Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280

General Properties

Protein ID	Pro_DTO377G3_2|g4319.t1
Gene name
Location	scaffold_08:673685..676323
Strand	+
Gene length (bp)	2638
Transcript length (bp)	2310
Coding sequence length (bp)	2310
Protein length (aa)	770

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04811	Sec23_trunk	Sec23/Sec24 trunk domain	5.0E-80	127	392
PF08033	Sec23_BS	Sec23/Sec24 beta-sandwich domain	1.6E-29	403	507
PF04815	Sec23_helical	Sec23/Sec24 helical domain	4.3E-24	521	619
PF04810	zf-Sec23_Sec24	Sec23/Sec24 zinc finger	1.8E-15	60	99
PF00626	Gelsolin	Gelsolin repeat	7.0E-12	635	722

GO

GO Term	Description	Terminal node
GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	Yes
GO:0008270	zinc ion binding	Yes
GO:0030127	COPII vesicle coat	Yes
GO:0006886	intracellular protein transport	Yes
GO:0008104	protein localization	No
GO:0044464	cell part	No
GO:0048193	Golgi vesicle transport	No
GO:0046872	metal ion binding	No
GO:0045184	establishment of protein localization	No
GO:0044446	intracellular organelle part	No
GO:0051649	establishment of localization in cell	No
GO:0044444	cytoplasmic part	No
GO:0046907	intracellular transport	No
GO:0051234	establishment of localization	No
GO:0030120	vesicle coat	No
GO:0051179	localization	No
GO:0051641	cellular localization	No
GO:0071702	organic substance transport	No
GO:0042886	amide transport	No
GO:0016192	vesicle-mediated transport	No
GO:0098796	membrane protein complex	No
GO:0003674	molecular_function	No
GO:0044433	cytoplasmic vesicle part	No
GO:0044425	membrane part	No
GO:0044424	intracellular part	No
GO:0043169	cation binding	No
GO:0005488	binding	No
GO:0015031	protein transport	No
GO:0044422	organelle part	No
GO:0043167	ion binding	No
GO:0071705	nitrogen compound transport	No
GO:0008150	biological_process	No
GO:0030117	membrane coat	No
GO:0032991	protein-containing complex	No
GO:0006810	transport	No
GO:0005575	cellular_component	No
GO:0033036	macromolecule localization	No
GO:0015833	peptide transport	No
