Protein ID | Pro_DTO377G3_2|g438.t1 |
Gene name | |
Location | scaffold_01:1109724..1112803 |
Strand | + |
Gene length (bp) | 3079 |
Transcript length (bp) | 2643 |
Coding sequence length (bp) | 2643 |
Protein length (aa) | 881 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04438 | zf-HIT | HIT zinc finger | 8.2E-10 | 10 | 38 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 13.36 | 7.16 | 19.55 |
5d_25C | Five days - 25 degrees Celsius | 14.77 | 8.06 | 21.48 |
7d_25C | Seven days - 25 degrees Celsius | 16.71 | 9.34 | 24.07 |
10d_25C | Ten days - 25 degrees Celsius | 15.07 | 8.27 | 21.88 |
7d_15C | Seven days - 15 degrees Celsius | 19.55 | 11.02 | 28.08 |
7d_30C | Seven days - 30 degrees Celsius | 16.48 | 9.18 | 23.77 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.763101 | no |
3d_25C | 7d_25C | 0.430768 | no |
3d_25C | 7d_15C | 0.133060 | no |
3d_25C | 7d_30C | 0.467915 | no |
3d_25C | 10d_25C | 0.713497 | no |
5d_25C | 7d_25C | 0.702843 | no |
5d_25C | 7d_15C | 0.297406 | no |
5d_25C | 7d_30C | 0.743083 | no |
5d_25C | 10d_25C | 0.961301 | no |
7d_25C | 7d_15C | 0.602549 | no |
7d_25C | 7d_30C | 0.972397 | no |
7d_25C | 10d_25C | 0.756541 | no |
7d_15C | 7d_30C | 0.561303 | no |
7d_15C | 10d_25C | 0.335328 | no |
7d_30C | 10d_25C | 0.792679 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g438.t1 MADSDPLLSDLCSICHTNPPKYRCPRCSTRTCSLPCTRRHKLWSQCSGVRDPAAYLKRQELNTPSAFDRDFNFIT SIERTLERAEREVDNRGIDLAGGAQADDDNSEGSQHPTTGRKRKHPNQGLAKGEAAFLRGAETAGVKVLRAPKGM SRNKQNGSRLHPKHKRLAWTIEWITSDGLKTIRDSVIDTCSVAEAYNRCCPRPKDQEPATKPVKEEKKDLDTHNT TIAAPGDPVTTVVEEADTKQPSSPNKDSTKEPADDSTEQTDKVPNQTITPHRGLYFYLHRPRTTTKKPVLAPLLQ SSTLNAVLRNRTVLEFPTIYALLESAETLFSDKDNSKFISEEEYLRTAGPDEIGQSSTASDDDGAAGNKVLASSS VNLQDVDENLVLEVLKKDLFEPVSETEPILLIVTSRPKEETTISAASVESKILRVHLHSTRDHLGNIKCSRIIMK TNVLSFGITVIYLGTVASALLVARPPSQLPAKKRPQGCDCYTISGPDPGYFQHYKVWDFRAVDLKKHANLNLSKP IDYDDEDWDDDAEAEGQEPQNGRLSPGVHNEKDPDPRSLLFYKTSFEKDWSSQNWERRGTPIAPVLMINSKHNVF LTRDSDQNNPHATYLVLRTTRFSEYTSTAEIETRIRNIYRCSLRVRLRLLPAGSVVSQPPQHKEWPPRDPQRHPT VPLNKTIPLRDSRPPDGACAGIFTYHDSTCESDIEILTRDPSHRVHYANQPDYDFAADHEIPNASTIADIPVPWT TWSTHRLDWLSDMSRWYVNNQIQDAKSYRVPELESMIVLNLWSDGGLWTGDMRIGDSIYMGIEYIELVYNRSSDA FRAPYVSPSQNQAPPTNGSFGNGNPLEPDRKDEKCKPGLPRQTIPGFDWLACSVL* |
