Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4265.t1
Gene name
Locationscaffold_08:527552..528762
Strand+
Gene length (bp)1210
Transcript length (bp)1098
Coding sequence length (bp)1098
Protein length (aa) 366

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00180 Iso_dh Isocitrate/isopropylmalate dehydrogenase 3.9E-84 12 355

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4265.t1
MSPSITSAKTYNIASIPADGIGPEVIEAGITALNALTDTLRTFKLNFKNYDWSSETYKKTGKYIPDGGLEELKKH
DAIFFGAVGAPDVPDHISLWGLRLAICQPLQQYANVRPTRVFRGTESPLRNCKAGDLDWVIIRENSEGEYAGQGG
RSHQGKTWEVATEVSIFSRVGVERIMRFAFETAQKRPRKLLTIVTKSNAQRNGMVLWDEVAKLVAADFPDVTVDK
MLVDAMTTRMVLKPETLDTIVATNLHADILSDLAASLAGSIGIAPTSNLDPTRQYPSMFEPIHGSAFDITGMGIS
NPVATFWTAAEMLAWLGEEEASKKLLVCVENVCEQGVLTRDLGGKATTKEVTAAVVAEIKKMGSN*
Coding >Pro_DTO377G3_2|g4265.t1
ATGTCGCCTTCTATTACTTCCGCAAAGACCTACAACATCGCCTCTATCCCGGCTGATGGCATCGGCCCAGAGGTT
ATCGAAGCCGGTATCACAGCTCTGAATGCTTTGACGGATACCCTCCGGACCTTCAAGCTGAACTTCAAGAACTAC
GATTGGAGCTCAGAGACATACAAGAAGACTGGAAAGTACATTCCCGATGGCGGACTTGAGGAGCTGAAGAAGCAC
GATGCTATCTTCTTCGGTGCTGTCGGAGCACCTGACGTCCCCGACCATATCTCCCTGTGGGGTCTCCGCCTGGCT
ATTTGCCAGCCCCTTCAACAATACGCCAACGTCCGCCCCACTAGAGTCTTCCGCGGTACCGAATCGCCTCTCCGT
AACTGCAAGGCCGGTGATCTCGACTGGGTGATTATCCGCGAGAACAGCGAAGGCGAATACGCTGGTCAAGGTGGC
CGTTCTCACCAAGGCAAGACATGGGAGGTTGCCACCGAGGTCTCTATCTTCTCTCGTGTGGGTGTTGAGAGAATA
ATGCGCTTCGCCTTCGAGACCGCCCAGAAGCGTCCCCGTAAGCTTTTGACTATTGTCACGAAGAGCAATGCTCAG
CGTAACGGCATGGTCCTCTGGGATGAGGTTGCCAAGCTGGTTGCTGCTGACTTCCCGGATGTCACTGTCGACAAG
ATGCTAGTTGATGCCATGACTACTCGTATGGTGTTGAAGCCCGAGACTCTGGATACCATTGTGGCTACCAACTTG
CACGCCGATATTCTTTCCGATCTTGCTGCTTCTCTGGCTGGTTCTATCGGAATCGCCCCTACCTCTAACCTTGAT
CCCACTCGCCAGTACCCCAGCATGTTTGAGCCTATTCACGGCTCTGCTTTCGATATCACAGGCATGGGCATCTCT
AACCCCGTGGCTACTTTCTGGACTGCTGCCGAAATGCTCGCCTGGTTGGGCGAGGAGGAGGCCTCGAAGAAGCTG
CTTGTATGCGTTGAGAATGTCTGCGAGCAGGGAGTTCTCACTCGTGATTTGGGTGGAAAGGCTACAACTAAGGAG
GTCACCGCGGCTGTTGTCGCTGAGATCAAGAAAATGGGTTCCAATTAG
Transcript >Pro_DTO377G3_2|g4265.t1
ATGTCGCCTTCTATTACTTCCGCAAAGACCTACAACATCGCCTCTATCCCGGCTGATGGCATCGGCCCAGAGGTT
ATCGAAGCCGGTATCACAGCTCTGAATGCTTTGACGGATACCCTCCGGACCTTCAAGCTGAACTTCAAGAACTAC
GATTGGAGCTCAGAGACATACAAGAAGACTGGAAAGTACATTCCCGATGGCGGACTTGAGGAGCTGAAGAAGCAC
