Protein ID | Pro_DTO377G3_2|g4290.t1 |
Gene name | |
Location | scaffold_08:597534..600386 |
Strand | + |
Gene length (bp) | 2852 |
Transcript length (bp) | 2739 |
Coding sequence length (bp) | 2739 |
Protein length (aa) | 913 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00654 | Voltage_CLC | Voltage gated chloride channel | 7.0E-83 | 350 | 723 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005247 | voltage-gated chloride channel activity | Yes |
GO:0016020 | membrane | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0006821 | chloride transport | Yes |
GO:0015698 | inorganic anion transport | No |
GO:0015267 | channel activity | No |
GO:0022836 | gated channel activity | No |
GO:0006820 | anion transport | No |
GO:0051234 | establishment of localization | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0015108 | chloride transmembrane transporter activity | No |
GO:0022832 | voltage-gated channel activity | No |
GO:0008150 | biological_process | No |
GO:0006810 | transport | No |
GO:0005253 | anion channel activity | No |
GO:0005254 | chloride channel activity | No |
GO:0003674 | molecular_function | No |
GO:0022803 | passive transmembrane transporter activity | No |
GO:0008308 | voltage-gated anion channel activity | No |
GO:0006811 | ion transport | No |
GO:0005216 | ion channel activity | No |
GO:0015103 | inorganic anion transmembrane transporter activity | No |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0051179 | localization | No |
GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
GO:0005215 | transporter activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0008509 | anion transmembrane transporter activity | No |
GO:0009987 | cellular process | No |
GO:0005244 | voltage-gated ion channel activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 194 | 212 | 18 |
2 | 265 | 287 | 22 |
3 | 366 | 388 | 22 |
4 | 398 | 415 | 17 |
5 | 428 | 450 | 22 |
6 | 500 | 522 | 22 |
7 | 542 | 564 | 22 |
8 | 602 | 619 | 17 |
