© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4404.t1 |
| Gene name | |
| Location | scaffold_09:175594..177721 |
| Strand | + |
| Gene length (bp) | 2127 |
| Transcript length (bp) | 1743 |
| Coding sequence length (bp) | 1743 |
| Protein length (aa) | 581 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 7.3E-38 | 82 | 577 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.7E-15 | 72 | 465 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.7E-11 | 93 | 228 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 59 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 57 | 79 | 22 |
| 2 | 94 | 116 | 22 |
| 3 | 123 | 145 | 22 |
| 4 | 149 | 171 | 22 |
| 5 | 183 | 205 | 22 |
| 6 | 210 | 232 | 22 |
| 7 | 253 | 275 | 22 |
| 8 | 279 | 301 | 22 |
| 9 | 321 | 343 | 22 |
| 10 | 358 | 380 | 22 |
| 11 | 419 | 441 | 22 |
| 12 | 446 | 468 | 22 |
| 13 | 546 | 568 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 4.83 | 1.68 | 7.99 |
| 5d_25C | Five days - 25 degrees Celsius | 2.33 | 0.58 | 4.08 |
| 7d_25C | Seven days - 25 degrees Celsius | 2.49 | 0.56 | 4.41 |
| 10d_25C | Ten days - 25 degrees Celsius | 2.43 | 0.62 | 4.24 |
| 7d_15C | Seven days - 15 degrees Celsius | 4.27 | 1.38 | 7.16 |
| 7d_30C | Seven days - 30 degrees Celsius | 4.93 | 1.63 | 8.22 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.049575 | yes |
| 3d_25C | 7d_25C | 0.106471 | no |
| 3d_25C | 7d_15C | 0.809572 | no |
| 3d_25C | 7d_30C | 0.973975 | no |
| 3d_25C | 10d_25C | 0.073459 | no |
| 5d_25C | 7d_25C | 0.921307 | no |
| 5d_25C | 7d_15C | 0.133060 | no |
| 5d_25C | 7d_30C | 0.046552 | yes |
| 5d_25C | 10d_25C | 0.948586 | no |
| 7d_25C | 7d_15C | 0.212206 | no |
| 7d_25C | 7d_30C | 0.093559 | no |
| 7d_25C | 10d_25C | 0.973812 | no |
| 7d_15C | 7d_30C | 0.786845 | no |
| 7d_15C | 10d_25C | 0.174239 | no |
