Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4354.t1
Gene name
Locationscaffold_09:36222..37146
Strand+
Gene length (bp)924
Transcript length (bp)924
Coding sequence length (bp)924
Protein length (aa) 308

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 1.4E-04 16 50
PF00400 WD40 WD domain, G-beta repeat 1.3E-05 64 92
PF00400 WD40 WD domain, G-beta repeat 1.4E-08 102 136
PF00400 WD40 WD domain, G-beta repeat 9.0E-11 140 178
PF00400 WD40 WD domain, G-beta repeat 2.3E-09 182 220
PF00400 WD40 WD domain, G-beta repeat 2.1E-05 227 261
PF00400 WD40 WD domain, G-beta repeat 2.8E-03 268 304
PF12894 ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 1.2E-04 150 193

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4354.t1
MADLVIPSFGRLVASKTLDGHTGFVWDVALSGNGQILASISNDMMIRLWNANTGLQRGAARNNGHSTWVRSVRFS
PAGRFLATASDDMTIRISDVNTGFTYRMLQGHTGKVRAVEFSPDGKTLASASDDFTVRLWNAGLGSLVKTLNGHS
GWVRAVAFSPDGKTVASTSDDNTIRLWDTTTGKEIHRLNGHESSTRAVCFSPDGKLLASGSQDKDLRIWDTNSGA
MLNVLRGHSGPLRVIAFSSDGNLVASAADDLTIRVWAVPLGFTCVRILTGYSGWVRAITLSRDENVVAYTSDDMT
IKIWISA*
Coding >Pro_DTO377G3_2|g4354.t1
ATGGCGGACTTAGTCATTCCTTCCTTTGGGAGGCTAGTTGCATCCAAAACTCTTGATGGCCATACTGGCTTCGTT
TGGGATGTGGCTCTTTCCGGCAATGGTCAAATCCTCGCCTCAATTTCCAATGACATGATGATCCGTCTATGGAAC
GCCAACACCGGTCTCCAGCGCGGCGCCGCAAGAAACAACGGCCATTCCACGTGGGTGCGCTCTGTGAGGTTTTCC
CCCGCAGGTCGATTCTTAGCCACTGCTTCCGATGATATGACCATTCGTATCAGCGACGTGAACACCGGGTTTACC
TACCGCATGCTGCAGGGTCACACTGGCAAAGTTCGAGCGGTGGAATTTTCCCCCGACGGCAAAACTCTCGCTTCA
GCCTCAGATGATTTCACTGTGCGACTGTGGAATGCAGGCTTAGGTTCGCTGGTCAAAACCCTCAATGGGCACTCG
GGCTGGGTGCGCGCTGTGGCCTTTTCGCCTGACGGCAAGACTGTCGCTTCAACCTCGGACGATAATACAATTCGT
CTCTGGGACACAACCACCGGCAAAGAAATCCATCGATTAAATGGCCATGAATCCTCAACCAGGGCCGTCTGCTTC
TCTCCTGATGGGAAGCTGCTAGCGTCGGGTTCGCAGGACAAGGACCTGCGCATCTGGGATACGAATTCTGGCGCC
ATGCTCAACGTCCTCCGGGGACACTCTGGACCTCTGCGCGTGATCGCATTTTCTAGCGATGGGAACCTGGTGGCA
TCAGCGGCCGATGACCTGACAATCCGCGTATGGGCTGTGCCATTAGGGTTTACCTGCGTCCGAATATTAACGGGC
TACTCCGGATGGGTTCGAGCTATTACTTTGTCGCGCGATGAAAACGTAGTAGCTTACACGTCTGATGACATGACT