9 | 626 | 648 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4290.t1 MPRSLPKSSFASREQDDTENVRVPQTAPPSPSIYRRSQSYLSETHTEYQSLDAPFEVTETTSLLGPAQAFRRRGP RRSYTSTSGVSDTGPDSFRHVLAAGSLRRTLNHSRANSMSRGFSRRGSMDGDSRPASLPPSMKDNLTASSFLDER TWYDQFTSTDWVHDSIADGARLRLLRQRKDVRGRLLAAFDGAQGWILVALIGCITASIAYFVDVTEGSVFDLKEG FCTTRIFRNRRTCCEGLAACDAWRSWSRIFSPSGTESQWVDFVIFVFWVVALALISCALTLLTKTVVPSSISLAT LDENLGADPRGTKSGNGLGASDSPLSETETSPLHGTLPNYPSRPAMIYYSAAGSGVAEVKVINSGFVLHGYLGLK TLVIKTIGLIFSVSSGLSLGKEGPYVHIATCVGNICCRLFAKYNKNDGKRREVLSASAASGVAVAFGAPIGGVLF SLEEVSYYFPPKTLFRTFFCCIAATLSLKFLNPYGTGKIVLFEVRYLSDWQIFEIFIFILLGIMGGAAGALFIKA SNLWARSFRRIPAIKRWPMLEVFLVALFTGLVSFWNRYTRLAVTELLFELASPCESDVESTGLCPRTDGILEIVQ DLLVAFVIKSFLTIITFGIKVPAGIYVPSMVVGGLMGRIVGHLIQYWALRHPTFFLFDSCPAVAGIESCVTPGVY ALVAAGATMCGVTRLSVTLPVILFELTGSLNHVLPFSLSVLCAKWTADAIEPRSIYDLLTDMNSYPFLDSKLQPT TDALLGDIVRPVRKNRIIDISASPFLPATDLRLKLEHLLMAGELDSGLPILRDGVLAGLIPAPDLEYALDTLGEE EENTICLMAMDASSAVLDSDNEDADEVDFSQFIDPAPIALDVHSPIDLVYQCFAKLGLRYLCVTRDGKYAGLVHK KAFVKFMKENSD* |
Coding | >Pro_DTO377G3_2|g4290.t1 ATGCCTCGCTCCCTTCCAAAGTCCAGTTTTGCCTCGCGCGAACAGGACGACACCGAAAACGTGCGCGTTCCCCAA ACAGCTCCTCCCTCACCGAGTATCTACAGACGATCTCAAAGCTACCTCTCCGAAACACATACCGAATACCAGTCC CTCGATGCGCCGTTCGAGGTTACAGAAACAACGAGCCTCCTTGGGCCCGCCCAAGCCTTCCGCCGACGAGGTCCG CGACGGTCTTACACCAGCACCTCCGGGGTTTCGGACACCGGTCCGGACTCATTTAGACACGTTCTGGCGGCTGGT AGCCTGCGGCGGACGCTAAATCATAGCCGTGCCAACTCCATGAGTAGGGGGTTCAGCCGGCGAGGGAGCATGGAC GGCGACAGCAGACCCGCTAGTCTTCCTCCGTCTATGAAGGACAATCTTACTGCCTCTTCATTTCTGGATGAACGG ACTTGGTATGATCAATTCACTTCCACAGATTGGGTGCATGACAGTATCGCCGATGGAGCGCGGCTTCGCCTACTC CGTCAGCGGAAAGATGTGCGAGGCCGATTGCTGGCGGCTTTCGACGGTGCGCAAGGATGGATCTTGGTCGCGCTC ATTGGGTGCATCACGGCCTCCATTGCTTACTTCGTCGATGTCACCGAAGGATCGGTCTTTGATCTGAAGGAAGGC TTCTGCACGACCCGGATTTTCCGCAATCGAAGGACGTGCTGTGAAGGGCTGGCTGCTTGTGATGCGTGGCGGTCC TGGTCGAGGATCTTCTCACCATCGGGTACAGAAAGCCAGTGGGTTGACTTTGTCATTTTTGTCTTTTGGGTTGTG GCATTAGCTCTCATATCGTGTGCTTTGACTCTACTCACAAAGACTGTTGTTCCTTCTTCCATTTCTCTTGCGACG CTTGATGAAAACCTGGGCGCTGACCCCCGTGGTACAAAATCTGGGAATGGCCTTGGTGCCTCGGATTCTCCTCTT TCGGAGACAGAGACAAGCCCACTACATGGAACTTTGCCTAATTATCCGTCCCGTCCAGCTATGATCTACTACTCT GCTGCTGGCAGTGGAGTGGCAGAAGTCAAAGTCATTAACAGTGGTTTTGTCCTTCATGGATATCTGGGCTTGAAG ACACTAGTCATTAAAACCATTGGCTTGATTTTTAGTGTTTCGTCTGGTTTGAGCTTAGGCAAAGAAGGCCCATAC GTTCATATTGCTACCTGCGTGGGCAATATCTGTTGTCGTCTGTTCGCCAAGTATAACAAAAACGATGGAAAGCGA CGAGAGGTTCTGAGTGCCAGTGCCGCTAGTGGTGTTGCTGTTGCCTTTGGTGCTCCGATTGGCGGCGTCCTCTTC AGCTTGGAAGAAGTCAGCTATTATTTCCCACCCAAAACCCTTTTCCGGACGTTCTTTTGTTGTATTGCAGCTACG TTGTCCCTCAAGTTCCTAAACCCCTATGGAACAGGCAAGATCGTTTTATTCGAAGTCCGGTACCTTTCAGACTGG CAAATCTTCGAGATTTTCATTTTCATCCTTCTCGGTATTATGGGAGGCGCCGCTGGTGCGCTCTTCATCAAAGCC