Protein ID | Pro_DTO377G3_2|g4249.t1 |
Gene name | |
Location | scaffold_08:465286..467272 |
Strand | + |
Gene length (bp) | 1986 |
Transcript length (bp) | 1986 |
Coding sequence length (bp) | 1986 |
Protein length (aa) | 662 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10391 | DNA_pol_lambd_f | Fingers domain of DNA polymerase lambda | 2.6E-21 | 386 | 434 |
PF14791 | DNA_pol_B_thumb | DNA polymerase beta thumb | 2.3E-20 | 588 | 659 |
PF14792 | DNA_pol_B_palm | DNA polymerase beta palm | 1.6E-16 | 437 | 581 |
PF14716 | HHH_8 | Helix-hairpin-helix domain | 9.9E-10 | 290 | 353 |
GO Term | Description | Terminal node |
---|---|---|
GO:0034061 | DNA polymerase activity | Yes |
GO:0003677 | DNA binding | Yes |
GO:0140640 | catalytic activity, acting on a nucleic acid | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:0140097 | catalytic activity, acting on DNA | No |
GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
GO:0016740 | transferase activity | No |
GO:0016779 | nucleotidyltransferase activity | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0003676 | nucleic acid binding | No |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4249.t1 MIADKSSSSKDKTEHVSLFSTQPPIFILPMHLSLEELDEIEGRLIDYGGRLTYDIAEAGLVLGKVGRVKRAALEL RTRGVWTEELIPSSTPKSIGGGGEPPLKRRRTDQYDGINDVPVEIIDLSTESEGEDGATNQHDPSKQQIAEKKAE AIENSITVLKLEWLDTSITSGRCVSQDPFVVYRGRKIPSPPTTVSENKQDLLKQKSNQIIQRAKEDAGVPTPRAP PPDHIHARRSKEPPDRSSQHPRPTLYRKTTSEHEMDESNAPSQPDWVRDQVIFACLRSAPLHPPNEDFILQLVKI RRIRELTIDKIGVRAYSTAIAALAAYPYPIQRPSEILALPGCNAKIADLFAQFQQHGGCEHTDDDGNVAAADSLE KDPILRVLNSFFQIWGVGAKTAREFYQRGWRDLDDIVEHGWDTLSRVQQIGVKFYEEFQEGIPRAESEGIATVIQ DHAARVRAEDANGIECVIVGGYRRGKQVSGDVDVILSHRDDAVTRNLIVDLVASLEAERYITHTLSLHLTSSLRE QQTLPFHGDDTRKFDTLDKALVVWQDPHFDATAVEHNDRQVKNPNIHRRVDIIISPWRTVGCAILGWSGDLTFQR DLRRYAKKARFLKFDSSGVRDRGTGRQVDLEEDGETWEEREKLVMEGLGIGWRPPEERCSR* |
