Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g4410.t1
Gene name
Location	scaffold_09:191271..192040
Strand	-
Gene length (bp)	769
Transcript length (bp)	663
Coding sequence length (bp)	663
Protein length (aa)	221

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04117	Mpv17_PMP22	Mpv17 / PMP22 family	8.2E-12	155	215

GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No
GO:0031224	intrinsic component of membrane	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	24	19
2	37	59	22
3	134	156	22
4	200	219	19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g4410.t1 MPSPLLVTFVQATILNAISNVLAQLIDQRNNKTPFTLNTLALLQFLAYGILIVAPNFYWQRALESRYPGFPTRAE LSNAFSARSLKSLFSPRSWLSVFSRFRRDVSLPSHKDKEKHVQWVPAPTSGLHSFVMKFLFDQTAASIVNLVLFV VIINLLKGESLAKSWDLVVLDFRPLMSARLKYRPVVSVLMYTIIPVDRRVVFGSACGVIWGIYLSLYAGV*
Coding	>Pro_DTO377G3_2\|g4410.t1 ATGCCCTCACCTTTGCTTGTGACGTTCGTGCAGGCAACCATTTTGAATGCTATCTCCAATGTCCTCGCGCAGCTG ATTGACCAGCGCAACAACAAAACTCCATTTACTCTAAATACACTGGCCCTCCTCCAATTTCTGGCCTATGGCATC TTAATCGTGGCCCCCAATTTCTACTGGCAACGCGCCCTGGAGTCGCGCTATCCAGGGTTTCCTACGCGTGCTGAA CTCTCAAATGCATTCAGTGCTCGATCGCTGAAATCTCTGTTCTCACCCCGCTCATGGCTTTCTGTCTTTTCAAGA TTCCGCCGGGATGTTTCGCTCCCTAGCCACAAAGACAAAGAAAAGCATGTCCAATGGGTGCCAGCGCCGACATCT GGGCTGCATAGCTTCGTCATGAAATTTTTGTTTGATCAGACGGCTGCCTCAATTGTAAATCTTGTGCTATTTGTG GTTATCATCAATCTGCTGAAGGGAGAGAGTTTGGCAAAATCGTGGGATTTGGTTGTTTTGGATTTTCGACCTCTT ATGAGTGCCCGTCTGAAGTATCGGCCTGTTGTTTCGGTCTTAATGTACACAATCATTCCTGTAGATCGACGAGTG GTCTTTGGAAGTGCGTGTGGGGTGATCTGGGGGATTTATTTGAGTTTATATGCTGGAGTTTAG
Transcript	>Pro_DTO377G3_2\|g4410.t1 ATGCCCTCACCTTTGCTTGTGACGTTCGTGCAGGCAACCATTTTGAATGCTATCTCCAATGTCCTCGCGCAGCTG ATTGACCAGCGCAACAACAAAACTCCATTTACTCTAAATACACTGGCCCTCCTCCAATTTCTGGCCTATGGCATC TTAATCGTGGCCCCCAATTTCTACTGGCAACGCGCCCTGGAGTCGCGCTATCCAGGGTTTCCTACGCGTGCTGAA CTCTCAAATGCATTCAGTGCTCGATCGCTGAAATCTCTGTTCTCACCCCGCTCATGGCTTTCTGTCTTTTCAAGA TTCCGCCGGGATGTTTCGCTCCCTAGCCACAAAGACAAAGAAAAGCATGTCCAATGGGTGCCAGCGCCGACATCT GGGCTGCATAGCTTCGTCATGAAATTTTTGTTTGATCAGACGGCTGCCTCAATTGTAAATCTTGTGCTATTTGTG GTTATCATCAATCTGCTGAAGGGAGAGAGTTTGGCAAAATCGTGGGATTTGGTTGTTTTGGATTTTCGACCTCTT ATGAGTGCCCGTCTGAAGTATCGGCCTGTTGTTTCGGTCTTAATGTACACAATCATTCCTGTAGATCGACGAGTG GTCTTTGGAAGTGCGTGTGGGGTGATCTGGGGGATTTATTTGAGTTTATATGCTGGAGTTTAG
Gene	>Pro_DTO377G3_2\|g4410.t1 ATGCCCTCACCTTTGCTTGTGACGTTCGTGCAGGCAACCATTTTGAATGCTATCTCCAATGTCCTCGCGCAGCTG ATTGACCAGCGCAACAACAAAGTAAGAAAAATTCCTGTTTTCTATGCTCATGACAACATTGACAAAGTCCTAGAC TCCATTTACTCTAAATACACTGGCCCTCCTCCAATTTCTGGCCTATGGCATCTTAATCGTGGCCCCCAATTTCTA CTGGCAACGCGCCCTGGAGTCGCGCTATCCAGGGTTTCCTACGCGTGCTGAACTCTCAAATGCATTCAGTGCTCG ATCGCTGAAATCTCTGTTCTCACCCCGCTCATGGCTTTCTGTCTTTTCAAGATTCCGCCGGGATGTTTCGCTCCC TAGCCACAAAGACAAAGAAAAGCATGTCCAATGGGTGCCAGCGCCGACATCTGGGCTGCATAGCTTCGTCATGAA ATTTTTGTTTGATCAGACGGCTGCCTCAATTGTAAATCTTGTGCTATTTGTGGTTATCATCAATCTGCTGAAGGG AGAGAGTTTGGCAAAATCGTGGGATTTGGTTGTTTTGGTAAGTTGCCCTTCTGTTGAACAATGCTGATTACACAG ATGCTGACTTCTGTAGGATTTTCGACCTCTTATGAGTGCCCGTCTGAAGTATCGGCCTGTTGTTTCGGTCTTAAT GTACACAATCATTCCTGTAGATCGACGAGTGGTCTTTGGAAGTGCGTGTGGGGTGATCTGGGGGATTTATTTGAG TTTATATGCTGGAGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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