Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4394.t1
Gene name
Locationscaffold_09:144985..145940
Strand-
Gene length (bp)955
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14748 P5CR_dimer Pyrroline-5-carboxylate reductase dimerisation 2.6E-28 189 288
PF03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent 4.3E-10 8 114

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4394.t1
MDIQQGTLCILGCGNLGIAILDGLVNAPTEKSKDLPFARYTACVRSANSEKRLSERFAESLDKISISRGNNVQAV
QTADVIILGADPADIEAILVQPGLREALTDKLIISIAAGWTRQKLEITIYGSPTTNDNTAGRAWVVRTLPNIAAQ
VSQSLTAIETSEPALPERYLQITTTIFEQIGKAVHVDPRLMNATTAVGGSTPAFFAVICDSMIDAAVAVGMPRDL
AHTMIFQSMQGTATMLQSGIHPALLKDQGTSSEGCTIGGLMVMEEAGVRGHVGRALREAVTLARLMETTPHVNDT
RH*
Coding >Pro_DTO377G3_2|g4394.t1
ATGGACATTCAACAAGGAACCCTTTGCATTCTAGGCTGTGGCAACCTGGGCATTGCCATCCTAGACGGCTTGGTT
AATGCACCCACAGAGAAGTCTAAAGATTTACCATTTGCTCGATACACTGCATGCGTGCGCAGTGCAAACTCGGAG
AAAAGACTATCCGAACGATTCGCCGAGTCTTTGGACAAAATAAGCATTTCTCGCGGCAACAACGTACAGGCTGTA
CAAACTGCCGATGTTATAATTCTAGGCGCAGACCCTGCCGATATCGAGGCCATCCTGGTGCAGCCTGGGCTCCGC
GAAGCCTTGACTGACAAGCTTATCATCAGCATTGCAGCCGGCTGGACAAGACAAAAGCTCGAAATCACAATATAC
GGCAGCCCAACCACCAACGATAACACAGCTGGTAGAGCCTGGGTGGTGCGCACGTTGCCGAACATCGCAGCCCAA
GTATCTCAGTCACTTACGGCTATTGAAACATCGGAGCCTGCATTGCCGGAGCGATATCTCCAGATAACGACGACG
ATCTTCGAGCAAATTGGTAAGGCAGTACACGTTGACCCGAGGTTGATGAATGCTACTACCGCTGTCGGGGGCTCG
ACGCCAGCCTTTTTCGCTGTTATTTGCGACTCAATGATTGATGCCGCAGTGGCGGTTGGTATGCCACGGGACCTG
GCTCATACCATGATCTTTCAGTCGATGCAAGGGACGGCAACCATGCTTCAGAGTGGCATCCACCCCGCTCTGTTG
AAGGATCAAGGGACGTCCTCGGAGGGCTGCACAATTGGTGGGTTGATGGTGATGGAAGAGGCTGGTGTGCGTGGG
CATGTTGGACGGGCGCTTCGGGAAGCTGTTACTTTGGCTCGCTTGATGGAGACAACACCCCATGTTAATGATACA
AGGCATTGA
Transcript >Pro_DTO377G3_2|g4394.t1
ATGGACATTCAACAAGGAACCCTTTGCATTCTAGGCTGTGGCAACCTGGGCATTGCCATCCTAGACGGCTTGGTT
AATGCACCCACAGAGAAGTCTAAAGATTTACCATTTGCTCGATACACTGCATGCGTGCGCAGTGCAAACTCGGAG
AAAAGACTATCCGAACGATTCGCCGAGTCTTTGGACAAAATAAGCATTTCTCGCGGCAACAACGTACAGGCTGTA
CAAACTGCCGATGTTATAATTCTAGGCGCAGACCCTGCCGATATCGAGGCCATCCTGGTGCAGCCTGGGCTCCGC
GAAGCCTTGACTGACAAGCTTATCATCAGCATTGCAGCCGGCTGGACAAGACAAAAGCTCGAAATCACAATATAC
GGCAGCCCAACCACCAACGATAACACAGCTGGTAGAGCCTGGGTGGTGCGCACGTTGCCGAACATCGCAGCCCAA
GTATCTCAGTCACTTACGGCTATTGAAACATCGGAGCCTGCATTGCCGGAGCGATATCTCCAGATAACGACGACG
ATCTTCGAGCAAATTGGTAAGGCAGTACACGTTGACCCGAGGTTGATGAATGCTACTACCGCTGTCGGGGGCTCG
ACGCCAGCCTTTTTCGCTGTTATTTGCGACTCAATGATTGATGCCGCAGTGGCGGTTGGTATGCCACGGGACCTG
GCTCATACCATGATCTTTCAGTCGATGCAAGGGACGGCAACCATGCTTCAGAGTGGCATCCACCCCGCTCTGTTG
AAGGATCAAGGGACGTCCTCGGAGGGCTGCACAATTGGTGGGTTGATGGTGATGGAAGAGGCTGGTGTGCGTGGG
CATGTTGGACGGGCGCTTCGGGAAGCTGTTACTTTGGCTCGCTTGATGGAGACAACACCCCATGTTAATGATACA
AGGCATTGA
Gene >Pro_DTO377G3_2|g4394.t1
ATGGACATTCAACAAGGAACCCTTTGCATTCTAGGCTGTGGTGAGTGTGCAACCATAGGGTAAAGTACGTCGACT
AATGTGTCTAGGCAACCTGGGCATTGCCATCCTAGACGGCTTGGTTAATGCACCCACAGAGAAGTCTAAAGATTT
ACCATTTGCTCGATACACTGCATGCGTGCGCAGTGCAAACTCGGAGAAAAGACTATCCGAACGATTCGCCGAGTC
TTTGGACAAAATAAGCATTTCTCGCGGCAACAACGTACAGGCTGTACAAACTGCCGATGTTATAATTCTAGGCGC
AGACCCTGCCGATATCGAGGCCATCCTGGTGCAGCCTGGGCTCCGCGAAGCCTTGACTGACAAGCTTATCATCAG
CATTGCAGCCGGCTGGACAAGACAAAAGCTCGAAATCACAATATACGGCAGCCCAACCACCAACGATAACACAGC
TGGTAGAGCCTGGGTGGTGCGCACGTTGCCGAACATCGCAGCCCAAGTATCTCAGTCACTTACGGCTATTGAAAC
ATCGGAGCCTGCATTGCCGGAGCGATATCTCCAGATAACGACGACGATCTTCGAGCAAATTGGTAAGGCAGTACA
CGTTGACCCGAGGTTGATGAATGCTACTACCGCTGTCGGGGGCTCGACGCCAGCCTTTTTCGCTGTTATTTGCGA
CTCAATGATTGATGCCGCAGTGGCGGTTGGTATGCCACGGGACCTGGCTCATACCATGATCTTTCAGTCGATGCA
AGGGACGGCAACCATGCTTCAGAGTGGCATCCACCCCGCTCTGTTGAAGGATCAAGGGACGTCCTCGGAGGGCTG
CACAATTGGTGGGTTGATGGTGATGGAAGAGGCTGGTGTGCGTGGGCATGTTGGACGGGCGCTTCGGGAAGCTGT
TACTTTGGCTCGCTTGATGGAGACAACACCCCATGTTAATGATACAAGGCATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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