Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4299.t1
Gene name
Locationscaffold_08:617231..620180
Strand+
Gene length (bp)2949
Transcript length (bp)2616
Coding sequence length (bp)2616
Protein length (aa) 872

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01068 DNA_ligase_A_M ATP dependent DNA ligase domain 1.5E-56 469 692
PF04675 DNA_ligase_A_N DNA ligase N terminus 6.5E-44 207 401
PF04679 DNA_ligase_A_C ATP dependent DNA ligase C terminal region 9.1E-26 717 834

GO

GO Term Description Terminal node
GO:0006310 DNA recombination Yes
GO:0005524 ATP binding Yes
GO:0003910 DNA ligase (ATP) activity Yes
GO:0003677 DNA binding Yes
GO:0006281 DNA repair Yes
GO:0006974 cellular response to DNA damage stimulus No
GO:0017076 purine nucleotide binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0009987 cellular process No
GO:0043170 macromolecule metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0043168 anion binding No
GO:0044238 primary metabolic process No
GO:0032559 adenyl ribonucleotide binding No
GO:0003824 catalytic activity No
GO:0006950 response to stress No
GO:0033554 cellular response to stress No
GO:0044260 cellular macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0032553 ribonucleotide binding No
GO:0071704 organic substance metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0036094 small molecule binding No
GO:0044237 cellular metabolic process No
GO:0050896 response to stimulus No
GO:0005488 binding No
GO:0016886 ligase activity, forming phosphoric ester bonds No
GO:0006259 DNA metabolic process No
GO:0003909 DNA ligase activity No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003676 nucleic acid binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0043167 ion binding No
GO:1901265 nucleoside phosphate binding No
GO:0000166 nucleotide binding No
GO:0003674 molecular_function No
GO:0008144 drug binding No
GO:0051716 cellular response to stimulus No
GO:0008150 biological_process No
GO:0140097 catalytic activity, acting on DNA No
GO:0016874 ligase activity No
GO:0008152 metabolic process No
GO:0030554 adenyl nucleotide binding No
GO:0097367 carbohydrate derivative binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4299.t1
MADDKSRKQATLGYVRDGQQTIGRFFGSGANQPPKKQTTLAFGGKRQAASSNAADTELTDNTNGFKVEDASNSAP
