Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4338.t1
Gene name
Locationscaffold_08:735191..736212
Strand+
Gene length (bp)1021
Transcript length (bp)897
Coding sequence length (bp)897
Protein length (aa) 299

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13405 EF-hand_6 EF-hand domain 1.4E-06 130 159
PF13499 EF-hand_7 EF-hand domain pair 1.3E-07 130 224
PF13202 EF-hand_5 EF hand 2.4E-02 131 149
PF13202 EF-hand_5 EF hand 1.9E-02 203 223

GO

GO Term Description Terminal node
GO:0005509 calcium ion binding Yes
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4338.t1
MANNPTFKPSPLSFGSPRASPFRRPSTPNSPPSASRTGGTPGSSPSRAYTPMVSPSKLNQSYTVEDGESRSPKNE
RPIPQPNFAREFSPSPTKGGKSPGSLSPIHGSRTGGVASPAGDAAGKLPAQQVREIREAFQVLDRDNDGLVDKDD
VIDVLTTLGQDSSSSTLSRFFPPGAGNTMNFPTFLNTLSGLMASMSPSQELLNALAAFDDDDSGQIDATELRDAL
LHTSPEDGEERLTERQIDEVFSGFIGRPAFIGRGAKSGGMGKRGEVFQYHDFVRSIMGGDNGNSAKNEGDAHV*
Coding >Pro_DTO377G3_2|g4338.t1
ATGGCCAACAATCCCACATTCAAACCATCGCCGTTATCCTTTGGGTCGCCGAGGGCATCCCCGTTCCGGCGCCCA
TCCACTCCAAATTCCCCGCCTTCGGCCAGTCGCACAGGAGGCACCCCGGGGAGCTCTCCCAGTCGGGCATATACA
CCTATGGTATCTCCTAGCAAGCTCAATCAATCATATACAGTGGAGGATGGTGAATCGCGTTCTCCGAAGAACGAG
CGGCCCATTCCCCAGCCGAATTTTGCCAGAGAGTTCTCTCCTTCCCCAACGAAAGGAGGAAAGTCGCCAGGCAGC
TTATCCCCAATCCATGGGTCAAGGACGGGTGGAGTTGCAAGCCCAGCTGGCGACGCGGCTGGGAAGCTGCCAGCG
CAACAAGTGAGGGAGATCAGAGAAGCTTTCCAGGTTCTCGATAGGGATAACGACGGGCTTGTGGACAAAGATGAT
GTGATTGATGTGCTGACAACTTTGGGCCAAGACTCGTCATCCTCTACGCTCTCGCGCTTCTTTCCACCAGGAGCA
GGCAATACTATGAATTTTCCAACCTTCTTGAATACCCTTTCTGGGCTCATGGCATCGATGTCACCTTCACAAGAG
CTTCTCAACGCTCTTGCTGCGTTTGATGATGATGACAGCGGGCAAATCGATGCCACGGAATTACGTGATGCTCTC
CTACATACCTCCCCAGAAGATGGAGAGGAAAGATTGACTGAGAGACAGATCGATGAAGTCTTCAGTGGGTTTATA
GGGCGCCCAGCATTTATTGGTCGGGGAGCGAAGTCAGGCGGGATGGGTAAGAGGGGTGAGGTTTTCCAGTATCAC
GACTTCGTGCGCAGCATCATGGGTGGGGATAATGGAAATAGTGCCAAGAATGAAGGAGATGCACATGTATGA
Transcript >Pro_DTO377G3_2|g4338.t1
ATGGCCAACAATCCCACATTCAAACCATCGCCGTTATCCTTTGGGTCGCCGAGGGCATCCCCGTTCCGGCGCCCA
