Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4322.t1
Gene name
Locationscaffold_08:692251..693199
Strand+
Gene length (bp)948
Transcript length (bp)948
Coding sequence length (bp)948
Protein length (aa) 316

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 3.0E-14 7 52
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 9.8E-09 62 101
PF13921 Myb_DNA-bind_6 Myb-like DNA-binding domain 1.5E-13 10 66

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4322.t1
MPASHRRGPWVPEEDQLLTQLVCEQGPNNWVRISQHMHYRSPKQCRERFHQNLKPSLNRDPISPDEGLMIERMVN
EMGKRWAEIARRLGNRSDNAVKNWWNGSMNRKKRGLSTPTTSRTYSGRIEAPYTRASAMSPSRSRFSSSSRPSWT
ESIESAISEQYSHSRRESMASSTRHLSPIYTLPSINRPIETPLTSPAFSEASHSTSCEPPSMVSDHNSVCSSSPR
TFPSPQLLPLPVDLRSQYEMRRPSVHVVEDSPSYPARSLESLSEIASTQRWIGHQPTLASWHQPIDLPKSWISRS
EPTRDTRMGLDNLLN*
Coding >Pro_DTO377G3_2|g4322.t1
ATGCCTGCTTCACACCGTCGTGGTCCTTGGGTCCCAGAGGAAGACCAACTCCTCACCCAACTAGTCTGCGAACAA
GGCCCCAACAACTGGGTTCGCATCTCTCAACACATGCACTACCGTTCGCCCAAGCAATGTCGCGAACGTTTTCAC
CAAAATCTCAAGCCCTCGCTAAACAGAGACCCCATCTCCCCCGACGAGGGCCTGATGATCGAGCGCATGGTCAAT
GAAATGGGAAAGCGCTGGGCTGAGATAGCCCGCCGCCTCGGCAATCGCAGCGACAACGCAGTCAAGAACTGGTGG
AATGGCAGCATGAACCGCAAGAAGCGCGGCCTGTCCACTCCCACCACTTCCCGCACTTATTCAGGCCGCATCGAG
GCACCCTACACCCGCGCCTCGGCGATGAGCCCATCGCGCTCTCGCTTCTCTTCTTCCTCTCGCCCCTCATGGACA
GAGTCCATCGAATCCGCTATCTCTGAACAATACTCCCACTCGCGCCGAGAATCCATGGCTTCTTCCACCCGCCAT
CTCTCCCCCATCTACACACTCCCCTCCATCAACCGACCAATCGAGACTCCCCTCACCTCGCCTGCTTTCTCAGAG
GCTTCACACTCCACCTCTTGCGAGCCGCCTTCTATGGTCTCAGACCACAATTCCGTCTGTTCTTCTTCGCCCCGC
ACTTTCCCCTCTCCGCAACTCCTGCCCTTGCCCGTCGACCTGCGCTCGCAGTACGAGATGCGGAGGCCCAGTGTC
CACGTTGTCGAGGACTCGCCCAGTTACCCGGCTCGCTCGCTCGAGTCTCTGTCAGAGATCGCCTCCACGCAGCGC
TGGATTGGCCACCAGCCCACCCTAGCCTCATGGCACCAGCCTATAGACTTGCCCAAGTCTTGGATCTCCAGGTCT
GAGCCTACTCGTGACACTCGAATGGGGTTGGACAATTTGCTCAATTGA
Transcript >Pro_DTO377G3_2|g4322.t1
ATGCCTGCTTCACACCGTCGTGGTCCTTGGGTCCCAGAGGAAGACCAACTCCTCACCCAACTAGTCTGCGAACAA