Coding | >Pro_DTO377G3_2|g4249.t1 ATGATCGCAGATAAGAGCTCTTCTTCAAAAGACAAGACAGAACATGTCTCCCTCTTCTCAACCCAACCTCCCATC TTCATTTTGCCAATGCATCTCTCCCTAGAGGAGCTGGACGAGATTGAAGGCCGATTGATAGATTATGGCGGAAGA CTTACCTATGATATTGCCGAAGCTGGTCTCGTTTTGGGAAAAGTCGGGCGCGTGAAGCGTGCAGCGCTGGAACTG CGCACCCGCGGTGTCTGGACAGAGGAGCTCATACCCAGCTCAACTCCAAAATCAATTGGCGGTGGCGGCGAGCCC CCTCTCAAGCGCAGGCGCACAGATCAGTACGACGGAATCAATGATGTCCCGGTTGAGATTATCGATCTCAGTACC GAGTCTGAAGGCGAGGATGGAGCTACGAATCAACATGATCCATCAAAGCAGCAGATCGCAGAGAAAAAGGCAGAA GCAATTGAAAATTCAATCACAGTACTGAAGCTCGAGTGGCTGGATACCTCTATCACATCCGGCAGATGTGTTTCC CAAGACCCATTCGTTGTCTACCGTGGGCGAAAGATCCCTTCTCCCCCAACGACAGTGTCAGAAAATAAGCAAGAC TTACTTAAACAGAAATCAAATCAAATAATCCAGCGTGCAAAGGAAGATGCTGGTGTACCAACGCCACGAGCTCCT CCTCCGGACCACATTCATGCACGGCGCTCAAAAGAACCCCCTGACAGATCTTCCCAGCACCCCCGACCGACGCTA TACCGAAAGACAACCTCGGAACATGAAATGGATGAATCTAACGCACCCTCACAACCAGACTGGGTCCGTGACCAA GTCATATTCGCATGCCTGCGCTCAGCACCCTTACACCCTCCAAACGAAGATTTTATCTTGCAACTCGTGAAAATA AGACGTATTCGCGAACTCACCATCGACAAGATCGGCGTGCGCGCATATAGTACCGCCATCGCAGCATTGGCAGCA TACCCATATCCCATCCAACGGCCGAGCGAGATCCTCGCTTTACCCGGGTGCAACGCCAAGATTGCGGACTTGTTC GCGCAGTTCCAACAACATGGTGGCTGCGAGCATACCGACGACGACGGGAACGTTGCCGCTGCCGACTCGCTGGAG AAAGATCCTATTCTCCGGGTTCTGAACTCGTTCTTTCAGATATGGGGTGTTGGGGCTAAGACAGCACGCGAGTTT TACCAGCGTGGGTGGCGCGACCTCGATGATATTGTCGAGCATGGGTGGGATACGCTCTCGCGTGTACAGCAGATT GGAGTGAAATTCTACGAGGAGTTCCAGGAAGGTATTCCCCGTGCTGAGAGCGAGGGTATTGCTACTGTGATTCAG GATCATGCTGCTCGGGTTCGGGCGGAAGATGCAAATGGAATTGAGTGTGTGATTGTTGGCGGATACCGGCGTGGG AAGCAAGTTAGTGGTGATGTTGATGTTATCTTGAGTCATCGTGATGATGCGGTGACTCGGAATCTGATTGTTGAT CTTGTTGCGAGTCTTGAAGCTGAACGATATATCACTCATACGCTCTCGTTGCATTTGACTTCTTCGCTGCGCGAG CAACAGACGTTGCCTTTTCATGGTGATGATACAAGGAAATTCGATACTTTGGACAAGGCACTGGTTGTCTGGCAA GACCCACACTTCGATGCTACAGCTGTTGAACATAATGACCGTCAGGTGAAAAATCCAAACATCCATCGTCGTGTC GATATCATTATATCGCCTTGGCGCACGGTCGGTTGCGCGATACTCGGCTGGTCTGGTGATCTGACTTTTCAGCGA GATCTACGGCGGTATGCGAAGAAAGCACGCTTCTTGAAGTTCGATTCGAGTGGTGTGAGAGACCGAGGTACTGGA AGACAAGTTGACCTCGAAGAAGATGGAGAGACATGGGAGGAGAGGGAGAAACTTGTGATGGAGGGACTGGGAATA GGCTGGAGACCACCAGAAGAACGCTGCTCGAGATAG |