TCCACTCCAAATTCCCCGCCTTCGGCCAGTCGCACAGGAGGCACCCCGGGGAGCTCTCCCAGTCGGGCATATACA
CCTATGGTATCTCCTAGCAAGCTCAATCAATCATATACAGTGGAGGATGGTGAATCGCGTTCTCCGAAGAACGAG
CGGCCCATTCCCCAGCCGAATTTTGCCAGAGAGTTCTCTCCTTCCCCAACGAAAGGAGGAAAGTCGCCAGGCAGC
TTATCCCCAATCCATGGGTCAAGGACGGGTGGAGTTGCAAGCCCAGCTGGCGACGCGGCTGGGAAGCTGCCAGCG
CAACAAGTGAGGGAGATCAGAGAAGCTTTCCAGGTTCTCGATAGGGATAACGACGGGCTTGTGGACAAAGATGAT
GTGATTGATGTGCTGACAACTTTGGGCCAAGACTCGTCATCCTCTACGCTCTCGCGCTTCTTTCCACCAGGAGCA
GGCAATACTATGAATTTTCCAACCTTCTTGAATACCCTTTCTGGGCTCATGGCATCGATGTCACCTTCACAAGAG
CTTCTCAACGCTCTTGCTGCGTTTGATGATGATGACAGCGGGCAAATCGATGCCACGGAATTACGTGATGCTCTC
CTACATACCTCCCCAGAAGATGGAGAGGAAAGATTGACTGAGAGACAGATCGATGAAGTCTTCAGTGGGTTTATA
GGGCGCCCAGCATTTATTGGTCGGGGAGCGAAGTCAGGCGGGATGGGTAAGAGGGGTGAGGTTTTCCAGTATCAC
GACTTCGTGCGCAGCATCATGGGTGGGGATAATGGAAATAGTGCCAAGAATGAAGGAGATGCACATGTATGA
Gene >Pro_DTO377G3_2|g4338.t1
ATGGTAACTAAGGATCCTGAGGGATGATATAACTATTAAAAACTAATCAACAATGACCCAGGCCAACAATCCCAC
ATTCAAACCATCGCCGTTATCCTTTGGGTCGCCGAGGGCATCCCCGTTCCGGCGCCCATCCACTCCAAATTCCCC
GCCTTCGGCCAGTCGCACAGGAGGCACCCCGGGGAGCTCTCCCAGTCGGGCATATACACCTATGGTATCTCCTAG
CAAGCTCAATCAATCATATACAGTGGAGGATGGTGAATCGCGTTCTCCGAAGAACGAGCGGCCCATTCCCCAGCC
GAATTTTGCCAGAGAGTTCTCTCCTTCCCCAACGAAAGGAGGAAAGTCGCCAGGCAGCTTATCCCCAATCCATGG
GTCAAGGACGGGTGGAGTTGCAAGCCCAGCTGGCGACGCGGCTGGGAAGCTGCCAGCGCAACAAGTGAGGGAGAT
CAGAGAAGCTTTCCAGGTTCTCGATAGGGATAACGACGGGCTTGTGGACAAAGATGATGTGATTGATGTGCTGAC
AACTTTGGGTAGGAGAAAATCTACCTATATTTTTTGGAAATTCGGACGAGGGACTAATCCGAGTATCTGAACAGG
CCAAGACTCGTCATCCTCTACGCTCTCGCGCTTCTTTCCACCAGGAGCAGGCAATACTATGAATTTTCCAACCTT
CTTGAATACCCTTTCTGGGCTCATGGCATCGATGTCACCTTCACAAGAGCTTCTCAACGCTCTTGCTGCGTTTGA
TGATGATGACAGCGGGCAAATCGATGCCACGGAATTACGTGATGCTCTCCTACATACCTCCCCAGAAGATGGAGA
GGAAAGATTGACTGAGAGACAGATCGATGAAGTCTTCAGTGGGTTTATAGGGCGCCCAGCATTTATTGGTCGGGG
AGCGAAGTCAGGCGGGATGGGTAAGAGGGGTGAGGTTTTCCAGTATCACGACTTCGTGCGCAGCATCATGGGTGG
GGATAATGGAAATAGTGCCAAGAATGAAGGAGATGCACATGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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