Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4286.t1
Gene name
Locationscaffold_08:583030..583528
Strand+
Gene length (bp)498
Transcript length (bp)498
Coding sequence length (bp)498
Protein length (aa) 166

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12796 Ank_2 Ankyrin repeats (3 copies) 4.4E-11 53 117
PF13857 Ank_5 Ankyrin repeats (many copies) 1.1E-07 76 124
PF00023 Ank Ankyrin repeat 3.1E-05 88 118
PF13606 Ank_3 Ankyrin repeat 6.4E-04 86 114

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4286.t1
MAAYKVSMKAIDEEFERLMKIRQIELAIEDRKFLKTAWDSLASKTLVDLRGPMNRSLIHYASMGDCSELIRYLLL
SNVAVDARDRNKRTPLSWAAEYASLNVVKILLLNGAEINSTDDMYTTPLSWLLGAGPLNKSAETEAYLRKMGGKE
KGMKRRWILKKLHLF*
Coding >Pro_DTO377G3_2|g4286.t1
ATGGCTGCATACAAAGTCTCCATGAAAGCCATTGACGAAGAGTTCGAACGTCTCATGAAAATCCGACAAATTGAA
CTCGCCATAGAAGACCGAAAATTTCTCAAGACTGCCTGGGACTCGCTGGCATCGAAGACTCTGGTAGACCTTCGA
GGACCTATGAACAGATCGCTTATCCACTACGCGTCCATGGGTGATTGCTCCGAGCTCATAAGATACCTGCTGCTC
AGCAACGTAGCAGTGGATGCGCGTGACCGGAACAAACGGACTCCTCTCTCGTGGGCTGCAGAGTATGCTTCTTTG
AATGTTGTGAAAATTCTCTTGCTCAATGGAGCAGAAATAAATTCAACCGATGACATGTACACTACACCATTAAGT
TGGCTGCTAGGAGCAGGACCATTGAATAAGAGCGCTGAAACAGAAGCTTATTTGAGAAAGATGGGAGGGAAAGAA
AAGGGGATGAAGCGACGGTGGATTCTGAAGAAATTGCACTTGTTCTGA
Transcript >Pro_DTO377G3_2|g4286.t1
ATGGCTGCATACAAAGTCTCCATGAAAGCCATTGACGAAGAGTTCGAACGTCTCATGAAAATCCGACAAATTGAA
CTCGCCATAGAAGACCGAAAATTTCTCAAGACTGCCTGGGACTCGCTGGCATCGAAGACTCTGGTAGACCTTCGA
GGACCTATGAACAGATCGCTTATCCACTACGCGTCCATGGGTGATTGCTCCGAGCTCATAAGATACCTGCTGCTC
AGCAACGTAGCAGTGGATGCGCGTGACCGGAACAAACGGACTCCTCTCTCGTGGGCTGCAGAGTATGCTTCTTTG
AATGTTGTGAAAATTCTCTTGCTCAATGGAGCAGAAATAAATTCAACCGATGACATGTACACTACACCATTAAGT
TGGCTGCTAGGAGCAGGACCATTGAATAAGAGCGCTGAAACAGAAGCTTATTTGAGAAAGATGGGAGGGAAAGAA
AAGGGGATGAAGCGACGGTGGATTCTGAAGAAATTGCACTTGTTCTGA
Gene >Pro_DTO377G3_2|g4286.t1
ATGGCTGCATACAAAGTCTCCATGAAAGCCATTGACGAAGAGTTCGAACGTCTCATGAAAATCCGACAAATTGAA
CTCGCCATAGAAGACCGAAAATTTCTCAAGACTGCCTGGGACTCGCTGGCATCGAAGACTCTGGTAGACCTTCGA
GGACCTATGAACAGATCGCTTATCCACTACGCGTCCATGGGTGATTGCTCCGAGCTCATAAGATACCTGCTGCTC
AGCAACGTAGCAGTGGATGCGCGTGACCGGAACAAACGGACTCCTCTCTCGTGGGCTGCAGAGTATGCTTCTTTG
AATGTTGTGAAAATTCTCTTGCTCAATGGAGCAGAAATAAATTCAACCGATGACATGTACACTACACCATTAAGT
TGGCTGCTAGGAGCAGGACCATTGAATAAGAGCGCTGAAACAGAAGCTTATTTGAGAAAGATGGGAGGGAAAGAA
AAGGGGATGAAGCGACGGTGGATTCTGAAGAAATTGCACTTGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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