TCGAATCTATGGGCACGATCATTCCGTCGCATTCCAGCTATCAAGCGCTGGCCAATGCTTGAGGTTTTCCTCGTT GCGTTGTTTACGGGTCTTGTCAGTTTCTGGAATCGGTACACCAGGCTTGCTGTCACCGAACTTCTATTTGAGCTA GCTTCTCCGTGTGAATCAGATGTGGAAAGTACGGGCCTCTGTCCCCGCACTGACGGCATTCTTGAAATTGTCCAG GACCTTCTGGTGGCGTTTGTCATCAAGAGTTTCTTGACCATTATTACGTTCGGCATCAAAGTTCCTGCGGGAATC TACGTGCCATCTATGGTTGTTGGTGGCTTGATGGGGCGAATTGTTGGACATTTGATCCAGTACTGGGCTCTTAGA CACCCGACTTTTTTCTTATTCGACTCTTGCCCTGCAGTTGCTGGAATTGAGTCGTGCGTGACTCCAGGAGTCTAC GCATTGGTTGCCGCTGGAGCGACCATGTGCGGCGTGACAAGACTGTCGGTTACATTGCCTGTGATCCTGTTCGAA TTGACAGGAAGTCTCAACCACGTGCTTCCTTTTTCGCTGTCGGTGCTCTGCGCTAAGTGGACTGCGGATGCCATT GAACCTCGCAGCATTTATGATCTCTTGACCGACATGAACTCCTACCCCTTCCTTGATAGCAAACTCCAACCGACC ACCGATGCCTTGCTGGGGGATATAGTCCGACCAGTGCGGAAGAATCGCATCATCGATATCTCTGCATCACCATTT TTGCCAGCCACAGACCTCCGTTTGAAACTGGAACACCTGCTCATGGCAGGCGAGCTAGACAGCGGACTTCCTATT CTACGGGACGGTGTCCTAGCTGGTCTGATCCCGGCACCGGATCTCGAGTACGCACTAGATACGCTGGGCGAGGAA GAAGAAAATACGATCTGTCTGATGGCCATGGACGCTTCTTCAGCCGTCTTGGACAGCGATAACGAGGATGCCGAC GAGGTGGATTTCAGTCAATTCATTGACCCTGCTCCAATCGCTCTTGATGTTCATTCCCCTATCGATCTGGTCTAC CAATGCTTCGCCAAGCTAGGTCTTCGTTACCTCTGCGTTACTCGGGACGGAAAATATGCCGGCCTGGTACACAAG AAAGCATTCGTGAAATTCATGAAGGAGAATAGCGACTAG |
Transcript | >Pro_DTO377G3_2|g4290.t1 ATGCCTCGCTCCCTTCCAAAGTCCAGTTTTGCCTCGCGCGAACAGGACGACACCGAAAACGTGCGCGTTCCCCAA ACAGCTCCTCCCTCACCGAGTATCTACAGACGATCTCAAAGCTACCTCTCCGAAACACATACCGAATACCAGTCC CTCGATGCGCCGTTCGAGGTTACAGAAACAACGAGCCTCCTTGGGCCCGCCCAAGCCTTCCGCCGACGAGGTCCG CGACGGTCTTACACCAGCACCTCCGGGGTTTCGGACACCGGTCCGGACTCATTTAGACACGTTCTGGCGGCTGGT AGCCTGCGGCGGACGCTAAATCATAGCCGTGCCAACTCCATGAGTAGGGGGTTCAGCCGGCGAGGGAGCATGGAC GGCGACAGCAGACCCGCTAGTCTTCCTCCGTCTATGAAGGACAATCTTACTGCCTCTTCATTTCTGGATGAACGG ACTTGGTATGATCAATTCACTTCCACAGATTGGGTGCATGACAGTATCGCCGATGGAGCGCGGCTTCGCCTACTC CGTCAGCGGAAAGATGTGCGAGGCCGATTGCTGGCGGCTTTCGACGGTGCGCAAGGATGGATCTTGGTCGCGCTC ATTGGGTGCATCACGGCCTCCATTGCTTACTTCGTCGATGTCACCGAAGGATCGGTCTTTGATCTGAAGGAAGGC TTCTGCACGACCCGGATTTTCCGCAATCGAAGGACGTGCTGTGAAGGGCTGGCTGCTTGTGATGCGTGGCGGTCC TGGTCGAGGATCTTCTCACCATCGGGTACAGAAAGCCAGTGGGTTGACTTTGTCATTTTTGTCTTTTGGGTTGTG GCATTAGCTCTCATATCGTGTGCTTTGACTCTACTCACAAAGACTGTTGTTCCTTCTTCCATTTCTCTTGCGACG CTTGATGAAAACCTGGGCGCTGACCCCCGTGGTACAAAATCTGGGAATGGCCTTGGTGCCTCGGATTCTCCTCTT TCGGAGACAGAGACAAGCCCACTACATGGAACTTTGCCTAATTATCCGTCCCGTCCAGCTATGATCTACTACTCT