| 7d_30C | 10d_25C | 0.073301 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4404.t1 MADSIIHSSRPADEKAVMQHDEYSDTSQHSHRVMAGPGSEEAMHESEKDIPMTFRRFMGFAAMAFLWTGSQIPVY LFGGIPPYIYGDIGGADRWVWFVLANLLGLAGVCPFVGSLSDLSGRRPVAIIGASLIVIGMIICSTVHTMNNFIA GMAIAGAGAGINELTALAATSEMAPTRKRGVYVSILIFTIVPFCPSVLWAQLIAYYSHWRYVGAFCAAWSAFGLL ITVLFYFPPPRVNSAGLSRKEIIGRIDFVGGLLSITGLIVFLAGLQWGGYMYPWTSAHVLAPLIVGFLLLVAFAF WEIYGAKYPIFPSRLKQEPRILGLTLVITFISGANFFSVLMFWPTESFNVYGHDPVEVGVRSLPIGFGIMTGACT VLALLSILRGHNKELLIVSSVMMTAGCGAMSIGRTDNMYQLWGILVLAGLGIGGIVVPASIITTIICPDDLIATI SALTLSIRVVGGGIGYTIYYNVFISKFVPAATHYIGGVMMKELNITDVKLIGEAIELTGASLLSELRTIPGIAGN ETAYQMVVGAGQLAYAEGYKWVYYVSIAFGGVSIVAACFLGDIQKYMTDHVAVVM* |
| Coding | >Pro_DTO377G3_2|g4404.t1 ATGGCGGACTCAATCATTCACTCGAGTCGGCCAGCCGACGAGAAGGCTGTGATGCAACATGACGAATATAGTGAC ACCTCACAGCATAGTCACCGGGTAATGGCTGGGCCGGGCTCAGAGGAAGCTATGCATGAGTCTGAGAAGGATATC CCGATGACATTCCGTCGGTTCATGGGTTTCGCTGCCATGGCTTTCCTGTGGACCGGAAGCCAGATTCCAGTCTAC CTCTTTGGCGGCATCCCTCCCTATATTTATGGAGACATTGGTGGAGCAGATCGATGGGTCTGGTTTGTTCTTGCA AACTTGCTCGGCCTCGCCGGTGTATGCCCCTTCGTTGGATCTCTATCAGATCTAAGTGGACGCCGCCCAGTCGCT ATTATTGGAGCATCCCTCATAGTTATTGGAATGATAATCTGCAGCACGGTGCACACAATGAACAACTTCATCGCG GGCATGGCCATCGCTGGTGCCGGTGCTGGGATCAATGAACTGACAGCCCTGGCTGCAACCTCCGAGATGGCGCCC ACTCGAAAGAGAGGAGTCTATGTGTCGATCCTTATCTTCACCATCGTACCATTCTGCCCGTCCGTGCTATGGGCT CAGCTTATTGCATATTACAGCCATTGGCGCTATGTCGGTGCGTTCTGTGCTGCGTGGAGTGCCTTTGGTCTGCTG ATCACGGTTCTATTCTACTTCCCTCCGCCACGAGTCAATTCAGCTGGTTTGAGCCGGAAGGAGATAATTGGACGG ATCGACTTTGTCGGTGGATTGCTCAGCATCACTGGTCTCATTGTCTTCTTGGCTGGGTTGCAATGGGGTGGATAT ATGTATCCATGGACATCCGCCCATGTCCTGGCACCATTGATCGTTGGGTTCCTTCTGCTTGTTGCTTTTGCTTTC TGGGAAATCTATGGAGCCAAATACCCCATTTTTCCATCTCGCCTCAAGCAAGAGCCTCGGATTCTAGGCCTTACC CTCGTCATTACTTTCATCTCCGGTGCCAACTTCTTCTCCGTCCTTATGTTCTGGCCCACGGAATCATTCAATGTC TATGGCCATGACCCCGTGGAAGTGGGTGTTCGCAGTCTCCCTATTGGATTTGGCATCATGACAGGGGCATGTACT GTGCTTGCGCTTCTTAGTATACTTCGTGGGCATAACAAGGAACTCTTGATCGTTAGCAGCGTGATGATGACTGCA GGATGCGGTGCTATGTCTATCGGCCGCACTGATAATATGTATCAGCTTTGGGGAATTCTCGTCCTTGCCGGCCTT GGAATTGGAGGTATTGTGGTGCCAGCCTCGATTATTACCACAATCATTTGCCCGGACGATCTGATTGCCACTATC TCTGCGCTCACCCTCTCTATTCGCGTGGTAGGCGGTGGCATCGGCTACACCATTTACTACAATGTCTTCATCTCC AAGTTTGTCCCCGCGGCAACACACTACATCGGTGGTGTGATGATGAAAGAGCTCAACATCACCGACGTTAAGCTG ATTGGCGAAGCAATTGAGCTGACAGGTGCCTCATTGCTAAGCGAGCTACGCACAATCCCTGGTATTGCTGGCAAT GAGACTGCTTATCAAATGGTCGTAGGGGCTGGTCAGCTTGCATATGCCGAAGGATATAAATGGGTATACTATGTC AGTATTGCATTCGGGGGTGTCTCCATTGTGGCCGCCTGTTTCTTGGGCGACATCCAGAAGTATATGACAGACCAC GTTGCCGTGGTAATGTGA |