Coding | >Pro_DTO377G3_2|g438.t1 ATGGCGGATTCAGATCCCTTACTGAGTGATCTCTGCTCAATATGCCATACCAATCCTCCCAAGTACCGCTGTCCA CGCTGCTCAACACGCACCTGCTCTCTACCCTGCACACGTCGCCACAAACTCTGGTCGCAATGTTCCGGCGTGCGC GATCCAGCCGCATACTTAAAGCGCCAAGAACTAAACACTCCATCTGCGTTCGATCGCGATTTTAATTTCATCACG AGTATCGAGCGCACTCTCGAGCGCGCGGAGAGAGAAGTTGATAACCGCGGGATTGATCTTGCGGGTGGTGCCCAG GCCGACGATGATAATTCCGAAGGTTCCCAACATCCGACTACTGGCCGTAAAAGGAAGCACCCGAACCAGGGCCTT GCCAAGGGTGAGGCTGCGTTCTTACGCGGTGCCGAAACTGCTGGTGTAAAAGTTCTTCGAGCTCCAAAGGGAATG TCGAGGAATAAGCAGAATGGGTCGCGTTTGCATCCCAAGCACAAGCGTCTTGCTTGGACCATAGAGTGGATTACG TCTGATGGGCTGAAGACTATTCGTGATTCTGTCATCGATACATGCTCTGTTGCTGAAGCCTATAACCGTTGTTGC CCACGTCCGAAGGATCAAGAGCCAGCTACCAAGCCAGTGAAGGAAGAGAAGAAAGATTTGGACACCCATAATACA ACTATCGCTGCACCCGGTGATCCTGTCACGACAGTGGTTGAAGAGGCAGATACAAAACAACCATCATCCCCAAAC AAAGACTCAACAAAAGAACCAGCTGATGACTCAACTGAGCAAACGGATAAAGTACCAAATCAGACCATCACCCCC CACCGCGGTCTCTACTTCTACCTTCACCGTCCGCGAACCACAACCAAAAAGCCTGTCTTAGCTCCTCTCTTGCAA TCCTCGACACTCAATGCTGTTCTGCGCAATCGGACAGTTCTAGAATTCCCTACGATTTATGCACTGCTAGAGTCA GCAGAGACATTGTTTTCAGACAAAGATAACTCTAAATTCATATCTGAAGAAGAGTATCTTCGCACTGCTGGACCA GATGAGATAGGCCAGTCTTCTACCGCGAGTGACGATGACGGTGCGGCTGGAAACAAAGTACTCGCCAGTTCTTCG GTGAATCTTCAAGATGTTGATGAGAACCTGGTACTGGAGGTATTGAAGAAAGATCTATTTGAACCAGTCTCGGAA ACTGAGCCAATCCTGCTGATCGTGACATCTCGACCAAAAGAGGAAACCACGATCAGCGCGGCTTCTGTCGAGTCA AAGATCCTTCGAGTTCACCTTCACTCCACCCGGGACCACCTTGGGAATATCAAATGCTCCAGGATCATCATGAAA ACTAACGTTTTGTCCTTCGGGATCACCGTGATTTATCTCGGCACGGTAGCATCAGCCTTATTAGTTGCCAGACCA CCGTCGCAGTTACCAGCCAAGAAACGTCCACAGGGATGCGATTGCTACACAATATCCGGGCCTGATCCGGGATAT TTTCAGCACTACAAGGTCTGGGACTTTCGGGCAGTGGATTTGAAGAAACATGCCAATCTCAATCTGTCGAAGCCC ATTGATTATGACGACGAGGACTGGGACGATGACGCTGAGGCCGAGGGCCAAGAACCGCAAAATGGCCGTCTCTCG CCCGGAGTCCATAATGAGAAAGACCCGGACCCCAGATCGCTGTTGTTCTACAAAACCTCATTCGAGAAAGACTGG AGCAGTCAAAACTGGGAACGTCGAGGCACCCCCATAGCCCCAGTCCTCATGATAAATTCAAAGCACAACGTCTTC CTCACCCGGGACTCGGACCAGAATAATCCTCACGCGACGTATCTCGTCCTGCGTACCACTCGTTTTTCAGAATAC ACCTCCACCGCGGAAATCGAGACTCGCATACGCAATATCTACCGGTGCTCGCTGCGTGTCCGGCTGCGATTATTG CCAGCCGGCTCCGTCGTATCGCAACCTCCTCAGCATAAAGAATGGCCACCGCGGGATCCACAACGGCATCCCACC GTGCCCTTGAACAAGACGATTCCGCTCCGTGATAGCAGACCACCTGATGGCGCTTGTGCTGGCATCTTCACCTAC CATGATTCGACCTGTGAATCTGACATTGAGATTTTGACGCGAGACCCGTCACATCGCGTGCATTATGCCAATCAG CCCGATTATGATTTTGCCGCTGATCACGAGATTCCCAATGCGAGTACCATTGCCGATATACCTGTCCCATGGACA ACATGGTCCACGCATCGCCTAGACTGGCTCTCGGACATGTCACGGTGGTATGTCAACAATCAGATACAGGATGCC AAATCGTACAGAGTTCCCGAGTTAGAGAGCATGATTGTACTCAATCTTTGGAGTGACGGCGGACTCTGGACGGGC GACATGAGAATTGGCGACAGTATATACATGGGCATTGAATACATCGAGCTGGTTTACAACCGTTCTTCTGATGCT TTCAGGGCCCCTTATGTGTCTCCTTCGCAAAACCAGGCCCCTCCCACGAATGGTTCTTTTGGCAATGGGAATCCA TTGGAGCCGGATAGAAAGGACGAAAAGTGCAAGCCAGGACTTCCCAGGCAGACTATTCCTGGTTTCGACTGGCTT GCTTGTTCTGTCCTCTAA |
Transcript | >Pro_DTO377G3_2|g438.t1 ATGGCGGATTCAGATCCCTTACTGAGTGATCTCTGCTCAATATGCCATACCAATCCTCCCAAGTACCGCTGTCCA CGCTGCTCAACACGCACCTGCTCTCTACCCTGCACACGTCGCCACAAACTCTGGTCGCAATGTTCCGGCGTGCGC GATCCAGCCGCATACTTAAAGCGCCAAGAACTAAACACTCCATCTGCGTTCGATCGCGATTTTAATTTCATCACG AGTATCGAGCGCACTCTCGAGCGCGCGGAGAGAGAAGTTGATAACCGCGGGATTGATCTTGCGGGTGGTGCCCAG GCCGACGATGATAATTCCGAAGGTTCCCAACATCCGACTACTGGCCGTAAAAGGAAGCACCCGAACCAGGGCCTT GCCAAGGGTGAGGCTGCGTTCTTACGCGGTGCCGAAACTGCTGGTGTAAAAGTTCTTCGAGCTCCAAAGGGAATG TCGAGGAATAAGCAGAATGGGTCGCGTTTGCATCCCAAGCACAAGCGTCTTGCTTGGACCATAGAGTGGATTACG TCTGATGGGCTGAAGACTATTCGTGATTCTGTCATCGATACATGCTCTGTTGCTGAAGCCTATAACCGTTGTTGC CCACGTCCGAAGGATCAAGAGCCAGCTACCAAGCCAGTGAAGGAAGAGAAGAAAGATTTGGACACCCATAATACA ACTATCGCTGCACCCGGTGATCCTGTCACGACAGTGGTTGAAGAGGCAGATACAAAACAACCATCATCCCCAAAC AAAGACTCAACAAAAGAACCAGCTGATGACTCAACTGAGCAAACGGATAAAGTACCAAATCAGACCATCACCCCC CACCGCGGTCTCTACTTCTACCTTCACCGTCCGCGAACCACAACCAAAAAGCCTGTCTTAGCTCCTCTCTTGCAA TCCTCGACACTCAATGCTGTTCTGCGCAATCGGACAGTTCTAGAATTCCCTACGATTTATGCACTGCTAGAGTCA GCAGAGACATTGTTTTCAGACAAAGATAACTCTAAATTCATATCTGAAGAAGAGTATCTTCGCACTGCTGGACCA GATGAGATAGGCCAGTCTTCTACCGCGAGTGACGATGACGGTGCGGCTGGAAACAAAGTACTCGCCAGTTCTTCG GTGAATCTTCAAGATGTTGATGAGAACCTGGTACTGGAGGTATTGAAGAAAGATCTATTTGAACCAGTCTCGGAA ACTGAGCCAATCCTGCTGATCGTGACATCTCGACCAAAAGAGGAAACCACGATCAGCGCGGCTTCTGTCGAGTCA AAGATCCTTCGAGTTCACCTTCACTCCACCCGGGACCACCTTGGGAATATCAAATGCTCCAGGATCATCATGAAA ACTAACGTTTTGTCCTTCGGGATCACCGTGATTTATCTCGGCACGGTAGCATCAGCCTTATTAGTTGCCAGACCA CCGTCGCAGTTACCAGCCAAGAAACGTCCACAGGGATGCGATTGCTACACAATATCCGGGCCTGATCCGGGATAT