GATGCTATCTTCTTCGGTGCTGTCGGAGCACCTGACGTCCCCGACCATATCTCCCTGTGGGGTCTCCGCCTGGCT
ATTTGCCAGCCCCTTCAACAATACGCCAACGTCCGCCCCACTAGAGTCTTCCGCGGTACCGAATCGCCTCTCCGT
AACTGCAAGGCCGGTGATCTCGACTGGGTGATTATCCGCGAGAACAGCGAAGGCGAATACGCTGGTCAAGGTGGC
CGTTCTCACCAAGGCAAGACATGGGAGGTTGCCACCGAGGTCTCTATCTTCTCTCGTGTGGGTGTTGAGAGAATA
ATGCGCTTCGCCTTCGAGACCGCCCAGAAGCGTCCCCGTAAGCTTTTGACTATTGTCACGAAGAGCAATGCTCAG
CGTAACGGCATGGTCCTCTGGGATGAGGTTGCCAAGCTGGTTGCTGCTGACTTCCCGGATGTCACTGTCGACAAG
ATGCTAGTTGATGCCATGACTACTCGTATGGTGTTGAAGCCCGAGACTCTGGATACCATTGTGGCTACCAACTTG
CACGCCGATATTCTTTCCGATCTTGCTGCTTCTCTGGCTGGTTCTATCGGAATCGCCCCTACCTCTAACCTTGAT
CCCACTCGCCAGTACCCCAGCATGTTTGAGCCTATTCACGGCTCTGCTTTCGATATCACAGGCATGGGCATCTCT
AACCCCGTGGCTACTTTCTGGACTGCTGCCGAAATGCTCGCCTGGTTGGGCGAGGAGGAGGCCTCGAAGAAGCTG
CTTGTATGCGTTGAGAATGTCTGCGAGCAGGGAGTTCTCACTCGTGATTTGGGTGGAAAGGCTACAACTAAGGAG
GTCACCGCGGCTGTTGTCGCTGAGATCAAGAAAATGGGTTCCAATTAG
Gene >Pro_DTO377G3_2|g4265.t1
ATGTCGCCTTCTATTACTTCCGCAAAGACCTACAACATCGCCTCTATCCCGGCTGATGGCATCGGCCCAGAGGTT
ATCGAAGCCGGTATCACAGCTCTGAATGCTTTGACGGATACCCTCCGGACCTTCAAGCTGAACTTCAAGAACTAC
GATTGGAGCTCAGAGACATACAAGAAGACTGGAAAGTACATTCCCGATGGCGGACTTGAGGAGCTGAAGAAGCAC
GATGCTATCTTCTTCGGTGCTGTCGGAGCACCTGGTACATATAACACTCCAATTCAACAATTGATGTTCAAAATA
ACTAACATGGCCTAGACGTCCCCGACCATATCTCCCTGTGGGGTCTCCGCCTGGCTATTTGCCAGCCCCTTCAAC
AATACGCCAACGTCCGCCCCACTAGAGTCTTCCGCGGTACCGAATCGCCTCTCCGTAACTGCAAGGCCGGTGATC
TCGACTGGGTGATTATCCGCGAGAACAGCGAAGGCGAATACGCTGGTCAAGGTGGCCGTTCTCACCAAGGCAAGA
CATGGGAGGTTGCCACCGAGGTCTCTATCTTCTCTCGTGTGGGTGTTGAGAGAATAATGCGCTTCGCCTTCGAGA
CCGCCCAGAAGCGTCCCCGTAAGCTTTTGACTATTGTCACGAAGAGCAATGCTCAGCGTAACGGCATGGTCCTCT
GGGATGAGGTTGCCAAGCTGGTTGCTGCTGACTTCCCGGATGTCACTGTCGACAAGATGCTAGTTGATGCCATGA
CTACTCGTATGGTGTTGAAGCCCGAGACTCTGGATACCATTGTGGCTACCAACTTGGTAAGTACAGAAACACTCC
TAAGCCCGCGGAAGTACCTTACTAATAAAACTTATAGCACGCCGATATTCTTTCCGATCTTGCTGCTTCTCTGGC
TGGTTCTATCGGAATCGCCCCTACCTCTAACCTTGATCCCACTCGCCAGTACCCCAGCATGTTTGAGCCTATTCA
CGGCTCTGCTTTCGATATCACAGGCATGGGCATCTCTAACCCCGTGGCTACTTTCTGGACTGCTGCCGAAATGCT
CGCCTGGTTGGGCGAGGAGGAGGCCTCGAAGAAGCTGCTTGTATGCGTTGAGAATGTCTGCGAGCAGGGAGTTCT
CACTCGTGATTTGGGTGGAAAGGCTACAACTAAGGAGGTCACCGCGGCTGTTGTCGCTGAGATCAAGAAAATGGG
TTCCAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail