Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4249.t1
Gene name
Locationscaffold_08:465286..467272
Strand+
Gene length (bp)1986
Transcript length (bp)1986
Coding sequence length (bp)1986
Protein length (aa) 662

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10391 DNA_pol_lambd_f Fingers domain of DNA polymerase lambda 2.6E-21 386 434
PF14791 DNA_pol_B_thumb DNA polymerase beta thumb 2.3E-20 588 659
PF14792 DNA_pol_B_palm DNA polymerase beta palm 1.6E-16 437 581
PF14716 HHH_8 Helix-hairpin-helix domain 9.9E-10 290 353

GO

GO Term Description Terminal node
GO:0034061 DNA polymerase activity Yes
GO:0003677 DNA binding Yes
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0140097 catalytic activity, acting on DNA No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0016740 transferase activity No
GO:0016779 nucleotidyltransferase activity No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4249.t1
MIADKSSSSKDKTEHVSLFSTQPPIFILPMHLSLEELDEIEGRLIDYGGRLTYDIAEAGLVLGKVGRVKRAALEL
RTRGVWTEELIPSSTPKSIGGGGEPPLKRRRTDQYDGINDVPVEIIDLSTESEGEDGATNQHDPSKQQIAEKKAE
AIENSITVLKLEWLDTSITSGRCVSQDPFVVYRGRKIPSPPTTVSENKQDLLKQKSNQIIQRAKEDAGVPTPRAP
PPDHIHARRSKEPPDRSSQHPRPTLYRKTTSEHEMDESNAPSQPDWVRDQVIFACLRSAPLHPPNEDFILQLVKI
RRIRELTIDKIGVRAYSTAIAALAAYPYPIQRPSEILALPGCNAKIADLFAQFQQHGGCEHTDDDGNVAAADSLE
KDPILRVLNSFFQIWGVGAKTAREFYQRGWRDLDDIVEHGWDTLSRVQQIGVKFYEEFQEGIPRAESEGIATVIQ
DHAARVRAEDANGIECVIVGGYRRGKQVSGDVDVILSHRDDAVTRNLIVDLVASLEAERYITHTLSLHLTSSLRE
QQTLPFHGDDTRKFDTLDKALVVWQDPHFDATAVEHNDRQVKNPNIHRRVDIIISPWRTVGCAILGWSGDLTFQR
DLRRYAKKARFLKFDSSGVRDRGTGRQVDLEEDGETWEEREKLVMEGLGIGWRPPEERCSR*
Coding >Pro_DTO377G3_2|g4249.t1
ATGATCGCAGATAAGAGCTCTTCTTCAAAAGACAAGACAGAACATGTCTCCCTCTTCTCAACCCAACCTCCCATC
TTCATTTTGCCAATGCATCTCTCCCTAGAGGAGCTGGACGAGATTGAAGGCCGATTGATAGATTATGGCGGAAGA
CTTACCTATGATATTGCCGAAGCTGGTCTCGTTTTGGGAAAAGTCGGGCGCGTGAAGCGTGCAGCGCTGGAACTG
CGCACCCGCGGTGTCTGGACAGAGGAGCTCATACCCAGCTCAACTCCAAAATCAATTGGCGGTGGCGGCGAGCCC
CCTCTCAAGCGCAGGCGCACAGATCAGTACGACGGAATCAATGATGTCCCGGTTGAGATTATCGATCTCAGTACC
GAGTCTGAAGGCGAGGATGGAGCTACGAATCAACATGATCCATCAAAGCAGCAGATCGCAGAGAAAAAGGCAGAA
GCAATTGAAAATTCAATCACAGTACTGAAGCTCGAGTGGCTGGATACCTCTATCACATCCGGCAGATGTGTTTCC
CAAGACCCATTCGTTGTCTACCGTGGGCGAAAGATCCCTTCTCCCCCAACGACAGTGTCAGAAAATAAGCAAGAC
TTACTTAAACAGAAATCAAATCAAATAATCCAGCGTGCAAAGGAAGATGCTGGTGTACCAACGCCACGAGCTCCT
CCTCCGGACCACATTCATGCACGGCGCTCAAAAGAACCCCCTGACAGATCTTCCCAGCACCCCCGACCGACGCTA
TACCGAAAGACAACCTCGGAACATGAAATGGATGAATCTAACGCACCCTCACAACCAGACTGGGTCCGTGACCAA
GTCATATTCGCATGCCTGCGCTCAGCACCCTTACACCCTCCAAACGAAGATTTTATCTTGCAACTCGTGAAAATA
AGACGTATTCGCGAACTCACCATCGACAAGATCGGCGTGCGCGCATATAGTACCGCCATCGCAGCATTGGCAGCA
TACCCATATCCCATCCAACGGCCGAGCGAGATCCTCGCTTTACCCGGGTGCAACGCCAAGATTGCGGACTTGTTC
GCGCAGTTCCAACAACATGGTGGCTGCGAGCATACCGACGACGACGGGAACGTTGCCGCTGCCGACTCGCTGGAG
AAAGATCCTATTCTCCGGGTTCTGAACTCGTTCTTTCAGATATGGGGTGTTGGGGCTAAGACAGCACGCGAGTTT
TACCAGCGTGGGTGGCGCGACCTCGATGATATTGTCGAGCATGGGTGGGATACGCTCTCGCGTGTACAGCAGATT
GGAGTGAAATTCTACGAGGAGTTCCAGGAAGGTATTCCCCGTGCTGAGAGCGAGGGTATTGCTACTGTGATTCAG
GATCATGCTGCTCGGGTTCGGGCGGAAGATGCAAATGGAATTGAGTGTGTGATTGTTGGCGGATACCGGCGTGGG
AAGCAAGTTAGTGGTGATGTTGATGTTATCTTGAGTCATCGTGATGATGCGGTGACTCGGAATCTGATTGTTGAT
CTTGTTGCGAGTCTTGAAGCTGAACGATATATCACTCATACGCTCTCGTTGCATTTGACTTCTTCGCTGCGCGAG
CAACAGACGTTGCCTTTTCATGGTGATGATACAAGGAAATTCGATACTTTGGACAAGGCACTGGTTGTCTGGCAA
GACCCACACTTCGATGCTACAGCTGTTGAACATAATGACCGTCAGGTGAAAAATCCAAACATCCATCGTCGTGTC
GATATCATTATATCGCCTTGGCGCACGGTCGGTTGCGCGATACTCGGCTGGTCTGGTGATCTGACTTTTCAGCGA
GATCTACGGCGGTATGCGAAGAAAGCACGCTTCTTGAAGTTCGATTCGAGTGGTGTGAGAGACCGAGGTACTGGA
AGACAAGTTGACCTCGAAGAAGATGGAGAGACATGGGAGGAGAGGGAGAAACTTGTGATGGAGGGACTGGGAATA
GGCTGGAGACCACCAGAAGAACGCTGCTCGAGATAG
Transcript >Pro_DTO377G3_2|g4249.t1
ATGATCGCAGATAAGAGCTCTTCTTCAAAAGACAAGACAGAACATGTCTCCCTCTTCTCAACCCAACCTCCCATC
TTCATTTTGCCAATGCATCTCTCCCTAGAGGAGCTGGACGAGATTGAAGGCCGATTGATAGATTATGGCGGAAGA
CTTACCTATGATATTGCCGAAGCTGGTCTCGTTTTGGGAAAAGTCGGGCGCGTGAAGCGTGCAGCGCTGGAACTG
CGCACCCGCGGTGTCTGGACAGAGGAGCTCATACCCAGCTCAACTCCAAAATCAATTGGCGGTGGCGGCGAGCCC
CCTCTCAAGCGCAGGCGCACAGATCAGTACGACGGAATCAATGATGTCCCGGTTGAGATTATCGATCTCAGTACC
GAGTCTGAAGGCGAGGATGGAGCTACGAATCAACATGATCCATCAAAGCAGCAGATCGCAGAGAAAAAGGCAGAA
GCAATTGAAAATTCAATCACAGTACTGAAGCTCGAGTGGCTGGATACCTCTATCACATCCGGCAGATGTGTTTCC
CAAGACCCATTCGTTGTCTACCGTGGGCGAAAGATCCCTTCTCCCCCAACGACAGTGTCAGAAAATAAGCAAGAC
TTACTTAAACAGAAATCAAATCAAATAATCCAGCGTGCAAAGGAAGATGCTGGTGTACCAACGCCACGAGCTCCT
CCTCCGGACCACATTCATGCACGGCGCTCAAAAGAACCCCCTGACAGATCTTCCCAGCACCCCCGACCGACGCTA
TACCGAAAGACAACCTCGGAACATGAAATGGATGAATCTAACGCACCCTCACAACCAGACTGGGTCCGTGACCAA
GTCATATTCGCATGCCTGCGCTCAGCACCCTTACACCCTCCAAACGAAGATTTTATCTTGCAACTCGTGAAAATA
AGACGTATTCGCGAACTCACCATCGACAAGATCGGCGTGCGCGCATATAGTACCGCCATCGCAGCATTGGCAGCA
TACCCATATCCCATCCAACGGCCGAGCGAGATCCTCGCTTTACCCGGGTGCAACGCCAAGATTGCGGACTTGTTC
GCGCAGTTCCAACAACATGGTGGCTGCGAGCATACCGACGACGACGGGAACGTTGCCGCTGCCGACTCGCTGGAG
AAAGATCCTATTCTCCGGGTTCTGAACTCGTTCTTTCAGATATGGGGTGTTGGGGCTAAGACAGCACGCGAGTTT
TACCAGCGTGGGTGGCGCGACCTCGATGATATTGTCGAGCATGGGTGGGATACGCTCTCGCGTGTACAGCAGATT
GGAGTGAAATTCTACGAGGAGTTCCAGGAAGGTATTCCCCGTGCTGAGAGCGAGGGTATTGCTACTGTGATTCAG
GATCATGCTGCTCGGGTTCGGGCGGAAGATGCAAATGGAATTGAGTGTGTGATTGTTGGCGGATACCGGCGTGGG
AAGCAAGTTAGTGGTGATGTTGATGTTATCTTGAGTCATCGTGATGATGCGGTGACTCGGAATCTGATTGTTGAT
CTTGTTGCGAGTCTTGAAGCTGAACGATATATCACTCATACGCTCTCGTTGCATTTGACTTCTTCGCTGCGCGAG
CAACAGACGTTGCCTTTTCATGGTGATGATACAAGGAAATTCGATACTTTGGACAAGGCACTGGTTGTCTGGCAA
GACCCACACTTCGATGCTACAGCTGTTGAACATAATGACCGTCAGGTGAAAAATCCAAACATCCATCGTCGTGTC
GATATCATTATATCGCCTTGGCGCACGGTCGGTTGCGCGATACTCGGCTGGTCTGGTGATCTGACTTTTCAGCGA
GATCTACGGCGGTATGCGAAGAAAGCACGCTTCTTGAAGTTCGATTCGAGTGGTGTGAGAGACCGAGGTACTGGA
AGACAAGTTGACCTCGAAGAAGATGGAGAGACATGGGAGGAGAGGGAGAAACTTGTGATGGAGGGACTGGGAATA
GGCTGGAGACCACCAGAAGAACGCTGCTCGAGATAG
Gene >Pro_DTO377G3_2|g4249.t1
ATGATCGCAGATAAGAGCTCTTCTTCAAAAGACAAGACAGAACATGTCTCCCTCTTCTCAACCCAACCTCCCATC
TTCATTTTGCCAATGCATCTCTCCCTAGAGGAGCTGGACGAGATTGAAGGCCGATTGATAGATTATGGCGGAAGA