GO:0046914	transition metal ion binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g4319.t1 MDYEALKDQWSDVEDRDGLRLSWNTFPSTRMEASRLVVPIAAVYTPLKEKPDAPLLQYEPVTCKQPCRAVLNPYA TVDVRARVWICPFCLSRNPLPPHYKDITENTIPPELHPQSTTIEYQLARPAPAPPIFVFVVDTCQEDDSLQAVKD SLIMSLSLLPPNALVGLITFGTMAQVHELGYIECAKSYVFRGNKEYNAKQVQEMLGLSGGVRPGVPQQQPARPPL GPAARFLMPVQQAEFQITNVLEQLQRDPWPVANDKRPLRCTGVALSVAVGLLESSFQNAGGRIMTFTSGAATEGP GHVVSPELKEPIRSHHDIERDNIKYYKKAVKFYDALAKRAANNGHIVDIFAGCLDQVGLLEMKNLSNFTGGYMLL TDSFTSSQFKQSFVRVFDKDAADNLLMGFNASLEVLTTKELKVTGLIGHAISLNKKSSSVGETECGIGNTCAWKM CGMDPSSSYGIYFEIANQGGPAAVQPGPQRGMIQFLTYYQHSSGHYHLRVTTTARPLSGPAGDPTLAQSFDQEAA AVLMARIAVFKAEVDDGPDVLRWVDRMLIRLCSRFADYRKDDPTSFRLEKNFTLYPQFMFHLRRSQFLQVFNNSP DETAFYRHVLNHEDTGDSLVMIQPTLDSYSLEQEGAQPVLLDSASIQPAHILLLDTFFHILIFNGETIAEWRKAG YHEQEGYENLKLLLEQPKEDARDLISDRFPLPRFIVCDAGGSQARFLLSKLNPSTTHTTGGYGGGVSSQTIFTDD VSLQTFMDHLMKLAVSGTS*
Coding	>Pro_DTO377G3_2|g4319.t1 ATGGATTACGAAGCGCTCAAGGATCAATGGAGCGATGTGGAGGACCGCGATGGCCTCAGGCTCAGTTGGAACACT TTCCCGAGCACTCGTATGGAAGCGTCCCGCTTGGTCGTTCCCATCGCCGCCGTGTACACACCGTTGAAGGAAAAG CCCGACGCTCCCTTGCTACAATATGAGCCCGTTACTTGCAAGCAGCCCTGCCGAGCTGTGCTCAACCCATATGCC ACTGTCGATGTCCGCGCACGAGTCTGGATCTGCCCCTTCTGTCTCTCGCGCAACCCTCTCCCTCCGCATTACAAG GATATTACAGAGAACACGATACCCCCAGAGCTCCACCCCCAGAGCACGACAATCGAGTACCAATTGGCACGGCCA GCCCCCGCTCCCCCCATTTTCGTCTTTGTCGTCGATACCTGCCAGGAGGATGATAGTCTGCAGGCTGTGAAGGAT TCCCTCATCATGAGCTTGTCTCTTCTGCCGCCCAATGCGCTGGTTGGTCTGATTACGTTCGGTACAATGGCCCAA GTTCACGAGCTCGGCTACATCGAATGCGCCAAGTCATACGTGTTCAGAGGCAACAAGGAATACAACGCCAAGCAG GTTCAGGAGATGCTGGGCCTATCCGGTGGCGTGCGCCCCGGTGTTCCCCAACAACAGCCAGCTCGTCCTCCTCTT GGCCCGGCTGCGCGCTTCCTCATGCCCGTTCAACAGGCTGAGTTCCAGATCACCAATGTCCTCGAACAATTGCAG CGCGATCCCTGGCCAGTGGCCAATGACAAGCGTCCCCTGCGCTGCACCGGTGTTGCCCTGAGCGTTGCCGTCGGT CTGCTTGAGAGTTCCTTCCAGAACGCCGGAGGCCGCATCATGACCTTTACCAGTGGTGCAGCAACTGAGGGCCCT GGCCACGTTGTTTCGCCTGAACTGAAGGAGCCTATTCGTTCGCACCACGATATTGAACGGGACAATATCAAATAC TACAAGAAGGCTGTTAAGTTCTATGATGCCCTCGCTAAGCGCGCTGCCAACAATGGCCATATTGTCGATATTTTC GCCGGCTGTCTTGATCAAGTCGGTTTGCTGGAAATGAAGAACCTCTCCAACTTTACTGGCGGTTACATGCTTCTC ACCGATAGCTTCACATCCTCACAGTTCAAGCAATCGTTCGTGCGCGTGTTCGACAAGGACGCCGCCGATAACCTC