TAEPTKGVKREKSPEAEESDGSDIQPVSKRRRKASSKSSPAAKKQSASPEKPESIKPKVESPSPKPAMKKLSDVT
PEEKSPSVVEDEDPLESEDEDDLKPELTRKSIEKFQAKIQASGKDPYPDWEAGTPVPYAALCTTFSLVEMTRKRL
EITDHCSLFLRQVLRLTPADFLPTVQLMINKLAADYAGVELGIGESLIMKAIGECTGRSLAVIKADQREIGDLGL
VAAKSRSNQPTMFKPKPLTVRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADADTAGKGGKGVDITKDKGGPS
EAKFIVRFLEGKLRLGLAEKTVLVAVSRAVQIHEAESTGNKIPSTEQMAAGENIFKTVYSELPAYEVIIPAVLEH
GLFKLPEVCKLSPGIPIKPMLAKPTKSITEVLDRFEGKEFTCEYKYDGERAQIHFVSPDSMHQYPGALETLQKDS
KGLSSIFSRNSEDLSKKYPDVLGKLGTWVKADVKSFVLDCETVAWDTEAKKVLPFQQLMTRKRKDVKAEDVKVKV
CVYAFDLLFFNGEPCVKKSLRERRELMHECFQPIEGEFQFAQYGNSNVLDEIQELLEASVKASCEGLMVKMLDTA
ESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNPNNDTYETICNIGTGFSEVL
LEELHQTLVPLVIDRPKPFYTHSAVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFQGTTGGGKGVSLRFP
RYMKSRDDKKPDEATTTRAVAEMYRKQEAVTKDTTSKGGVDDDFEY*
Coding >Pro_DTO377G3_2|g4299.t1
ATGGCCGATGACAAGAGCAGGAAACAGGCTACCCTGGGGTATGTACGGGATGGCCAGCAAACGATTGGGAGGTTC
TTCGGTTCGGGCGCCAACCAACCGCCGAAAAAGCAGACCACATTAGCTTTTGGCGGAAAGAGACAAGCAGCAAGC
AGTAATGCCGCTGATACTGAGCTCACGGATAACACCAATGGATTTAAGGTGGAGGACGCTAGCAATTCAGCACCA
ACTGCAGAGCCAACGAAGGGCGTGAAGCGGGAAAAAAGCCCCGAGGCGGAAGAAAGCGATGGTTCTGATATTCAG
CCTGTCTCTAAGAGGCGACGAAAGGCTTCGTCGAAGAGCTCTCCCGCTGCTAAGAAACAATCGGCATCCCCGGAG
AAGCCTGAGTCTATAAAGCCAAAAGTTGAATCGCCATCACCAAAACCAGCAATGAAAAAGCTCTCCGATGTTACT
CCTGAAGAGAAGTCACCTTCAGTAGTAGAAGACGAGGACCCACTGGAAAGCGAAGATGAAGATGACCTCAAGCCG
GAGCTCACGAGGAAATCAATCGAAAAGTTCCAAGCAAAAATACAAGCCAGTGGTAAAGATCCATACCCAGACTGG
GAAGCAGGCACTCCTGTTCCCTATGCTGCGTTATGTACCACATTCTCTCTAGTAGAGATGACCAGGAAGCGTTTG
GAAATCACAGACCATTGTTCTCTTTTCCTTCGCCAGGTTCTTCGCCTGACCCCTGCCGATTTCCTACCCACTGTT
CAACTGATGATTAATAAACTTGCTGCCGATTATGCCGGAGTTGAACTGGGCATCGGGGAGTCACTCATCATGAAA
GCTATTGGTGAATGTACCGGCCGCAGTCTTGCCGTCATCAAAGCCGATCAACGGGAAATCGGAGACCTGGGACTG
GTCGCTGCCAAAAGTCGGTCAAACCAGCCTACCATGTTCAAGCCCAAGCCTTTGACTGTTCGGGGTGTACACGAA
GGTCTTCTTGGAATTGCCAAGGTCCAGGGTCATGGATCTCAGGACAAAAAGATTTCAGGCATCAAGAAACTGCTG
TCTGCAGCCGATGCCGACACTGCTGGCAAGGGAGGCAAAGGGGTGGATATCACCAAGGACAAGGGTGGTCCCAGC
GAAGCCAAATTTATCGTTCGCTTTTTAGAAGGTAAACTGAGATTGGGACTCGCAGAGAAGACAGTTCTTGTCGCT
GTCTCTCGGGCAGTCCAGATTCACGAGGCTGAGTCAACCGGAAATAAAATTCCTTCGACAGAGCAAATGGCCGCC
GGTGAAAACATCTTCAAAACTGTTTACAGCGAGCTTCCTGCCTATGAAGTGATCATTCCTGCCGTTCTTGAGCAT
GGTCTCTTTAAGTTGCCTGAAGTGTGCAAGCTTTCTCCCGGAATTCCTATCAAGCCTATGCTTGCCAAACCGACA
AAGTCTATCACCGAGGTCCTTGACCGTTTTGAAGGGAAGGAATTCACTTGCGAATACAAGTACGATGGAGAAAGA
GCACAAATCCATTTTGTATCTCCAGATTCTATGCACCAGTATCCTGGAGCCTTGGAAACATTGCAGAAAGACAGC
AAGGGGCTGTCCTCAATATTTTCCCGCAACTCGGAAGATCTTTCAAAGAAGTATCCCGATGTTTTAGGCAAGCTT
GGCACTTGGGTCAAAGCTGACGTTAAGAGCTTTGTTCTGGATTGCGAGACTGTCGCATGGGATACCGAAGCCAAA
AAGGTTCTTCCATTCCAGCAACTGATGACCCGCAAGCGCAAGGATGTCAAAGCGGAAGATGTCAAGGTCAAGGTC
TGCGTGTACGCCTTTGATCTGCTTTTCTTCAATGGAGAGCCCTGCGTCAAGAAGTCTCTACGAGAAAGGCGAGAG
CTTATGCATGAGTGCTTCCAACCGATTGAGGGGGAGTTCCAGTTTGCCCAGTATGGCAACTCTAATGTTCTCGAT
GAGATCCAAGAATTGCTCGAGGCTAGTGTTAAGGCATCTTGTGAAGGTCTTATGGTGAAGATGCTAGACACAGCA
GAGAGTGGCTACGAGCCAAGCAAGCGGAGCCGCAACTGGCTGAAGGTCAAAAAAGATTACCTCGCCGGTGTTGGT
GACTCTCTTGATCTTGTTGTACTCGGGGCCTACTATGGTCGTGGAAAGCGTACTTCGGTTTACGGTGCTTTCCTT
CTCGCTGCCTACAACCCCAACAACGACACATATGAGACTATCTGTAACATCGGCACTGGCTTCTCTGAGGTGCTA
CTTGAAGAGCTACATCAGACGTTAGTTCCTCTGGTAATTGACCGCCCAAAGCCATTTTACACTCACTCGGCCGTC
CCCAAGGACCAACCGGATGTTTGGTTTGAGCCAAGACTGGTGTGGGAAGTCAAAACTGCGGATTTGACCCTCAGC
CCACGCTACCAAGCCGCTGCCGATGAGTTCCAAGGAACAACCGGAGGTGGAAAGGGTGTATCTCTGCGTTTCCCG
CGATATATGAAATCCCGCGACGATAAGAAGCCAGACGAGGCTACTACCACCCGTGCCGTGGCAGAGATGTATCGG
AAACAAGAAGCAGTCACCAAGGACACTACTAGCAAGGGAGGTGTGGATGATGACTTTGAATATTGA
Transcript >Pro_DTO377G3_2|g4299.t1
ATGGCCGATGACAAGAGCAGGAAACAGGCTACCCTGGGGTATGTACGGGATGGCCAGCAAACGATTGGGAGGTTC
TTCGGTTCGGGCGCCAACCAACCGCCGAAAAAGCAGACCACATTAGCTTTTGGCGGAAAGAGACAAGCAGCAAGC
AGTAATGCCGCTGATACTGAGCTCACGGATAACACCAATGGATTTAAGGTGGAGGACGCTAGCAATTCAGCACCA
ACTGCAGAGCCAACGAAGGGCGTGAAGCGGGAAAAAAGCCCCGAGGCGGAAGAAAGCGATGGTTCTGATATTCAG
CCTGTCTCTAAGAGGCGACGAAAGGCTTCGTCGAAGAGCTCTCCCGCTGCTAAGAAACAATCGGCATCCCCGGAG
AAGCCTGAGTCTATAAAGCCAAAAGTTGAATCGCCATCACCAAAACCAGCAATGAAAAAGCTCTCCGATGTTACT
CCTGAAGAGAAGTCACCTTCAGTAGTAGAAGACGAGGACCCACTGGAAAGCGAAGATGAAGATGACCTCAAGCCG
GAGCTCACGAGGAAATCAATCGAAAAGTTCCAAGCAAAAATACAAGCCAGTGGTAAAGATCCATACCCAGACTGG
GAAGCAGGCACTCCTGTTCCCTATGCTGCGTTATGTACCACATTCTCTCTAGTAGAGATGACCAGGAAGCGTTTG
GAAATCACAGACCATTGTTCTCTTTTCCTTCGCCAGGTTCTTCGCCTGACCCCTGCCGATTTCCTACCCACTGTT
CAACTGATGATTAATAAACTTGCTGCCGATTATGCCGGAGTTGAACTGGGCATCGGGGAGTCACTCATCATGAAA
GCTATTGGTGAATGTACCGGCCGCAGTCTTGCCGTCATCAAAGCCGATCAACGGGAAATCGGAGACCTGGGACTG
GTCGCTGCCAAAAGTCGGTCAAACCAGCCTACCATGTTCAAGCCCAAGCCTTTGACTGTTCGGGGTGTACACGAA
GGTCTTCTTGGAATTGCCAAGGTCCAGGGTCATGGATCTCAGGACAAAAAGATTTCAGGCATCAAGAAACTGCTG