| Transcript | >Pro_DTO377G3_2|g4404.t1 ATGGCGGACTCAATCATTCACTCGAGTCGGCCAGCCGACGAGAAGGCTGTGATGCAACATGACGAATATAGTGAC ACCTCACAGCATAGTCACCGGGTAATGGCTGGGCCGGGCTCAGAGGAAGCTATGCATGAGTCTGAGAAGGATATC CCGATGACATTCCGTCGGTTCATGGGTTTCGCTGCCATGGCTTTCCTGTGGACCGGAAGCCAGATTCCAGTCTAC CTCTTTGGCGGCATCCCTCCCTATATTTATGGAGACATTGGTGGAGCAGATCGATGGGTCTGGTTTGTTCTTGCA AACTTGCTCGGCCTCGCCGGTGTATGCCCCTTCGTTGGATCTCTATCAGATCTAAGTGGACGCCGCCCAGTCGCT ATTATTGGAGCATCCCTCATAGTTATTGGAATGATAATCTGCAGCACGGTGCACACAATGAACAACTTCATCGCG GGCATGGCCATCGCTGGTGCCGGTGCTGGGATCAATGAACTGACAGCCCTGGCTGCAACCTCCGAGATGGCGCCC ACTCGAAAGAGAGGAGTCTATGTGTCGATCCTTATCTTCACCATCGTACCATTCTGCCCGTCCGTGCTATGGGCT CAGCTTATTGCATATTACAGCCATTGGCGCTATGTCGGTGCGTTCTGTGCTGCGTGGAGTGCCTTTGGTCTGCTG ATCACGGTTCTATTCTACTTCCCTCCGCCACGAGTCAATTCAGCTGGTTTGAGCCGGAAGGAGATAATTGGACGG ATCGACTTTGTCGGTGGATTGCTCAGCATCACTGGTCTCATTGTCTTCTTGGCTGGGTTGCAATGGGGTGGATAT ATGTATCCATGGACATCCGCCCATGTCCTGGCACCATTGATCGTTGGGTTCCTTCTGCTTGTTGCTTTTGCTTTC TGGGAAATCTATGGAGCCAAATACCCCATTTTTCCATCTCGCCTCAAGCAAGAGCCTCGGATTCTAGGCCTTACC CTCGTCATTACTTTCATCTCCGGTGCCAACTTCTTCTCCGTCCTTATGTTCTGGCCCACGGAATCATTCAATGTC TATGGCCATGACCCCGTGGAAGTGGGTGTTCGCAGTCTCCCTATTGGATTTGGCATCATGACAGGGGCATGTACT GTGCTTGCGCTTCTTAGTATACTTCGTGGGCATAACAAGGAACTCTTGATCGTTAGCAGCGTGATGATGACTGCA GGATGCGGTGCTATGTCTATCGGCCGCACTGATAATATGTATCAGCTTTGGGGAATTCTCGTCCTTGCCGGCCTT GGAATTGGAGGTATTGTGGTGCCAGCCTCGATTATTACCACAATCATTTGCCCGGACGATCTGATTGCCACTATC TCTGCGCTCACCCTCTCTATTCGCGTGGTAGGCGGTGGCATCGGCTACACCATTTACTACAATGTCTTCATCTCC AAGTTTGTCCCCGCGGCAACACACTACATCGGTGGTGTGATGATGAAAGAGCTCAACATCACCGACGTTAAGCTG ATTGGCGAAGCAATTGAGCTGACAGGTGCCTCATTGCTAAGCGAGCTACGCACAATCCCTGGTATTGCTGGCAAT GAGACTGCTTATCAAATGGTCGTAGGGGCTGGTCAGCTTGCATATGCCGAAGGATATAAATGGGTATACTATGTC AGTATTGCATTCGGGGGTGTCTCCATTGTGGCCGCCTGTTTCTTGGGCGACATCCAGAAGTATATGACAGACCAC GTTGCCGTGGTAATGTGA |