GCTGCTGGCAGTGGAGTGGCAGAAGTCAAAGTCATTAACAGTGGTTTTGTCCTTCATGGATATCTGGGCTTGAAG ACACTAGTCATTAAAACCATTGGCTTGATTTTTAGTGTTTCGTCTGGTTTGAGCTTAGGCAAAGAAGGCCCATAC GTTCATATTGCTACCTGCGTGGGCAATATCTGTTGTCGTCTGTTCGCCAAGTATAACAAAAACGATGGAAAGCGA CGAGAGGTTCTGAGTGCCAGTGCCGCTAGTGGTGTTGCTGTTGCCTTTGGTGCTCCGATTGGCGGCGTCCTCTTC AGCTTGGAAGAAGTCAGCTATTATTTCCCACCCAAAACCCTTTTCCGGACGTTCTTTTGTTGTATTGCAGCTACG TTGTCCCTCAAGTTCCTAAACCCCTATGGAACAGGCAAGATCGTTTTATTCGAAGTCCGGTACCTTTCAGACTGG CAAATCTTCGAGATTTTCATTTTCATCCTTCTCGGTATTATGGGAGGCGCCGCTGGTGCGCTCTTCATCAAAGCC TCGAATCTATGGGCACGATCATTCCGTCGCATTCCAGCTATCAAGCGCTGGCCAATGCTTGAGGTTTTCCTCGTT GCGTTGTTTACGGGTCTTGTCAGTTTCTGGAATCGGTACACCAGGCTTGCTGTCACCGAACTTCTATTTGAGCTA GCTTCTCCGTGTGAATCAGATGTGGAAAGTACGGGCCTCTGTCCCCGCACTGACGGCATTCTTGAAATTGTCCAG GACCTTCTGGTGGCGTTTGTCATCAAGAGTTTCTTGACCATTATTACGTTCGGCATCAAAGTTCCTGCGGGAATC TACGTGCCATCTATGGTTGTTGGTGGCTTGATGGGGCGAATTGTTGGACATTTGATCCAGTACTGGGCTCTTAGA CACCCGACTTTTTTCTTATTCGACTCTTGCCCTGCAGTTGCTGGAATTGAGTCGTGCGTGACTCCAGGAGTCTAC GCATTGGTTGCCGCTGGAGCGACCATGTGCGGCGTGACAAGACTGTCGGTTACATTGCCTGTGATCCTGTTCGAA TTGACAGGAAGTCTCAACCACGTGCTTCCTTTTTCGCTGTCGGTGCTCTGCGCTAAGTGGACTGCGGATGCCATT GAACCTCGCAGCATTTATGATCTCTTGACCGACATGAACTCCTACCCCTTCCTTGATAGCAAACTCCAACCGACC ACCGATGCCTTGCTGGGGGATATAGTCCGACCAGTGCGGAAGAATCGCATCATCGATATCTCTGCATCACCATTT TTGCCAGCCACAGACCTCCGTTTGAAACTGGAACACCTGCTCATGGCAGGCGAGCTAGACAGCGGACTTCCTATT CTACGGGACGGTGTCCTAGCTGGTCTGATCCCGGCACCGGATCTCGAGTACGCACTAGATACGCTGGGCGAGGAA GAAGAAAATACGATCTGTCTGATGGCCATGGACGCTTCTTCAGCCGTCTTGGACAGCGATAACGAGGATGCCGAC GAGGTGGATTTCAGTCAATTCATTGACCCTGCTCCAATCGCTCTTGATGTTCATTCCCCTATCGATCTGGTCTAC CAATGCTTCGCCAAGCTAGGTCTTCGTTACCTCTGCGTTACTCGGGACGGAAAATATGCCGGCCTGGTACACAAG AAAGCATTCGTGAAATTCATGAAGGAGAATAGCGACTAG |
Gene | >Pro_DTO377G3_2|g4290.t1 ATGCCTCGCTCCCTTCCAAAGTCCAGTTTTGCCTCGCGCGAACAGGACGACACCGAAAACGTGCGCGTTCCCCAA ACAGCTCCTCCCTCACCGAGTATCTACAGACGATCTCAAAGCTACCTCTCCGAAACACATACCGAATACCAGTCC CTCGATGCGCCGTTCGAGGTTACAGAAACAACGAGCCTCCTTGGGCCCGCCCAAGCCTTCCGCCGACGAGGTCCG CGACGGTCTTACACCAGCACCTCCGGGGTTTCGGACACCGGTCCGGACTCATTTAGACACGTTCTGGCGGCTGGT AGCCTGCGGCGGACGCTAAATCATAGCCGTGCCAACTCCATGAGTAGGGGGTTCAGCCGGCGAGGGAGCATGGAC GGCGACAGCAGACCCGCTAGTCTTCCTCCGTCTATGAAGGACAATCTTACTGCCTCTTCATTTCTGGATGAACGG ACTTGGTATGATCAATTCACTTCCACAGATTGGGTGCATGACAGTATCGCCGATGGAGCGCGGCTTCGCCTACTC CGTCAGCGGAAAGATGTGCGAGGCCGATTGCTGGCGGCTTTCGACGGTGCGCAAGGATGGATCTTGGTCGCGCTC