TCTGCAGCCGATGCCGACACTGCTGGCAAGGGAGGCAAAGGGGTGGATATCACCAAGGACAAGGGTGGTCCCAGC
GAAGCCAAATTTATCGTTCGCTTTTTAGAAGGTAAACTGAGATTGGGACTCGCAGAGAAGACAGTTCTTGTCGCT
GTCTCTCGGGCAGTCCAGATTCACGAGGCTGAGTCAACCGGAAATAAAATTCCTTCGACAGAGCAAATGGCCGCC
GGTGAAAACATCTTCAAAACTGTTTACAGCGAGCTTCCTGCCTATGAAGTGATCATTCCTGCCGTTCTTGAGCAT
GGTCTCTTTAAGTTGCCTGAAGTGTGCAAGCTTTCTCCCGGAATTCCTATCAAGCCTATGCTTGCCAAACCGACA
AAGTCTATCACCGAGGTCCTTGACCGTTTTGAAGGGAAGGAATTCACTTGCGAATACAAGTACGATGGAGAAAGA
GCACAAATCCATTTTGTATCTCCAGATTCTATGCACCAGTATCCTGGAGCCTTGGAAACATTGCAGAAAGACAGC
AAGGGGCTGTCCTCAATATTTTCCCGCAACTCGGAAGATCTTTCAAAGAAGTATCCCGATGTTTTAGGCAAGCTT
GGCACTTGGGTCAAAGCTGACGTTAAGAGCTTTGTTCTGGATTGCGAGACTGTCGCATGGGATACCGAAGCCAAA
AAGGTTCTTCCATTCCAGCAACTGATGACCCGCAAGCGCAAGGATGTCAAAGCGGAAGATGTCAAGGTCAAGGTC
TGCGTGTACGCCTTTGATCTGCTTTTCTTCAATGGAGAGCCCTGCGTCAAGAAGTCTCTACGAGAAAGGCGAGAG
CTTATGCATGAGTGCTTCCAACCGATTGAGGGGGAGTTCCAGTTTGCCCAGTATGGCAACTCTAATGTTCTCGAT
GAGATCCAAGAATTGCTCGAGGCTAGTGTTAAGGCATCTTGTGAAGGTCTTATGGTGAAGATGCTAGACACAGCA
GAGAGTGGCTACGAGCCAAGCAAGCGGAGCCGCAACTGGCTGAAGGTCAAAAAAGATTACCTCGCCGGTGTTGGT
GACTCTCTTGATCTTGTTGTACTCGGGGCCTACTATGGTCGTGGAAAGCGTACTTCGGTTTACGGTGCTTTCCTT
CTCGCTGCCTACAACCCCAACAACGACACATATGAGACTATCTGTAACATCGGCACTGGCTTCTCTGAGGTGCTA
CTTGAAGAGCTACATCAGACGTTAGTTCCTCTGGTAATTGACCGCCCAAAGCCATTTTACACTCACTCGGCCGTC
CCCAAGGACCAACCGGATGTTTGGTTTGAGCCAAGACTGGTGTGGGAAGTCAAAACTGCGGATTTGACCCTCAGC
CCACGCTACCAAGCCGCTGCCGATGAGTTCCAAGGAACAACCGGAGGTGGAAAGGGTGTATCTCTGCGTTTCCCG
CGATATATGAAATCCCGCGACGATAAGAAGCCAGACGAGGCTACTACCACCCGTGCCGTGGCAGAGATGTATCGG
AAACAAGAAGCAGTCACCAAGGACACTACTAGCAAGGGAGGTGTGGATGATGACTTTGAATATTGA
Gene >Pro_DTO377G3_2|g4299.t1
ATGGCCGATGACAAGAGCAGGAAACAGGCTACCCTGGGGTATGTACGGGATGGCCAGCAAACGATTGGGTGCGTC
GACAATATTCGATGGCGCATGCGCCCTCTTAATCTGACCTATTTTGACTCTTATTTTCATTCACTCGGCTAATTC
GTTGTGTTTGTCTTGTAGGAGGTTCTTCGGTTCGGGCGCCAACCAACCGCCGAAAAAGCAGACCACATTAGCTTT
TGGCGGAAAGAGACAAGCAGCAAGCAGTAATGCCGCTGATACTGAGCTCACGGATAACACCAATGGATTTAAGGT
GGAGGACGCTAGCAATTCAGCACCAACTGCAGAGCCAACGAAGGGCGTGAAGCGGGAAAAAAGCCCCGAGGCGGA
AGAAAGCGATGGTTCTGATATTCAGCCTGTCTCTAAGAGGCGACGAAAGGCTTCGTCGAAGAGCTCTCCCGCTGC
TAAGAAACAATCGGCATCCCCGGAGAAGCCTGAGTCTATAAAGCCAAAAGTTGAATCGCCATCACCAAAACCAGC
AATGAAAAAGCTCTCCGATGTTACTCCTGAAGAGAAGTCACCTTCAGTAGTAGAAGACGAGGACCCACTGGAAAG
CGAAGATGAAGATGACCTCAAGCCGGAGCTCACGAGGAAATCAATCGAAAAGTTCCAAGCAAAAATACAAGCCAG
TGGTAAAGATCCATACCCAGACTGGGAAGCAGGCACTCCTGTTCCCTATGCTGCGTTATGTACCACATTCTCTCT
