© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4349.t1 |
| Gene name | |
| Location | scaffold_09:19097..21088 |
| Strand | + |
| Gene length (bp) | 1991 |
| Transcript length (bp) | 1872 |
| Coding sequence length (bp) | 1872 |
| Protein length (aa) | 624 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05653 | Mg_trans_NIPA | Magnesium transporter NIPA | 2.7E-10 | 214 | 325 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015095 | magnesium ion transmembrane transporter activity | Yes |
| GO:0015693 | magnesium ion transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0030001 | metal ion transport | No |
| GO:0006812 | cation transport | No |
| GO:0006811 | ion transport | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0046873 | metal ion transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 11 | 33 | 22 |
| 2 | 59 | 81 | 22 |
| 3 | 86 | 105 | 19 |
| 4 | 112 | 134 | 22 |
| 5 | 154 | 176 | 22 |
| 6 | 210 | 232 | 22 |
| 7 | 247 | 269 | 22 |
| 8 | 276 | 295 | 19 |
| 9 | 305 | 327 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4349.t1 MGNLGDLSPEGSVAVGVIVGLISTSLQAIGLTLQRKSHLLEDEKHPYDVRRPPYKRRRWQIGMGMFVISNIVGST IQITTLPLPVLSTLQASGLVFNTIFATLILSEPFTRYSLAGTVLVCAGALLIATFGAIGEPAHTLDQLLDLLQRR SFLLWMGATTLLVVLVLVGTKMLKLFLPSSRAKPSASGHFSPHLLRLQSRMRLIRGMSYGFVSGILSAHSLLLAK SAVELLVRTMVDGVNQFNRWQSWVILLGMIFLALTQLFYLHRGLKLCSTSVLYPFVFCIYNIIAILDGLIYFRQM SQLTGFHAGLIALGTMILLGGVLCLSWRLEDIDTHTAVTTLGSTQTGLGPGMGIVEEHSPASPGLLDGQDEESQI RECEPLLNPKTHTRHLSYQRGRAPSLPLNLHFDRDSADINPASIWAELDDSDYESTDGHRQSSIDRLRSVSGSAT LNGSLRGLTRQSTAGAITHDRERGSRRIQETSREDPWLRTSGPQSGLSAVHRKRRRGGDPFTSSSNQDIGGYGTI QGDGDDTHWRGDSPIIRSSARSGLLNGSKRALAGAWRFGRQYLPRWSSPPAGIDPEDGSSSSLLPHSGVPLPRTH YPQGIPVPESDTFRPSSSPTTSI* |
| Coding | >Pro_DTO377G3_2|g4349.t1 ATGGGCAATCTAGGTGACTTGTCACCGGAGGGAAGTGTTGCGGTTGGTGTAATCGTTGGACTGATATCAACCAGC CTCCAAGCTATCGGGCTCACGCTCCAGCGCAAGTCGCATTTGCTCGAGGATGAGAAGCACCCCTACGATGTGCGC AGACCCCCCTACAAGCGCCGACGATGGCAAATAGGAATGGGGATGTTTGTCATTTCCAATATTGTTGGAAGTACC ATACAAATCACTACACTTCCGTTACCAGTCCTCTCGACGCTCCAAGCGTCCGGACTAGTGTTCAATACTATATTT GCGACCCTCATCCTCAGTGAACCCTTTACCCGATATTCTCTCGCAGGCACCGTTCTCGTCTGCGCCGGCGCGTTG TTAATTGCGACCTTCGGGGCCATCGGGGAACCCGCACATACCTTGGATCAGCTCCTGGACCTTCTTCAGCGACGG TCGTTTCTTCTGTGGATGGGTGCCACTACACTCCTGGTTGTCCTGGTACTTGTTGGTACCAAAATGCTGAAACTC TTCCTACCGTCCTCACGCGCGAAACCCTCGGCCTCTGGTCATTTTTCACCACATCTACTGCGATTGCAAAGCCGA ATGAGATTGATCCGCGGCATGAGCTATGGATTTGTCAGTGGTATACTGTCGGCTCACTCCCTTTTGCTAGCAAAG TCGGCCGTGGAGCTTCTCGTGCGCACAATGGTAGACGGTGTGAACCAGTTCAATCGTTGGCAATCATGGGTTATC