| Gene | >Pro_DTO377G3_2|g4404.t1 ATGGCGGACTCAATCATTCACTCGAGTCGGCCAGCCGACGAGAAGGCTGTGATGCAACATGACGAATATAGTGAC ACCTCACAGCATAGTCACCGGGTAATGGCTGGGCCGGGCTCAGAGGAAGCTATGCATGAGTCTGAGAAGGATATC CCGGTAGGGCTCGGCTGCTTAACCTGTGGTTGGCGACAATACTGATCGTCAAAAGATGACATTCCGTCGGTTCAT GGGTTTCGCTGCCATGGCTTTCCTGTGGACCGGAAGCCAGATTCCAGTCTACCTCTTTGGTATGTGAGAAACAAC ATGAAAGCTGTGATATAATTTTGATGCATTTCCACTAGGCGGCATCCCTCCCTATATTTATGGAGACATTGGTGG AGCAGATCGATGGGTCTGGTTTGTGAGTGCATACCCATTGAAGTATAGAGCTATGATTGACGAGCTTCTGTTAGG TTCTTGCAAACTTGCTCGGCCTCGCCGGTGTATGCCCCTTCGTTGGATCTCTATCAGATCTAAGTGGACGCCGCC CAGTCGCTATTATTGGAGCATCCCTCATAGTTATTGGAATGATAATCTGCAGCACGGTGCACACAATGAACAACT TCATCGGTTTGTATCTGCCCATATGTCGCAGTACATAGACGTTCTCTAACATGGATACAGCGGGCATGGCCATCG CTGGTGCCGGTGCTGGGATCAATGAACTGACAGCCCTGGCTGCAACCTCCGAGATGGCGCCCACTCGAAAGAGAG GAGTCTATGTGTCGATCCTTATCTTCACCATCGTACCATTCTGCCCGTCCGTGCTATGGGCTCAGCTTATTGCAT ATTACAGCCATTGGCGCTATGTCGGTGCGTTCTGTGCTGCGTGGAGTGCCTTTGGTCTGCTGATCACGGTTCTAT TCTACTTCCCTCCGCCACGAGTCAATTCAGCTGGTTTGAGCCGGAAGGAGATAATTGGACGGATCGACTTTGTCG GTGGATTGCTCAGCATCACTGGTCTCATTGTCTTCTTGGCTGGGTTGCAATGGGGTGGATATATGGTATGCTTGG AGATACCCTGTGCAGGGCTACATATCTTACTGACATATTAATTTAGTATCCATGGACATCCGCCCATGTCCTGGC ACCATTGATCGTTGGGTTCCTTCTGCTTGTTGCTTTTGCTTTCTGGGAAATCTATGGAGCCAAATACCCCATTTT TCCATCTCGCCTCAAGCAAGAGCCTCGGATTCTAGGCCTTACCCTCGTCATTACTTTCATCTCCGGTGCCAACTT CTTCTCCGTCCTTATGTTCTGGCCCACGGAATCATTCAATGTCTATGGCCATGACCCCGTGGAAGTGGGTGTTCG CAGTCTCCCTATTGGATTTGGCATCATGACAGGGGCATGTACTGTGCTTGCGCTTCTTAGTATACTTCGTGGGCA TAACAAGGAACTCTTGATCGTTAGCAGCGTGATGATGACTGCAGGTGAGTTTTCTTGATGGGTATAGGAGTTCCC AAAAAGCTAATCTGTTCTCCTCAAAACAGGATGCGGTGCTATGTCTATCGGCCGCACTGATAATATGTATCAGCT TTGGGGAATTCTCGTCCTTGCCGGCCTTGGAATTGGAGGTATTGTGGTGCCAGCCTCGATTATTACCACAATCAT TTGCCCGGACGTGAGTCATCTTGCTAGAAGGGAGGAAATTTGCCTATTGACATTAGCTTTCGCTAGGATCTGATT GCCACTATCTCTGCGCTCACCCTCTCTATTCGCGTGGTAGGCGGTGGCATCGGCTACACCATTTACTACAATGTC TTCATCTCCAAGTTTGTCCCCGCGGCAACACACTACATCGGTGGTGTGATGATGAAAGAGCTCAACATCACCGAC GTTAAGCTGATTGGCGAAGCAATTGAGCTGACAGGTGCCTCATTGCTAAGCGAGCTACGCACAATCCCTGGTATT GCTGGCAATGAGACTGCTTATCAAATGGTCGTAGGGGCTGGTCAGCTTGCATATGCCGAAGGATATAAATGGGTA TACTATGTCAGTATTGCATTCGGGGGTGTCTCCATTGTGGCCGCCTGTTTCTTGGGCGACATCCAGAAGTATATG ACAGACCACGTTGCCGTGGTAATGTGA |