AGTAGAGATGACCAGGAAGCGTTTGGAAATCACAGACCATTGTTCTCTTTTCCTTCGCCAGGTTCTTCGCCTGAC
CCCTGCCGATTTCCTACCCACTGTTCAACTGATGATTAATAAACTTGCTGCCGATTATGCCGGAGTTGAACTGGG
CATCGGGGAGTCACTCATCATGAAAGCTATTGGTGAATGTACCGGCCGCAGTCTTGCCGTCATCAAAGCCGATCA
ACGGGAAATCGGAGACCTGGGACTGGTCGCTGCCAAAAGTCGGTCAAACCAGCCTACCATGTTCAAGCCCAAGCC
TTTGACTGTTCGGGGTGTACACGAAGGTCTTCTTGGAATTGCCAAGGTCCAGGGTCATGGATCTCAGGACAAAAA
GATTTCAGGCATCAAGAAACTGCTGTCTGCAGCCGATGCCGACACTGCTGGCAAGGGAGGCAAAGGGGTGGATAT
CACCAAGGACAAGGGTGGTCCCAGCGAAGCCAAATTTATCGTTCGCTTTTTAGAAGGTAAACTGAGATTGGGACT
CGCAGAGAAGACAGTTCTTGTCGCTGTCTCTCGGGCAGTCCAGATTCACGAGGCTGAGTCAACCGGAAATAAAAT
TCCTTCGACAGAGCAAATGGCCGCCGGTGAAAACATCTTCAAAACTGTTTACAGCGAGCTTCCTGCCTATGAAGT
GATCATTCCTGCCGTTCTTGAGCATGGTCTCTTTAAGTTGCCTGAAGTGTGCAAGCTTTCTCCCGGAATTCCTAT
CAAGCCTATGCTTGCCAAACCGACAAAGTCTATCACCGAGGTCCTTGACCGTTTTGAAGGGAAGGAATTCACTTG
CGAATACAAGTACGATGGAGAAAGAGCACAAATCCATTTTGTATCTCCAGATTCTATGCACCAGTATCCTGGAGC
CTTGGAAACATTGCAGAAAGACAGCAAGGGGCTGTCCTCAATATTTTCCCGCAACTCGGAAGATCTTTCAAAGAA
GTATCCCGATGTTTTAGGCAAGCTTGGCACTTGGGTCAAAGCTGACGTTAAGAGCTTTGTTCTGGATTGCGAGAC
TGTCGCATGGGATACCGAAGCCAAAAAGGTTCTTCCATTCCAGCAACTGATGACCCGCAAGCGCAAGGATGTCAA
AGCGGAAGATGTCAAGGTCAAGGTCTGCGTGTACGCCTTTGATCTGCTTTTCTTCAATGGAGAGGTAAGACTATT
ATTCTATTTGATGTCTATATAAGAGCGATTCGCTGGATCACTCTTCCTCTCTTCTCCTTCCTCACGATTCGGTGT
TCTTTCGCGTTTATGGTGAGGATGATGAGAGAGAAAGGAGGCACACCGAGTCGCTTTGGGCTACATTTCTAGTTA
TTCTCGCTAACTTTTCGACAGCCCTGCGTCAAGAAGTCTCTACGAGAAAGGCGAGAGCTTATGCATGAGTGCTTC
CAACCGATTGAGGGGGAGTTCCAGTTTGCCCAGTATGGCAACTCTAATGTTCTCGATGAGATCCAAGAATTGCTC
GAGGCTAGTGTTAAGGCATCTTGTGAAGGTCTTATGGTGAAGATGCTAGACACAGCAGAGAGTGGCTACGAGCCA
AGCAAGCGGAGCCGCAACTGGCTGAAGGTATGGTGCCTCTGTTTGTTGGTTATTTCAACCGTGCTAACTTATACA
AAGGTCAAAAAAGATTACCTCGCCGGTGTTGGTGACTCTCTTGATCTTGTTGTACTCGGGGCCTACTATGGTCGT
GGAAAGCGTACTTCGGTTTACGGTGCTTTCCTTCTCGCTGCCTACAACCCCAACAACGACACATATGAGACTATC
TGTAACATCGGCACTGGCTTCTCTGAGGTGCTACTTGAAGAGCTACATCAGACGTTAGTTCCTCTGGTAATTGAC
CGCCCAAAGCCATTTTACACTCACTCGGCCGTCCCCAAGGACCAACCGGATGTTTGGTTTGAGCCAAGACTGGTG
TGGGAAGTCAAAACTGCGGATTTGACCCTCAGCCCACGCTACCAAGCCGCTGCCGATGAGTTCCAAGGAACAACC
GGAGGTGGAAAGGGTGTATCTCTGCGTTTCCCGCGATATATGAAATCCCGCGACGATAAGAAGCCAGACGAGGCT
ACTACCACCCGTGCCGTGGCAGAGATGTATCGGAAACAAGAAGCAGTCACCAAGGACACTACTAGCAAGGGAGGT
GTGGATGATGACTTTGAATATTGA

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