC
AAGGTTTCCCAACGTGGTGAGAACTTGGATTCTCTCCAGGACAAGACCGACAACCTCGCCGTCTCGGCCCAGGGC
TTCCGCCGAGGTGCCAATCGCGTTCGCAAAGACATGTGGTGGAAGGACATGAAGATGCGCGTGTGTCTAGTCATC
TGTGTGATCGTTCTCCTGATTGTCATTATTGTGCCGTCCGTGGTTGCCACTAAGCACTAA
Transcript >Pro_DTO377G3_2|g4431.t1
ATGGCTGCCTCCGAACAACCTTACGACCCCTATATCCCATCTGGCTCCGCTGGAGCCCCCGCTGCCACCGGGCAG
AATGGCAACCAGCGAACCGCCGCTTTGCAAGCACAAATCGATGATACTGTTGGTGTGATGCGCGAAAACATCAAC
AAGGTTTCCCAACGTGGTGAGAACTTGGATTCTCTCCAGGACAAGACCGACAACCTCGCCGTCTCGGCCCAGGGC
TTCCGCCGAGGTGCCAATCGCGTTCGCAAAGACATGTGGTGGAAGGACATGAAGATGCGCGTGTGTCTAGTCATC
TGTGTGATCGTTCTCCTGATTGTCATTATTGTGCCGTCCGTGGTTGCCACTAAGCACTAA
Gene >Pro_DTO377G3_2|g4431.t1
ATGGCTGCCTCCGAACAACCTTACGACCCCTATATCCCATCTGGCTCCGCTGGAGCCCCCGCTGCCACCGGGCAG
AATGGCAACCAGCGAACCGCCGCTTTGCAAGCAGTAAGTCAATCCTCGACAATCTCTTGACTCCTAGCGACCTCA
GCCAGTGAGCAAACAGACAAATATGGTCTGGTGGATAGCGAATGCTTGCTTTCTTGTTGAGCTATCAAAATGCGA
AGGCTGGGGCGGTTGATTTTCGCAATGGGGCTGACATGGTATCATCTATAGCAAATCGATGATACTGTTGGTGTG
ATGCGCGAAAACATCAACAAGGTTTCCCAACGTGGTGAGAACTTGGATTCTCTCCAGGACAAGACCGACAACCTC
GCCGTCTCGGCCCAGGGCTTCCGCCGAGGTGCCAATCGCGTTCGCAAAGACATGTGGTGGAAGGACATGAAGATG
CGCGTGTGTCTAGTCATCTGTGTGATCGTTCTCCTGATTGTCATTATTGTGCCGTCCGGTAAGCGCTCCTTGGCA
TTCCCCTACCTGACTCTCCAGCGCGACACTAACACCGTCCACAGTGGTTGCCACTAAGCACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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