TTGATGGGCTTCAATGCATCCCTCGAGGTGCTCACGACCAAGGAACTTAAGGTTACTGGTCTGATTGGGCATGCC ATCTCGCTGAACAAGAAGTCAAGCTCTGTTGGCGAGACAGAATGCGGTATCGGTAACACCTGTGCATGGAAGATG TGTGGAATGGACCCATCCTCTAGCTACGGTATTTACTTTGAGATTGCCAACCAGGGCGGCCCAGCTGCTGTTCAG CCTGGTCCTCAACGGGGTATGATTCAGTTTTTGACATACTACCAGCATTCCTCTGGGCATTATCACCTGCGAGTG ACCACCACTGCCCGCCCCTTGAGCGGACCTGCAGGTGACCCAACCCTGGCACAATCCTTCGACCAAGAGGCTGCC GCTGTCCTCATGGCCCGTATTGCAGTGTTCAAGGCGGAGGTTGATGACGGTCCAGACGTCCTGCGCTGGGTTGAT CGTATGCTGATCAGACTCTGCTCCCGATTCGCTGACTACCGGAAAGATGACCCGACATCATTCCGATTGGAAAAG AACTTCACCTTGTACCCTCAGTTCATGTTCCATCTCCGCCGAAGTCAGTTCTTGCAGGTTTTCAACAACTCGCCC GATGAGACTGCTTTCTACCGCCACGTTTTGAACCACGAGGATACTGGTGACTCTCTTGTCATGATCCAGCCCACT CTTGATTCGTACTCTCTGGAGCAAGAGGGTGCTCAGCCAGTGCTGCTGGACTCCGCTTCTATCCAGCCCGCCCAC ATTCTCCTCCTTGATACCTTCTTCCACATCCTGATCTTCAACGGCGAGACGATTGCCGAATGGAGGAAAGCCGGA TACCATGAACAAGAGGGATACGAGAATCTCAAGTTGCTTCTTGAGCAGCCTAAAGAGGATGCTAGGGATCTTATT TCCGACCGTTTCCCCCTGCCGCGTTTCATCGTCTGCGATGCCGGTGGTTCCCAGGCGCGTTTCTTGCTGTCCAAG TTGAACCCGTCGACCACCCATACCACAGGTGGCTACGGTGGCGGTGTCTCATCGCAGACCATCTTCACTGATGAC GTATCGCTCCAGACATTCATGGACCACCTGATGAAACTTGCTGTATCTGGAACCAGCTAG
Transcript	>Pro_DTO377G3_2|g4319.t1 ATGGATTACGAAGCGCTCAAGGATCAATGGAGCGATGTGGAGGACCGCGATGGCCTCAGGCTCAGTTGGAACACT TTCCCGAGCACTCGTATGGAAGCGTCCCGCTTGGTCGTTCCCATCGCCGCCGTGTACACACCGTTGAAGGAAAAG CCCGACGCTCCCTTGCTACAATATGAGCCCGTTACTTGCAAGCAGCCCTGCCGAGCTGTGCTCAACCCATATGCC ACTGTCGATGTCCGCGCACGAGTCTGGATCTGCCCCTTCTGTCTCTCGCGCAACCCTCTCCCTCCGCATTACAAG GATATTACAGAGAACACGATACCCCCAGAGCTCCACCCCCAGAGCACGACAATCGAGTACCAATTGGCACGGCCA GCCCCCGCTCCCCCCATTTTCGTCTTTGTCGTCGATACCTGCCAGGAGGATGATAGTCTGCAGGCTGTGAAGGAT TCCCTCATCATGAGCTTGTCTCTTCTGCCGCCCAATGCGCTGGTTGGTCTGATTACGTTCGGTACAATGGCCCAA GTTCACGAGCTCGGCTACATCGAATGCGCCAAGTCATACGTGTTCAGAGGCAACAAGGAATACAACGCCAAGCAG GTTCAGGAGATGCTGGGCCTATCCGGTGGCGTGCGCCCCGGTGTTCCCCAACAACAGCCAGCTCGTCCTCCTCTT GGCCCGGCTGCGCGCTTCCTCATGCCCGTTCAACAGGCTGAGTTCCAGATCACCAATGTCCTCGAACAATTGCAG CGCGATCCCTGGCCAGTGGCCAATGACAAGCGTCCCCTGCGCTGCACCGGTGTTGCCCTGAGCGTTGCCGTCGGT CTGCTTGAGAGTTCCTTCCAGAACGCCGGAGGCCGCATCATGACCTTTACCAGTGGTGCAGCAACTGAGGGCCCT