ATTGGGTGCATCACGGCCTCCATTGCTTACTTCGTCGATGTCACCGAAGGATCGGTCTTTGATCTGAAGGAAGGC TTCTGCACGACCCGGATTTTCCGCAATCGAAGGACGTGCTGTGAAGGGCTGGCTGCTTGTGATGCGTGGCGGTCC TGGTCGAGGATCTTCTCACCATCGGGTACAGAAAGCCAGTGGGTTGACTTTGTCATTTTTGTCTTTTGGGTTGTG GCATTAGCTCTCATATCGTGTGCTTTGACTCTACTCACAAAGACTGTTGTTCCTTCTTCCATTTCTCTTGCGACG CTTGATGAAAACCTGGGCGCTGACCCCCGTGGTACAAAATCTGGGAATGGCCTTGGTGCCTCGGATTCTCCTCTT TCGGAGACAGAGACAAGCCCACTACATGGAACTTTGCCTAATTATCCGTCCCGTCCAGCTATGATCTACTACTCT GCTGCTGGCAGTGGAGTGGCAGAAGTCAAAGTCATTAACAGTGGTTTTGTCCTTCATGGATATCTGGGCTTGAAG ACACTAGTCATTAAAACCATTGGCTTGATTTTTAGTGTTTCGTCTGGTTTGAGCTTAGGCAAAGAAGGCCCATAC GTTCATATTGCTACCTGCGTGGGCAATATCTGTTGTCGTCTGTTCGCCAAGTATAACAAAAACGATGGAAAGCGA CGAGAGGTTCTGAGTGCCAGTGCCGCTAGTGGTGTTGCTGTTGCCTTTGGTGCTCCGATTGGCGGCGTCCTCTTC AGCTTGGAAGAAGTCAGCTATTATTTCCCACCCAAAACCCTTTTCCGGACGTTCTTTTGTTGTATTGCAGCTACG TTGTCCCTCAAGTTCCTAAACCCCTATGGAACAGGCAAGATCGTTTTATTCGAAGTCCGGTACCTTTCAGACTGG CAAATCTTCGAGATTTTCATTTTCATCCTTCTCGGTATTATGGGAGGCGCCGCTGGTGCGCTCTTCATCAAAGCC TCGAATCTATGGGCACGATCATTCCGTCGCATTCCAGCTATCAAGCGCTGGCCAATGCTTGAGGTTTTCCTCGTT GCGTTGTTTACGGGTCTTGTCAGTTTCTGGAATCGGTACACCAGGCTTGCTGTCACCGAACTTCTATTTGAGCTA GCTTCTCCGTGTGAATCAGATGTGGAAAGTACGGGCCTCTGTCCCCGCACTGACGGCATTCTTGAAATTGTCCAG GACCTTCTGGTGGCGTTTGTCATCAAGAGTTTCTTGACCATTATTACGTTCGGCATCAAAGTTCCTGCGGGAATC TACGTGCCATCTATGGTTGTTGGTGGCTTGATGGGGCGAATTGTTGGACATTTGATCCAGTACTGGGCTCTTAGA CACCCGACTTTTTTCTTATTCGACTCTTGCCCTGCAGTTGCTGGAATTGAGTCGTGCGTGACTCCAGGAGTCTAC GCATTGGTTGCCGCTGGAGCGACCATGTGCGGCGTGACAAGACTGTCGGTTACATTGCCTGTGATCCTGTTCGAA TTGACAGGAAGTCTCAACCACGTGCTTCCTTTTTCGCTGTCGGTGCTCTGCGCTAAGTGGACTGCGGATGCCATT GAACCTCGCAGCATTTATGTAAGTTTTGAGATCCGCCTCGTAACTTAAATTTGACATTATACTAATTGAAACCAG GATCTCTTGACCGACATGAACTCCTACCCCTTCCTTGATAGCAAACTCCAACCGACCACCGATGCCTTGCTGGGG GATATAGTCCGACCAGTGCGGAAGAATCGCATCATCGATATCTCTGCATCACCATTTTTGCCAGCCACAGACCTC CGTTTGAAACTGGAACACCTGCTCATGGCAGGCGAGCTAGACAGCGGACTTCCTATTCTACGGGACGGTGTCCTA GCTGGTCTGATCCCGGCACCGGATCTCGAGTACGCACTAGATACGCTGGGCGAGGAAGAAGAAAATACGATCTGT CTGATGGCCATGGACGCTTCTTCAGCCGTCTTGGACAGCGATAACGAGGATGCCGACGAGGTGGATTTCAGTCAA TTCATTGACCCTGTAAGTTTGGTTAACTTCTTCAATATCTTGGCCCATACTAATTTGTTTATACATAGGCTCCAA TCGCTCTTGATGTTCATTCCCCTATCGATCTGGTCTACCAATGCTTCGCCAAGCTAGGTCTTCGTTACCTCTGCG TTACTCGGGACGGAAAATATGCCGGCCTGGTACACAAGAAAGCATTCGTGAAATTCATGAAGGAGAATAGCGACT AG |