CTTACCTATGATATTGCCGAAGCTGGTCTCGTTTTGGGAAAAGTCGGGCGCGTGAAGCGTGCAGCGCTGGAACTG
CGCACCCGCGGTGTCTGGACAGAGGAGCTCATACCCAGCTCAACTCCAAAATCAATTGGCGGTGGCGGCGAGCCC
CCTCTCAAGCGCAGGCGCACAGATCAGTACGACGGAATCAATGATGTCCCGGTTGAGATTATCGATCTCAGTACC
GAGTCTGAAGGCGAGGATGGAGCTACGAATCAACATGATCCATCAAAGCAGCAGATCGCAGAGAAAAAGGCAGAA
GCAATTGAAAATTCAATCACAGTACTGAAGCTCGAGTGGCTGGATACCTCTATCACATCCGGCAGATGTGTTTCC
CAAGACCCATTCGTTGTCTACCGTGGGCGAAAGATCCCTTCTCCCCCAACGACAGTGTCAGAAAATAAGCAAGAC
TTACTTAAACAGAAATCAAATCAAATAATCCAGCGTGCAAAGGAAGATGCTGGTGTACCAACGCCACGAGCTCCT
CCTCCGGACCACATTCATGCACGGCGCTCAAAAGAACCCCCTGACAGATCTTCCCAGCACCCCCGACCGACGCTA
TACCGAAAGACAACCTCGGAACATGAAATGGATGAATCTAACGCACCCTCACAACCAGACTGGGTCCGTGACCAA
GTCATATTCGCATGCCTGCGCTCAGCACCCTTACACCCTCCAAACGAAGATTTTATCTTGCAACTCGTGAAAATA
AGACGTATTCGCGAACTCACCATCGACAAGATCGGCGTGCGCGCATATAGTACCGCCATCGCAGCATTGGCAGCA
TACCCATATCCCATCCAACGGCCGAGCGAGATCCTCGCTTTACCCGGGTGCAACGCCAAGATTGCGGACTTGTTC
GCGCAGTTCCAACAACATGGTGGCTGCGAGCATACCGACGACGACGGGAACGTTGCCGCTGCCGACTCGCTGGAG
AAAGATCCTATTCTCCGGGTTCTGAACTCGTTCTTTCAGATATGGGGTGTTGGGGCTAAGACAGCACGCGAGTTT
TACCAGCGTGGGTGGCGCGACCTCGATGATATTGTCGAGCATGGGTGGGATACGCTCTCGCGTGTACAGCAGATT
GGAGTGAAATTCTACGAGGAGTTCCAGGAAGGTATTCCCCGTGCTGAGAGCGAGGGTATTGCTACTGTGATTCAG
GATCATGCTGCTCGGGTTCGGGCGGAAGATGCAAATGGAATTGAGTGTGTGATTGTTGGCGGATACCGGCGTGGG
AAGCAAGTTAGTGGTGATGTTGATGTTATCTTGAGTCATCGTGATGATGCGGTGACTCGGAATCTGATTGTTGAT
CTTGTTGCGAGTCTTGAAGCTGAACGATATATCACTCATACGCTCTCGTTGCATTTGACTTCTTCGCTGCGCGAG
CAACAGACGTTGCCTTTTCATGGTGATGATACAAGGAAATTCGATACTTTGGACAAGGCACTGGTTGTCTGGCAA
GACCCACACTTCGATGCTACAGCTGTTGAACATAATGACCGTCAGGTGAAAAATCCAAACATCCATCGTCGTGTC
GATATCATTATATCGCCTTGGCGCACGGTCGGTTGCGCGATACTCGGCTGGTCTGGTGATCTGACTTTTCAGCGA
GATCTACGGCGGTATGCGAAGAAAGCACGCTTCTTGAAGTTCGATTCGAGTGGTGTGAGAGACCGAGGTACTGGA
AGACAAGTTGACCTCGAAGAAGATGGAGAGACATGGGAGGAGAGGGAGAAACTTGTGATGGAGGGACTGGGAATA
GGCTGGAGACCACCAGAAGAACGCTGCTCGAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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