CTGCTAGGAATGATCTTCCTAGCACTCACACAGCTATTCTATCTCCATAGGGGCCTGAAGCTGTGTAGTACTAGT GTACTATATCCTTTTGTGTTCTGCATCTATAACATCATTGCTATCTTGGATGGCCTGATCTACTTCCGGCAAATG TCCCAGCTGACGGGCTTCCACGCCGGTCTCATCGCTTTGGGAACAATGATTCTCCTAGGTGGTGTTTTGTGCCTG TCATGGCGACTTGAGGATATCGACACTCATACCGCTGTCACCACTTTGGGTTCCACGCAAACCGGACTTGGGCCG GGTATGGGAATCGTGGAAGAGCACTCTCCGGCATCACCTGGTTTGCTGGACGGTCAGGATGAGGAATCACAGATT AGAGAATGCGAGCCACTTCTCAACCCGAAAACCCATACTCGCCATCTTTCATATCAGCGGGGAAGAGCTCCGAGC CTGCCACTCAACTTGCATTTTGATCGCGACTCAGCTGATATAAACCCCGCATCTATTTGGGCTGAACTCGACGAT TCGGACTATGAATCTACCGATGGACACAGGCAGTCCTCCATAGATCGCCTGCGTAGCGTCAGTGGTAGTGCAACC CTCAACGGCTCATTGCGGGGTCTGACACGGCAATCGACGGCCGGCGCTATTACACACGATCGCGAAAGAGGATCT CGCCGAATCCAAGAAACATCACGTGAGGACCCATGGCTTCGCACCTCAGGACCTCAGAGTGGGTTATCGGCCGTC CATCGTAAACGTCGGAGGGGCGGGGATCCGTTCACCTCATCGTCTAACCAAGACATCGGTGGGTACGGAACCATC CAAGGGGATGGCGATGATACTCACTGGCGCGGCGACTCCCCTATCATTCGTTCGTCTGCCAGGTCTGGTCTTCTT AATGGCTCAAAAAGGGCTCTGGCAGGTGCCTGGAGGTTTGGGAGACAATATCTGCCTCGATGGAGTAGCCCGCCG GCTGGGATTGACCCAGAAGATGGCTCTTCCTCATCCCTACTCCCCCACTCTGGCGTCCCTCTTCCACGAACACAC TATCCACAGGGAATCCCGGTTCCTGAATCTGACACCTTTCGGCCATCGTCATCCCCAACCACCTCTATATAA |
| Transcript | >Pro_DTO377G3_2|g4349.t1 ATGGGCAATCTAGGTGACTTGTCACCGGAGGGAAGTGTTGCGGTTGGTGTAATCGTTGGACTGATATCAACCAGC CTCCAAGCTATCGGGCTCACGCTCCAGCGCAAGTCGCATTTGCTCGAGGATGAGAAGCACCCCTACGATGTGCGC AGACCCCCCTACAAGCGCCGACGATGGCAAATAGGAATGGGGATGTTTGTCATTTCCAATATTGTTGGAAGTACC ATACAAATCACTACACTTCCGTTACCAGTCCTCTCGACGCTCCAAGCGTCCGGACTAGTGTTCAATACTATATTT GCGACCCTCATCCTCAGTGAACCCTTTACCCGATATTCTCTCGCAGGCACCGTTCTCGTCTGCGCCGGCGCGTTG TTAATTGCGACCTTCGGGGCCATCGGGGAACCCGCACATACCTTGGATCAGCTCCTGGACCTTCTTCAGCGACGG TCGTTTCTTCTGTGGATGGGTGCCACTACACTCCTGGTTGTCCTGGTACTTGTTGGTACCAAAATGCTGAAACTC TTCCTACCGTCCTCACGCGCGAAACCCTCGGCCTCTGGTCATTTTTCACCACATCTACTGCGATTGCAAAGCCGA ATGAGATTGATCCGCGGCATGAGCTATGGATTTGTCAGTGGTATACTGTCGGCTCACTCCCTTTTGCTAGCAAAG TCGGCCGTGGAGCTTCTCGTGCGCACAATGGTAGACGGTGTGAACCAGTTCAATCGTTGGCAATCATGGGTTATC CTGCTAGGAATGATCTTCCTAGCACTCACACAGCTATTCTATCTCCATAGGGGCCTGAAGCTGTGTAGTACTAGT GTACTATATCCTTTTGTGTTCTGCATCTATAACATCATTGCTATCTTGGATGGCCTGATCTACTTCCGGCAAATG TCCCAGCTGACGGGCTTCCACGCCGGTCTCATCGCTTTGGGAACAATGATTCTCCTAGGTGGTGTTTTGTGCCTG TCATGGCGACTTGAGGATATCGACACTCATACCGCTGTCACCACTTTGGGTTCCACGCAAACCGGACTTGGGCCG GGTATGGGAATCGTGGAAGAGCACTCTCCGGCATCACCTGGTTTGCTGGACGGTCAGGATGAGGAATCACAGATT AGAGAATGCGAGCCACTTCTCAACCCGAAAACCCATACTCGCCATCTTTCATATCAGCGGGGAAGAGCTCCGAGC CTGCCACTCAACTTGCATTTTGATCGCGACTCAGCTGATATAAACCCCGCATCTATTTGGGCTGAACTCGACGAT TCGGACTATGAATCTACCGATGGACACAGGCAGTCCTCCATAGATCGCCTGCGTAGCGTCAGTGGTAGTGCAACC