TTTCAGCACTACAAGGTCTGGGACTTTCGGGCAGTGGATTTGAAGAAACATGCCAATCTCAATCTGTCGAAGCCC ATTGATTATGACGACGAGGACTGGGACGATGACGCTGAGGCCGAGGGCCAAGAACCGCAAAATGGCCGTCTCTCG CCCGGAGTCCATAATGAGAAAGACCCGGACCCCAGATCGCTGTTGTTCTACAAAACCTCATTCGAGAAAGACTGG AGCAGTCAAAACTGGGAACGTCGAGGCACCCCCATAGCCCCAGTCCTCATGATAAATTCAAAGCACAACGTCTTC CTCACCCGGGACTCGGACCAGAATAATCCTCACGCGACGTATCTCGTCCTGCGTACCACTCGTTTTTCAGAATAC ACCTCCACCGCGGAAATCGAGACTCGCATACGCAATATCTACCGGTGCTCGCTGCGTGTCCGGCTGCGATTATTG CCAGCCGGCTCCGTCGTATCGCAACCTCCTCAGCATAAAGAATGGCCACCGCGGGATCCACAACGGCATCCCACC GTGCCCTTGAACAAGACGATTCCGCTCCGTGATAGCAGACCACCTGATGGCGCTTGTGCTGGCATCTTCACCTAC CATGATTCGACCTGTGAATCTGACATTGAGATTTTGACGCGAGACCCGTCACATCGCGTGCATTATGCCAATCAG CCCGATTATGATTTTGCCGCTGATCACGAGATTCCCAATGCGAGTACCATTGCCGATATACCTGTCCCATGGACA ACATGGTCCACGCATCGCCTAGACTGGCTCTCGGACATGTCACGGTGGTATGTCAACAATCAGATACAGGATGCC AAATCGTACAGAGTTCCCGAGTTAGAGAGCATGATTGTACTCAATCTTTGGAGTGACGGCGGACTCTGGACGGGC GACATGAGAATTGGCGACAGTATATACATGGGCATTGAATACATCGAGCTGGTTTACAACCGTTCTTCTGATGCT TTCAGGGCCCCTTATGTGTCTCCTTCGCAAAACCAGGCCCCTCCCACGAATGGTTCTTTTGGCAATGGGAATCCA TTGGAGCCGGATAGAAAGGACGAAAAGTGCAAGCCAGGACTTCCCAGGCAGACTATTCCTGGTTTCGACTGGCTT GCTTGTTCTGTCCTCTAA |
Gene | >Pro_DTO377G3_2|g438.t1 ATGGCGGATTCAGATCCCTTACTGAGTGATCTCTGCTCAATATGGTATGCTTATGTGCATTTAAATTCTGGTACA CCTTGCATCTAACCTGTGTCCGTACAGCCATACCAATCCTCCCAAGTACCGCTGTCCACGCTGCTCAACACGCAC CTGCTCTCTACCCTGCACACGTCGCCACAAACTCTGGTCGCAATGTTCCGGCGTGCGCGATCCAGCCGCATACTT AAAGCGCCAAGAACTAAACACTCCATCTGCGTTCGATCGCGATTTTAATTTCATCACGAGTATCGAGCGCACTCT CGAGCGCGCGGAGAGAGAAGTTGATAACCGCGGGATTGATCTTGCGGGTGGTGCCCAGGCCGACGATGATAATTC CGAAGGTTCCCAACATCCGACTACTGGCCGTAAAAGGAAGCACCCGAACCAGGGCCTTGCCAAGGGTGAGGCTGC GTTCTTACGCGGTGCCGAAACTGCTGGTGTAAAAGTTCTTCGAGCTCCAAAGGGAATGTCGAGGAATAAGCAGAA TGGGTCGCGTTTGCATCCCAAGTGAGTTGGGAATCTCTCATATCTTTTGATTCGGAATTTGTACTGACGTATGTG TTTCTCAAGGCACAAGCGTCTTGCTTGGACCATAGAGTGGATTACGTCTGATGGGCTGAAGACTATTCGTGATTC TGTCATCGATACATGCTCTGTTGCTGAAGCCTATAACCGTTGTTGCCCACGTCCGAAGGATCAAGAGCCAGCTAC CAAGCCAGTGAAGGAAGAGAAGAAAGATTTGGACACCCATAATACAACTATCGCTGCACCCGGTGATCCTGTCAC GACAGTGGTTGAAGAGGCAGATACAAAACAACCATCATCCCCAAACAAAGACTCAACAAAAGAACCAGCTGATGA CTCAACTGAGCAAACGGATAAAGTACCAAATCAGACCATCACCCCCCACCGCGGTCTCTACTTCTACCTTCACCG