Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g4329.t1
Gene name
Location	scaffold_08:712048..713134
Strand	+
Gene length (bp)	1086
Transcript length (bp)	867
Coding sequence length (bp)	867
Protein length (aa)	289

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04193	PQ-loop	PQ loop repeat	6.1E-17	12	70
PF04193	PQ-loop	PQ loop repeat	1.7E-16	167	225

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	50	72	22
3	95	117	22
4	124	146	22
5	161	183	22
6	196	218	22
7	238	257	19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g4329.t1 MTPQLEIFIRALSRFLGWAYMLCWSGSFYPQPITNWRRKSTVGLSIDLSTINPLGFVCYAIYTSAFLYSPVIRSQ YAARHPASIEPTVRFNDFAFAAHAVVMCIIMYSQFWPFIWGFHVSRFQRVSWLMAGIFWGCVLSPLVVIVAVLAQ SPDGGYDPSTWAWIDVIYSFSYVKLLITIVKYMPQVALNYKRQSTVGWNIGTILLDMAGGVLSMLQLVLDSSLQS DWSGITGNPVKLLLGNVTIFFDAIFCIQHYVLYRDTPDLKRTSGPSEQSPLLDGQDDTVGDRV*
Coding	>Pro_DTO377G3_2\|g4329.t1 ATGACTCCTCAACTAGAGATATTTATTAGAGCTTTGTCCCGCTTTTTAGGATGGGCATATATGCTCTGCTGGTCG GGGTCTTTTTATCCCCAGCCGATCACCAACTGGAGACGCAAGTCCACAGTCGGCTTATCCATTGATTTATCCACC ATCAACCCTCTGGGTTTTGTCTGCTATGCGATATATACCTCCGCGTTTCTCTACTCTCCCGTCATAAGATCACAG TATGCGGCCCGCCACCCTGCCTCAATCGAACCCACCGTTCGGTTCAACGATTTCGCATTTGCGGCACACGCGGTG GTCATGTGCATCATAATGTACTCGCAGTTCTGGCCTTTCATCTGGGGCTTCCACGTTTCCCGCTTCCAAAGAGTC AGTTGGTTAATGGCTGGAATATTCTGGGGGTGTGTCCTGTCTCCTCTGGTGGTTATCGTGGCCGTGTTGGCACAA AGTCCGGATGGAGGGTACGATCCTTCCACTTGGGCGTGGATTGACGTGATATACTCGTTTTCGTACGTCAAACTC CTGATCACCATTGTGAAATATATGCCCCAAGTGGCGTTGAACTACAAACGACAATCTACAGTAGGCTGGAACATT GGAACTATCCTTCTGGATATGGCTGGTGGTGTACTTTCAATGCTTCAACTGGTGCTTGACTCCAGCCTTCAAAGT GACTGGAGCGGTATTACCGGCAACCCAGTCAAGCTACTGCTGGGCAACGTTACAATCTTCTTCGATGCAATCTTC TGCATCCAGCACTACGTCTTATACCGAGATACTCCTGACCTGAAGAGAACATCTGGTCCGAGCGAGCAATCGCCC CTCTTGGATGGACAAGACGATACTGTGGGAGATCGAGTATGA
Transcript	>Pro_DTO377G3_2\|g4329.t1 ATGACTCCTCAACTAGAGATATTTATTAGAGCTTTGTCCCGCTTTTTAGGATGGGCATATATGCTCTGCTGGTCG GGGTCTTTTTATCCCCAGCCGATCACCAACTGGAGACGCAAGTCCACAGTCGGCTTATCCATTGATTTATCCACC ATCAACCCTCTGGGTTTTGTCTGCTATGCGATATATACCTCCGCGTTTCTCTACTCTCCCGTCATAAGATCACAG TATGCGGCCCGCCACCCTGCCTCAATCGAACCCACCGTTCGGTTCAACGATTTCGCATTTGCGGCACACGCGGTG GTCATGTGCATCATAATGTACTCGCAGTTCTGGCCTTTCATCTGGGGCTTCCACGTTTCCCGCTTCCAAAGAGTC AGTTGGTTAATGGCTGGAATATTCTGGGGGTGTGTCCTGTCTCCTCTGGTGGTTATCGTGGCCGTGTTGGCACAA AGTCCGGATGGAGGGTACGATCCTTCCACTTGGGCGTGGATTGACGTGATATACTCGTTTTCGTACGTCAAACTC CTGATCACCATTGTGAAATATATGCCCCAAGTGGCGTTGAACTACAAACGACAATCTACAGTAGGCTGGAACATT GGAACTATCCTTCTGGATATGGCTGGTGGTGTACTTTCAATGCTTCAACTGGTGCTTGACTCCAGCCTTCAAAGT GACTGGAGCGGTATTACCGGCAACCCAGTCAAGCTACTGCTGGGCAACGTTACAATCTTCTTCGATGCAATCTTC TGCATCCAGCACTACGTCTTATACCGAGATACTCCTGACCTGAAGAGAACATCTGGTCCGAGCGAGCAATCGCCC CTCTTGGATGGACAAGACGATACTGTGGGAGATCGAGTATGA
Gene	>Pro_DTO377G3_2\|g4329.t1 ATGACTCCTCAACTAGAGATATTTATTAGAGCTTTGTCCCGGTTTGTGAACTCCTATTCGCACCCGAATGCCACC GGGCATTATGAACATGACTGACTAATTTACCCTAGCTTTTTAGGATGGGCATAGTAAGTCTACGCGTTACTTCCG AGGCTATATCTTATATCTCATGTGACGTTTGGGTTGACGGCTAACTTGAACGAAGTATGCTCTGCTGGTCGGGGT CTTTTTATCCCCAGCCGATCACCAACTGGAGACGCAAGTCCACAGTCGGCTTATCCATTGATTTATCCACCATCA ACCCTCTGGGTTTTGTCTGCTATGCGATATATACCTCCGCGTTTCTCTACTCTCCCGTCATAAGATCACAGTATG CGGCCCGCCACCCTGCCTCAATCGAACCCACCGTTCGGTTCAACGATTTCGCATTTGCGGCACACGCGGTGGTCA TGTGCATCATAATGTACTCGCAGTTCTGGCCTTTCATCTGGGGCTTCCACGTTTCCCGCTTCCAAAGAGTCAGTT GGTTAATGGCTGGAATATTCTGGGGGTGTGTCCTGTCTCCTCTGGTGGTTATCGTGGCCGTGTTGGCACAAAGTC CGGATGGAGGGTACGATCCTTCCACTTGGGCGTGGATTGACGTGGTAGGTGAAAAAATCTACTTTTCTTCAATGA ACTCAACGGGGAAACTGTAAAACAAAGCTAATATCCTTCTAGATATACTCGTTTTCGTACGTCAAACTCCTGATC ACCATTGTGAAATATATGCCCCAAGTGGCGTTGAACTACAAACGACAATCTACAGTAGGCTGGAACATTGGAACT ATCCTTCTGGATATGGCTGGTGGTGTACTTTCAATGCTTCAACTGGTGCTTGACTCCAGCCTTCAAAGTGACTGG AGCGGTATTACCGGCAACCCAGTCAAGCTACTGCTGGGCAACGTTACAATCTTCTTCGATGCAATCTTCTGCATC CAGCACTACGTCTTATACCGAGATACTCCTGACCTGAAGAGAACATCTGGTCCGAGCGAGCAATCGCCCCTCTTG GATGGACAAGACGATACTGTGGGAGATCGAGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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