GGCCACGTTGTTTCGCCTGAACTGAAGGAGCCTATTCGTTCGCACCACGATATTGAACGGGACAATATCAAATAC TACAAGAAGGCTGTTAAGTTCTATGATGCCCTCGCTAAGCGCGCTGCCAACAATGGCCATATTGTCGATATTTTC GCCGGCTGTCTTGATCAAGTCGGTTTGCTGGAAATGAAGAACCTCTCCAACTTTACTGGCGGTTACATGCTTCTC ACCGATAGCTTCACATCCTCACAGTTCAAGCAATCGTTCGTGCGCGTGTTCGACAAGGACGCCGCCGATAACCTC TTGATGGGCTTCAATGCATCCCTCGAGGTGCTCACGACCAAGGAACTTAAGGTTACTGGTCTGATTGGGCATGCC ATCTCGCTGAACAAGAAGTCAAGCTCTGTTGGCGAGACAGAATGCGGTATCGGTAACACCTGTGCATGGAAGATG TGTGGAATGGACCCATCCTCTAGCTACGGTATTTACTTTGAGATTGCCAACCAGGGCGGCCCAGCTGCTGTTCAG CCTGGTCCTCAACGGGGTATGATTCAGTTTTTGACATACTACCAGCATTCCTCTGGGCATTATCACCTGCGAGTG ACCACCACTGCCCGCCCCTTGAGCGGACCTGCAGGTGACCCAACCCTGGCACAATCCTTCGACCAAGAGGCTGCC GCTGTCCTCATGGCCCGTATTGCAGTGTTCAAGGCGGAGGTTGATGACGGTCCAGACGTCCTGCGCTGGGTTGAT CGTATGCTGATCAGACTCTGCTCCCGATTCGCTGACTACCGGAAAGATGACCCGACATCATTCCGATTGGAAAAG AACTTCACCTTGTACCCTCAGTTCATGTTCCATCTCCGCCGAAGTCAGTTCTTGCAGGTTTTCAACAACTCGCCC GATGAGACTGCTTTCTACCGCCACGTTTTGAACCACGAGGATACTGGTGACTCTCTTGTCATGATCCAGCCCACT CTTGATTCGTACTCTCTGGAGCAAGAGGGTGCTCAGCCAGTGCTGCTGGACTCCGCTTCTATCCAGCCCGCCCAC ATTCTCCTCCTTGATACCTTCTTCCACATCCTGATCTTCAACGGCGAGACGATTGCCGAATGGAGGAAAGCCGGA TACCATGAACAAGAGGGATACGAGAATCTCAAGTTGCTTCTTGAGCAGCCTAAAGAGGATGCTAGGGATCTTATT TCCGACCGTTTCCCCCTGCCGCGTTTCATCGTCTGCGATGCCGGTGGTTCCCAGGCGCGTTTCTTGCTGTCCAAG TTGAACCCGTCGACCACCCATACCACAGGTGGCTACGGTGGCGGTGTCTCATCGCAGACCATCTTCACTGATGAC GTATCGCTCCAGACATTCATGGACCACCTGATGAAACTTGCTGTATCTGGAACCAGCTAG
Gene	>Pro_DTO377G3_2|g4319.t1 ATGGATTACGAAGCGCTCAAGGATCAATGGAGCGATGTGGAGGACCGCGATGGCCTCAGGCTCAGTTGGAACACT TTCCCGAGCACTCGTATGGTTCGTGATAGTGGCCCTCTCTGACCTTCACCGCATCATCCGCTGATGCTTGATATA GGAAGCGTCCCGCTTGGTCGTTCCCATCGCCGCCGTGTACACACCGTTGAAGGAAAAGCCCGACGCTCCCTTGCT ACAATATGAGCCCGTTACTTGCAAGCAGCCCTGCCGAGCTGTGCTCAACCCATATGCGTACGTGACATGTCGATC TGATATACCTCAATGAGTAGATGGACTGACGCTTGGACAGCACTGTCGATGTCCGCGCACGAGTCTGGATCTGCC CCTTCTGTCTCTCGCGCAACCCTCTCCCTCCGCATTACAAGGATATTACAGAGAACACGATACCCCCAGAGCTCC ACCCCCAGAGCACGACAATCGAGTACCAATTGGCACGGCCAGCCCCCGCTCCCCCCATTTTCGTCTTTGTCGTCG ATACCTGCCAGGAGGATGATAGTCTGCAGGCTGTGAAGGATTCCCTCATCATGAGCTTGTCTCTTCTGCCGCCCA