ATCAAGATTTGGATTTCGGCGTGA
Transcript >Pro_DTO377G3_2|g4354.t1
ATGGCGGACTTAGTCATTCCTTCCTTTGGGAGGCTAGTTGCATCCAAAACTCTTGATGGCCATACTGGCTTCGTT
TGGGATGTGGCTCTTTCCGGCAATGGTCAAATCCTCGCCTCAATTTCCAATGACATGATGATCCGTCTATGGAAC
GCCAACACCGGTCTCCAGCGCGGCGCCGCAAGAAACAACGGCCATTCCACGTGGGTGCGCTCTGTGAGGTTTTCC
CCCGCAGGTCGATTCTTAGCCACTGCTTCCGATGATATGACCATTCGTATCAGCGACGTGAACACCGGGTTTACC
TACCGCATGCTGCAGGGTCACACTGGCAAAGTTCGAGCGGTGGAATTTTCCCCCGACGGCAAAACTCTCGCTTCA
GCCTCAGATGATTTCACTGTGCGACTGTGGAATGCAGGCTTAGGTTCGCTGGTCAAAACCCTCAATGGGCACTCG
GGCTGGGTGCGCGCTGTGGCCTTTTCGCCTGACGGCAAGACTGTCGCTTCAACCTCGGACGATAATACAATTCGT
CTCTGGGACACAACCACCGGCAAAGAAATCCATCGATTAAATGGCCATGAATCCTCAACCAGGGCCGTCTGCTTC
TCTCCTGATGGGAAGCTGCTAGCGTCGGGTTCGCAGGACAAGGACCTGCGCATCTGGGATACGAATTCTGGCGCC
ATGCTCAACGTCCTCCGGGGACACTCTGGACCTCTGCGCGTGATCGCATTTTCTAGCGATGGGAACCTGGTGGCA
TCAGCGGCCGATGACCTGACAATCCGCGTATGGGCTGTGCCATTAGGGTTTACCTGCGTCCGAATATTAACGGGC
TACTCCGGATGGGTTCGAGCTATTACTTTGTCGCGCGATGAAAACGTAGTAGCTTACACGTCTGATGACATGACT
ATCAAGATTTGGATTTCGGCGTGA
Gene >Pro_DTO377G3_2|g4354.t1
ATGGCGGACTTAGTCATTCCTTCCTTTGGGAGGCTAGTTGCATCCAAAACTCTTGATGGCCATACTGGCTTCGTT
TGGGATGTGGCTCTTTCCGGCAATGGTCAAATCCTCGCCTCAATTTCCAATGACATGATGATCCGTCTATGGAAC
GCCAACACCGGTCTCCAGCGCGGCGCCGCAAGAAACAACGGCCATTCCACGTGGGTGCGCTCTGTGAGGTTTTCC
CCCGCAGGTCGATTCTTAGCCACTGCTTCCGATGATATGACCATTCGTATCAGCGACGTGAACACCGGGTTTACC
TACCGCATGCTGCAGGGTCACACTGGCAAAGTTCGAGCGGTGGAATTTTCCCCCGACGGCAAAACTCTCGCTTCA
GCCTCAGATGATTTCACTGTGCGACTGTGGAATGCAGGCTTAGGTTCGCTGGTCAAAACCCTCAATGGGCACTCG
GGCTGGGTGCGCGCTGTGGCCTTTTCGCCTGACGGCAAGACTGTCGCTTCAACCTCGGACGATAATACAATTCGT
CTCTGGGACACAACCACCGGCAAAGAAATCCATCGATTAAATGGCCATGAATCCTCAACCAGGGCCGTCTGCTTC
TCTCCTGATGGGAAGCTGCTAGCGTCGGGTTCGCAGGACAAGGACCTGCGCATCTGGGATACGAATTCTGGCGCC
ATGCTCAACGTCCTCCGGGGACACTCTGGACCTCTGCGCGTGATCGCATTTTCTAGCGATGGGAACCTGGTGGCA
TCAGCGGCCGATGACCTGACAATCCGCGTATGGGCTGTGCCATTAGGGTTTACCTGCGTCCGAATATTAACGGGC
TACTCCGGATGGGTTCGAGCTATTACTTTGTCGCGCGATGAAAACGTAGTAGCTTACACGTCTGATGACATGACT
ATCAAGATTTGGATTTCGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail