Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4329.t1
Gene name
Locationscaffold_08:712048..713134
Strand+
Gene length (bp)1086
Transcript length (bp)867
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04193 PQ-loop PQ loop repeat 4.0E-17 12 70
PF04193 PQ-loop PQ loop repeat 1.6E-16 168 224

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 50 72 22
3 95 117 22
4 124 146 22
5 161 183 22
6 196 218 22
7 238 257 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4329.t1
MTPQLEIFIRALSRFLGWAYMLCWSGSFYPQPITNWRRKSTVGLSIDLSTINPLGFVCYAIYTSAFLYSPVIRSQ
YAARHPASIEPTVRFNDFAFAAHAVVMCIIMYSQFWPFIWGFHVSRFQRVSWLMAGIFWGCVLSPLVVIVAVLAQ
SPDGGYDPSTWAWIDVIYSFSYVKLLITIVKYMPQVALNYKRQSTVGWNIGTILLDMAGGVLSMLQLVLDSSLQS
DWSGITGNPVKLLLGNVTIFFDAIFCIQHYVLYRDTPDLKRTSGPSEQSPLLDGQDDTVGDRV*
Coding >Pro_DTO377G3_2|g4329.t1
ATGACTCCTCAACTAGAGATATTTATTAGAGCTTTGTCCCGCTTTTTAGGATGGGCATATATGCTCTGCTGGTCG
GGGTCTTTTTATCCCCAGCCGATCACCAACTGGAGACGCAAGTCCACAGTCGGCTTATCCATTGATTTATCCACC
ATCAACCCTCTGGGTTTTGTCTGCTATGCGATATATACCTCCGCGTTTCTCTACTCTCCCGTCATAAGATCACAG
TATGCGGCCCGCCACCCTGCCTCAATCGAACCCACCGTTCGGTTCAACGATTTCGCATTTGCGGCACACGCGGTG
GTCATGTGCATCATAATGTACTCGCAGTTCTGGCCTTTCATCTGGGGCTTCCACGTTTCCCGCTTCCAAAGAGTC
AGTTGGTTAATGGCTGGAATATTCTGGGGGTGTGTCCTGTCTCCTCTGGTGGTTATCGTGGCCGTGTTGGCACAA
AGTCCGGATGGAGGGTACGATCCTTCCACTTGGGCGTGGATTGACGTGATATACTCGTTTTCGTACGTCAAACTC
CTGATCACCATTGTGAAATATATGCCCCAAGTGGCGTTGAACTACAAACGACAATCTACAGTAGGCTGGAACATT
GGAACTATCCTTCTGGATATGGCTGGTGGTGTACTTTCAATGCTTCAACTGGTGCTTGACTCCAGCCTTCAAAGT
GACTGGAGCGGTATTACCGGCAACCCAGTCAAGCTACTGCTGGGCAACGTTACAATCTTCTTCGATGCAATCTTC
TGCATCCAGCACTACGTCTTATACCGAGATACTCCTGACCTGAAGAGAACATCTGGTCCGAGCGAGCAATCGCCC
CTCTTGGATGGACAAGACGATACTGTGGGAGATCGAGTATGA
Transcript >Pro_DTO377G3_2|g4329.t1
ATGACTCCTCAACTAGAGATATTTATTAGAGCTTTGTCCCGCTTTTTAGGATGGGCATATATGCTCTGCTGGTCG
GGGTCTTTTTATCCCCAGCCGATCACCAACTGGAGACGCAAGTCCACAGTCGGCTTATCCATTGATTTATCCACC
ATCAACCCTCTGGGTTTTGTCTGCTATGCGATATATACCTCCGCGTTTCTCTACTCTCCCGTCATAAGATCACAG
TATGCGGCCCGCCACCCTGCCTCAATCGAACCCACCGTTCGGTTCAACGATTTCGCATTTGCGGCACACGCGGTG
GTCATGTGCATCATAATGTACTCGCAGTTCTGGCCTTTCATCTGGGGCTTCCACGTTTCCCGCTTCCAAAGAGTC
AGTTGGTTAATGGCTGGAATATTCTGGGGGTGTGTCCTGTCTCCTCTGGTGGTTATCGTGGCCGTGTTGGCACAA
AGTCCGGATGGAGGGTACGATCCTTCCACTTGGGCGTGGATTGACGTGATATACTCGTTTTCGTACGTCAAACTC
CTGATCACCATTGTGAAATATATGCCCCAAGTGGCGTTGAACTACAAACGACAATCTACAGTAGGCTGGAACATT
GGAACTATCCTTCTGGATATGGCTGGTGGTGTACTTTCAATGCTTCAACTGGTGCTTGACTCCAGCCTTCAAAGT
GACTGGAGCGGTATTACCGGCAACCCAGTCAAGCTACTGCTGGGCAACGTTACAATCTTCTTCGATGCAATCTTC
TGCATCCAGCACTACGTCTTATACCGAGATACTCCTGACCTGAAGAGAACATCTGGTCCGAGCGAGCAATCGCCC
CTCTTGGATGGACAAGACGATACTGTGGGAGATCGAGTATGA
Gene >Pro_DTO377G3_2|g4329.t1
ATGACTCCTCAACTAGAGATATTTATTAGAGCTTTGTCCCGGTTTGTGAACTCCTATTCGCACCCGAATGCCACC
GGGCATTATGAACATGACTGACTAATTTACCCTAGCTTTTTAGGATGGGCATAGTAAGTCTACGCGTTACTTCCG
AGGCTATATCTTATATCTCATGTGACGTTTGGGTTGACGGCTAACTTGAACGAAGTATGCTCTGCTGGTCGGGGT
CTTTTTATCCCCAGCCGATCACCAACTGGAGACGCAAGTCCACAGTCGGCTTATCCATTGATTTATCCACCATCA
ACCCTCTGGGTTTTGTCTGCTATGCGATATATACCTCCGCGTTTCTCTACTCTCCCGTCATAAGATCACAGTATG
CGGCCCGCCACCCTGCCTCAATCGAACCCACCGTTCGGTTCAACGATTTCGCATTTGCGGCACACGCGGTGGTCA
TGTGCATCATAATGTACTCGCAGTTCTGGCCTTTCATCTGGGGCTTCCACGTTTCCCGCTTCCAAAGAGTCAGTT
GGTTAATGGCTGGAATATTCTGGGGGTGTGTCCTGTCTCCTCTGGTGGTTATCGTGGCCGTGTTGGCACAAAGTC
CGGATGGAGGGTACGATCCTTCCACTTGGGCGTGGATTGACGTGGTAGGTGAAAAAATCTACTTTTCTTCAATGA
ACTCAACGGGGAAACTGTAAAACAAAGCTAATATCCTTCTAGATATACTCGTTTTCGTACGTCAAACTCCTGATC
ACCATTGTGAAATATATGCCCCAAGTGGCGTTGAACTACAAACGACAATCTACAGTAGGCTGGAACATTGGAACT
ATCCTTCTGGATATGGCTGGTGGTGTACTTTCAATGCTTCAACTGGTGCTTGACTCCAGCCTTCAAAGTGACTGG
AGCGGTATTACCGGCAACCCAGTCAAGCTACTGCTGGGCAACGTTACAATCTTCTTCGATGCAATCTTCTGCATC
CAGCACTACGTCTTATACCGAGATACTCCTGACCTGAAGAGAACATCTGGTCCGAGCGAGCAATCGCCCCTCTTG
GATGGACAAGACGATACTGTGGGAGATCGAGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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