ATGCGCTGGTTGGTCTGATTACGTTCGGTACAATGGTAGGCAATGATGATCTTCGCAACGCAGGTGACATGTTGT TGACCTTGATATATAGGCCCAAGTTCACGAGCTCGGCTACATCGAATGCGCCAAGTCATACGTGTTCAGAGGCAA CAAGGAATACAACGCCAAGCAGGTTCAGGAGATGCTGGGCCTATCCGGTGGCGTGCGCCCCGGTGTTCCCCAACA ACAGCCAGCTCGTCCTCCTCTTGGCCCGGCTGCGCGCTTCCTCATGCCCGTTCAACAGGCTGAGTTCCAGATCAC CAATGTCCTCGAACAATTGCAGCGCGATCCCTGGCCAGTGGCCAATGACAAGCGTCCCCTGCGCTGCACCGGTGT TGCCCTGAGCGTTGCCGTCGGTCTGCTTGAGAGTTCCTTCCAGAACGCCGGAGGCCGCATCATGACCTTTACCAG TGGTGCAGCAACTGAGGGCCCTGGCCACGTTGTTTCGCCTGAACTGAAGGAGCCTATTCGTTCGCACCACGATAT TGAACGGGACAATATCAAATACTACAAGAAGGCTGTTAAGGTCGGTTCTCAACGCGTGAGTGTATTGGATTTTGC TAATTTGCTCCTAGTTCTATGATGCCCTCGCTAAGCGCGCTGCCAACAATGGCCATATTGTCGATATTTTCGCCG GCTGTCTTGATCAAGTCGGTTTGCTGGAAATGAAGAACCTCTCCAACTTTACTGGCGGTTACATGCTTCTCACCG ATAGCTTCACATCCTCACAGTTCAAGCAATCGTTCGTGCGCGTGTTCGACAAGGACGCCGCCGATAACCTCTTGA TGGGCTTCAATGCATCCCTCGAGGTGCTCACGACCAAGGAACTTAAGGTTACTGGTCTGATTGGGCATGCCATCT CGCTGAACAAGAAGTCAAGCTCTGTTGGCGAGACAGAATGCGGTATCGGTAACACCTGTGCATGGAAGATGTGTG GAATGGACCCATCCTCTAGCTACGGTATTTACTTTGAGATTGCCAACCAGGGCGGCCCAGCTGCTGTTCAGCCTG GTCCTCAACGGGGTATGATTCAGTTTTTGACATACTACCAGCATTCCTCTGGGCATTATCACCTGCGAGTGACCA CCACTGCCCGCCCCTTGAGCGGACCTGCAGGTGACCCAACCCTGGCACAATCCTTCGACCAAGAGGCTGCCGCTG TCCTCATGGCCCGTATTGCAGTGTTCAAGGCGGAGGTTGATGACGGTCCAGACGTCCTGCGCTGGGTTGATCGTA TGCTGATCAGACTCTGCTCCCGATTCGCTGACTACCGGAAAGATGACCCGACATCATTCCGATTGGAAAAGAACT TCACCTTGTACCCTCAGTTCATGTTCCATCTCCGCCGAAGTCAGTTCTTGCAGGTTTTCAACAACTCGCCCGATG AGACTGCTTTCTACCGCCACGTTTTGAACCACGAGGATACTGGTGACTCTCTTGTCATGATCCAGCCCACTCTTG ATTCGTACTCTCTGGAGCAAGAGGGTGCTCAGCCAGTGCTGCTGGACTCCGCTTCTATCCAGCCCGCCCACATTC TCCTCCTTGATACCTTCTTCCACATCCTGATCTTCAACGGCGAGACGATTGCCGAATGGAGGAAAGCCGGATACC ATGAACAAGAGGGATACGAGAATCTCAAGTTGCTTCTTGAGCAGCCTAAAGAGGATGCTAGGGTTCGTTCCCACC TTTCTTGTTGATCTTTAACCTATTTACTGACTGTGTATTATAGGATCTTATTTCCGACCGTTTCCCCCTGCCGCG TTTCATCGTCTGCGATGCCGGTGGTTCCCAGGCGCGTTTCTTGCTGTCCAAGTTGAACCCGTCGACCACCCATAC CACAGGTGGCTACGGTGGCGGTGTCTCATCGCAGACCATCTTCACTGATGACGTATCGCTCCAGACATTCATGGA CCACCTGATGAAGTGAGTTTTCCTGCAATTCTGATGGATCCTTCCATGCTAATTTTATTCTAGACTTGCTGTATC TGGAACCAGCTAG