CTCAACGGCTCATTGCGGGGTCTGACACGGCAATCGACGGCCGGCGCTATTACACACGATCGCGAAAGAGGATCT CGCCGAATCCAAGAAACATCACGTGAGGACCCATGGCTTCGCACCTCAGGACCTCAGAGTGGGTTATCGGCCGTC CATCGTAAACGTCGGAGGGGCGGGGATCCGTTCACCTCATCGTCTAACCAAGACATCGGTGGGTACGGAACCATC CAAGGGGATGGCGATGATACTCACTGGCGCGGCGACTCCCCTATCATTCGTTCGTCTGCCAGGTCTGGTCTTCTT AATGGCTCAAAAAGGGCTCTGGCAGGTGCCTGGAGGTTTGGGAGACAATATCTGCCTCGATGGAGTAGCCCGCCG GCTGGGATTGACCCAGAAGATGGCTCTTCCTCATCCCTACTCCCCCACTCTGGCGTCCCTCTTCCACGAACACAC TATCCACAGGGAATCCCGGTTCCTGAATCTGACACCTTTCGGCCATCGTCATCCCCAACCACCTCTATATAA |
| Gene | >Pro_DTO377G3_2|g4349.t1 ATGGGCAATCTAGGTGACTTGTCACCGGAGGGAAGTGTTGCGGTAAGACTACGGAAATCAGGATATACAGCGAGA TAAGATCCAAAGCTAATTATGTATCAGGTTGGTGTAATCGTTGGACTGATATCAACCAGCCTCCAAGCTATCGGG CTCACGCTCCAGCGCAAGTCGCATTTGCTCGAGGATGAGAAGCACCCCTACGATGTGCGCAGACCCCCCTACAAG CGCCGACGATGGCAAATAGGAATGGGGATGTTTGTCATTTCCAATATTGTTGGAAGTACCATACAAATCACTACA CTTCCGTTACCAGTCCTCTCGACGCTCCAAGCGGTCAGTAGTTCCCCCTCCATGCATGCCGGAGATTGGTTGCTG ATAGGAATGCCGAATAGTCCGGACTAGTGTTCAATACTATATTTGCGACCCTCATCCTCAGTGAACCCTTTACCC GATATTCTCTCGCAGGCACCGTTCTCGTCTGCGCCGGCGCGTTGTTAATTGCGACCTTCGGGGCCATCGGGGAAC CCGCACATACCTTGGATCAGCTCCTGGACCTTCTTCAGCGACGGTCGTTTCTTCTGTGGATGGGTGCCACTACAC TCCTGGTTGTCCTGGTACTTGTTGGTACCAAAATGCTGAAACTCTTCCTACCGTCCTCACGCGCGAAACCCTCGG CCTCTGGTCATTTTTCACCACATCTACTGCGATTGCAAAGCCGAATGAGATTGATCCGCGGCATGAGCTATGGAT TTGTCAGTGGTATACTGTCGGCTCACTCCCTTTTGCTAGCAAAGTCGGCCGTGGAGCTTCTCGTGCGCACAATGG TAGACGGTGTGAACCAGTTCAATCGTTGGCAATCATGGGTTATCCTGCTAGGAATGATCTTCCTAGCACTCACAC AGCTATTCTATCTCCATAGGGGCCTGAAGCTGTGTAGTACTAGTGTACTATATCCTTTTGTGTTCTGCATCTATA ACATCATTGCTATCTTGGATGGCCTGATCTACTTCCGGCAAATGTCCCAGCTGACGGGCTTCCACGCCGGTCTCA TCGCTTTGGGAACAATGATTCTCCTAGGTGGTGTTTTGTGCCTGTCATGGCGACTTGAGGATATCGACACTCATA CCGCTGTCACCACTTTGGGTTCCACGCAAACCGGACTTGGGCCGGGTATGGGAATCGTGGAAGAGCACTCTCCGG CATCACCTGGTTTGCTGGACGGTCAGGATGAGGAATCACAGATTAGAGAATGCGAGCCACTTCTCAACCCGAAAA CCCATACTCGCCATCTTTCATATCAGCGGGGAAGAGCTCCGAGCCTGCCACTCAACTTGCATTTTGATCGCGACT CAGCTGATATAAACCCCGCATCTATTTGGGCTGAACTCGACGATTCGGACTATGAATCTACCGATGGACACAGGC AGTCCTCCATAGATCGCCTGCGTAGCGTCAGTGGTAGTGCAACCCTCAACGGCTCATTGCGGGGTCTGACACGGC AATCGACGGCCGGCGCTATTACACACGATCGCGAAAGAGGATCTCGCCGAATCCAAGAAACATCACGTGAGGACC CATGGCTTCGCACCTCAGGACCTCAGAGTGGGTTATCGGCCGTCCATCGTAAACGTCGGAGGGGCGGGGATCCGT TCACCTCATCGTCTAACCAAGACATCGGTGGGTACGGAACCATCCAAGGGGATGGCGATGATACTCACTGGCGCG GCGACTCCCCTATCATTCGTTCGTCTGCCAGGTCTGGTCTTCTTAATGGCTCAAAAAGGGCTCTGGCAGGTGCCT GGAGGTTTGGGAGACAATATCTGCCTCGATGGAGTAGCCCGCCGGCTGGGATTGACCCAGAAGATGGCTCTTCCT CATCCCTACTCCCCCACTCTGGCGTCCCTCTTCCACGAACACACTATCCACAGGGAATCCCGGTTCCTGAATCTG ACACCTTTCGGCCATCGTCATCCCCAACCACCTCTATATAA |