GGCCCCAACAACTGGGTTCGCATCTCTCAACACATGCACTACCGTTCGCCCAAGCAATGTCGCGAACGTTTTCAC
CAAAATCTCAAGCCCTCGCTAAACAGAGACCCCATCTCCCCCGACGAGGGCCTGATGATCGAGCGCATGGTCAAT
GAAATGGGAAAGCGCTGGGCTGAGATAGCCCGCCGCCTCGGCAATCGCAGCGACAACGCAGTCAAGAACTGGTGG
AATGGCAGCATGAACCGCAAGAAGCGCGGCCTGTCCACTCCCACCACTTCCCGCACTTATTCAGGCCGCATCGAG
GCACCCTACACCCGCGCCTCGGCGATGAGCCCATCGCGCTCTCGCTTCTCTTCTTCCTCTCGCCCCTCATGGACA
GAGTCCATCGAATCCGCTATCTCTGAACAATACTCCCACTCGCGCCGAGAATCCATGGCTTCTTCCACCCGCCAT
CTCTCCCCCATCTACACACTCCCCTCCATCAACCGACCAATCGAGACTCCCCTCACCTCGCCTGCTTTCTCAGAG
GCTTCACACTCCACCTCTTGCGAGCCGCCTTCTATGGTCTCAGACCACAATTCCGTCTGTTCTTCTTCGCCCCGC
ACTTTCCCCTCTCCGCAACTCCTGCCCTTGCCCGTCGACCTGCGCTCGCAGTACGAGATGCGGAGGCCCAGTGTC
CACGTTGTCGAGGACTCGCCCAGTTACCCGGCTCGCTCGCTCGAGTCTCTGTCAGAGATCGCCTCCACGCAGCGC
TGGATTGGCCACCAGCCCACCCTAGCCTCATGGCACCAGCCTATAGACTTGCCCAAGTCTTGGATCTCCAGGTCT
GAGCCTACTCGTGACACTCGAATGGGGTTGGACAATTTGCTCAATTGA
Gene >Pro_DTO377G3_2|g4322.t1
ATGCCTGCTTCACACCGTCGTGGTCCTTGGGTCCCAGAGGAAGACCAACTCCTCACCCAACTAGTCTGCGAACAA
GGCCCCAACAACTGGGTTCGCATCTCTCAACACATGCACTACCGTTCGCCCAAGCAATGTCGCGAACGTTTTCAC
CAAAATCTCAAGCCCTCGCTAAACAGAGACCCCATCTCCCCCGACGAGGGCCTGATGATCGAGCGCATGGTCAAT
GAAATGGGAAAGCGCTGGGCTGAGATAGCCCGCCGCCTCGGCAATCGCAGCGACAACGCAGTCAAGAACTGGTGG
AATGGCAGCATGAACCGCAAGAAGCGCGGCCTGTCCACTCCCACCACTTCCCGCACTTATTCAGGCCGCATCGAG
GCACCCTACACCCGCGCCTCGGCGATGAGCCCATCGCGCTCTCGCTTCTCTTCTTCCTCTCGCCCCTCATGGACA
GAGTCCATCGAATCCGCTATCTCTGAACAATACTCCCACTCGCGCCGAGAATCCATGGCTTCTTCCACCCGCCAT
CTCTCCCCCATCTACACACTCCCCTCCATCAACCGACCAATCGAGACTCCCCTCACCTCGCCTGCTTTCTCAGAG
GCTTCACACTCCACCTCTTGCGAGCCGCCTTCTATGGTCTCAGACCACAATTCCGTCTGTTCTTCTTCGCCCCGC
ACTTTCCCCTCTCCGCAACTCCTGCCCTTGCCCGTCGACCTGCGCTCGCAGTACGAGATGCGGAGGCCCAGTGTC
CACGTTGTCGAGGACTCGCCCAGTTACCCGGCTCGCTCGCTCGAGTCTCTGTCAGAGATCGCCTCCACGCAGCGC
TGGATTGGCCACCAGCCCACCCTAGCCTCATGGCACCAGCCTATAGACTTGCCCAAGTCTTGGATCTCCAGGTCT
GAGCCTACTCGTGACACTCGAATGGGGTTGGACAATTTGCTCAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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