TCCGCGAACCACAACCAAAAAGCCTGTCTTAGCTCCTCTCTTGCAATCCTCGACACTCAATGCTGTTCTGCGCAA TCGGACAGTTCTAGAATTCCCTACGATTTATGCACTGCTAGAGTCAGCAGAGACATTGTTTTCAGACAAAGATAA CTCTAAATTCATATCTGAAGAAGAGTATCTTCGCACTGCTGGACCAGATGAGATAGGCCAGTCTTCTACCGCGAG TGACGATGACGGTGCGGCTGGAAACAAAGTACTCGCCAGTTCTTCGGTGAATCTTCAAGATGTTGATGAGAACCT GGTACTGGAGGTATTGAAGAAAGATCTATTTGAACCAGTCTCGGAAACTGAGCCAGTATGAGTTATTCCGGCATG AAGAGAGATATCAGAAGACGTTAGCCAATTTGGCACATCTACCAGACAATGTACGATACATAGGGACAGCTAATT ATCAGTCAATTGTACAATTGTACAACGGGTCACCTCTCAGAAAAATTATCAGGCTTAGATGCAGACGTATTTTCC TGAAAACCACAGATCCTGCTGATCGTGACATCTCGACCAAAAGAGGAAACCACGATCAGCGCGGCTTCTGTCGAG TCAAAGATCCTTCGAGTTCACCTTCACTCCACCCGGGACCACCTTGGGAATATCAAATGCTCCAGGATCATCATG AAAACTAACGTTTTGTCCTTCGGGATCACCGTGATTTATCTCGGCACGGTAGCATCAGCCTTATTAGTTGCCAGA CCACCGTCGCAGTTACCAGCCAAGAAACGTCCACAGGGATGCGATTGCTACACAATATCCGGGCCTGATCCGGGA TATTTTCAGCACTACAAGGTCTGGGACTTTCGGGCAGTGGATTTGAAGAAACATGCCAATCTCAATCTGTCGAAG CCCATTGATTATGACGACGAGGACTGGGACGATGACGCTGAGGCCGAGGGCCAAGAACCGCAAAATGGCCGTCTC TCGCCCGGAGTCCATAATGAGAAAGACCCGGACCCCAGATCGCTGTTGTTCTACAAAACCTCATTCGAGAAAGAC TGGAGCAGTCAAAACTGGGAACGTCGAGGCACCCCCATAGCCCCAGTCCTCATGATAAATTCAAAGCACAACGTC TTCCTCACCCGGGACTCGGACCAGAATAATCCTCACGCGACGTATCTCGTCCTGCGTACCACTCGTTTTTCAGAA TACACCTCCACCGCGGAAATCGAGACTCGCATACGCAATATCTACCGGTGCTCGCTGCGTGTCCGGCTGCGATTA TTGCCAGCCGGCTCCGTCGTATCGCAACCTCCTCAGCATAAAGAATGGCCACCGCGGGATCCACAACGGCATCCC ACCGTGCCCTTGAACAAGACGATTCCGCTCCGTGATAGCAGACCACCTGATGGCGCTTGTGCTGGCATCTTCACC TACCATGATTCGACCTGTGAATCTGACATTGAGATTTTGACGCGAGACCCGTCACATCGCGTGCATTATGCCAAT CAGCCCGATTATGATTTTGCCGCTGATCACGAGATTCCCAATGCGAGTACCATTGCCGATATACCTGTCCCATGG ACAACATGGTCCACGCATCGCCTAGACTGGCTCTCGGACATGTCACGGTGGTATGTCAACAATCAGATACAGGAT GCCAAATCGTACAGAGTTCCCGAGTTAGAGAGCATGATTGTACTCAATCTTTGGAGTGACGGCGGACTCTGGACG GGCGACATGAGAATTGGCGACAGTATATACATGGGCATTGAATACATCGAGCTGGTTTACAACCGTTCTTCTGAT GCTTTCAGGGCCCCTTATGTGTCTCCTTCGCAAAACCAGGCCCCTCCCACGAATGGTTCTTTTGGCAATGGGAAT CCATTGGAGCCGGATAGAAAGGACGAAAAGTGCAAGCCAGGTAGGCAGGGCCGCGAGTGCAGAAGAAAGAAGTGG AGGAACAGGCCTCTTCATGAATCCTGTCGAAGACCATGTAACATTGATCAACTCTAGGACTTCCCAGGCAGACTG TTTGTATTATTATCAGTTTTATTCAATATTTTACTTTTAGATTCCTGGTTTCGACTGGCTTGCTTGTTCTGTCCT CTAA |