Transcript | >Pro_DTO377G3_2|g4249.t1 ATGATCGCAGATAAGAGCTCTTCTTCAAAAGACAAGACAGAACATGTCTCCCTCTTCTCAACCCAACCTCCCATC TTCATTTTGCCAATGCATCTCTCCCTAGAGGAGCTGGACGAGATTGAAGGCCGATTGATAGATTATGGCGGAAGA CTTACCTATGATATTGCCGAAGCTGGTCTCGTTTTGGGAAAAGTCGGGCGCGTGAAGCGTGCAGCGCTGGAACTG CGCACCCGCGGTGTCTGGACAGAGGAGCTCATACCCAGCTCAACTCCAAAATCAATTGGCGGTGGCGGCGAGCCC CCTCTCAAGCGCAGGCGCACAGATCAGTACGACGGAATCAATGATGTCCCGGTTGAGATTATCGATCTCAGTACC GAGTCTGAAGGCGAGGATGGAGCTACGAATCAACATGATCCATCAAAGCAGCAGATCGCAGAGAAAAAGGCAGAA GCAATTGAAAATTCAATCACAGTACTGAAGCTCGAGTGGCTGGATACCTCTATCACATCCGGCAGATGTGTTTCC CAAGACCCATTCGTTGTCTACCGTGGGCGAAAGATCCCTTCTCCCCCAACGACAGTGTCAGAAAATAAGCAAGAC TTACTTAAACAGAAATCAAATCAAATAATCCAGCGTGCAAAGGAAGATGCTGGTGTACCAACGCCACGAGCTCCT CCTCCGGACCACATTCATGCACGGCGCTCAAAAGAACCCCCTGACAGATCTTCCCAGCACCCCCGACCGACGCTA TACCGAAAGACAACCTCGGAACATGAAATGGATGAATCTAACGCACCCTCACAACCAGACTGGGTCCGTGACCAA GTCATATTCGCATGCCTGCGCTCAGCACCCTTACACCCTCCAAACGAAGATTTTATCTTGCAACTCGTGAAAATA AGACGTATTCGCGAACTCACCATCGACAAGATCGGCGTGCGCGCATATAGTACCGCCATCGCAGCATTGGCAGCA TACCCATATCCCATCCAACGGCCGAGCGAGATCCTCGCTTTACCCGGGTGCAACGCCAAGATTGCGGACTTGTTC GCGCAGTTCCAACAACATGGTGGCTGCGAGCATACCGACGACGACGGGAACGTTGCCGCTGCCGACTCGCTGGAG AAAGATCCTATTCTCCGGGTTCTGAACTCGTTCTTTCAGATATGGGGTGTTGGGGCTAAGACAGCACGCGAGTTT TACCAGCGTGGGTGGCGCGACCTCGATGATATTGTCGAGCATGGGTGGGATACGCTCTCGCGTGTACAGCAGATT GGAGTGAAATTCTACGAGGAGTTCCAGGAAGGTATTCCCCGTGCTGAGAGCGAGGGTATTGCTACTGTGATTCAG GATCATGCTGCTCGGGTTCGGGCGGAAGATGCAAATGGAATTGAGTGTGTGATTGTTGGCGGATACCGGCGTGGG AAGCAAGTTAGTGGTGATGTTGATGTTATCTTGAGTCATCGTGATGATGCGGTGACTCGGAATCTGATTGTTGAT CTTGTTGCGAGTCTTGAAGCTGAACGATATATCACTCATACGCTCTCGTTGCATTTGACTTCTTCGCTGCGCGAG CAACAGACGTTGCCTTTTCATGGTGATGATACAAGGAAATTCGATACTTTGGACAAGGCACTGGTTGTCTGGCAA GACCCACACTTCGATGCTACAGCTGTTGAACATAATGACCGTCAGGTGAAAAATCCAAACATCCATCGTCGTGTC GATATCATTATATCGCCTTGGCGCACGGTCGGTTGCGCGATACTCGGCTGGTCTGGTGATCTGACTTTTCAGCGA GATCTACGGCGGTATGCGAAGAAAGCACGCTTCTTGAAGTTCGATTCGAGTGGTGTGAGAGACCGAGGTACTGGA AGACAAGTTGACCTCGAAGAAGATGGAGAGACATGGGAGGAGAGGGAGAAACTTGTGATGGAGGGACTGGGAATA GGCTGGAGACCACCAGAAGAACGCTGCTCGAGATAG |
Gene | >Pro_DTO377G3_2|g4249.t1 ATGATCGCAGATAAGAGCTCTTCTTCAAAAGACAAGACAGAACATGTCTCCCTCTTCTCAACCCAACCTCCCATC TTCATTTTGCCAATGCATCTCTCCCTAGAGGAGCTGGACGAGATTGAAGGCCGATTGATAGATTATGGCGGAAGA CTTACCTATGATATTGCCGAAGCTGGTCTCGTTTTGGGAAAAGTCGGGCGCGTGAAGCGTGCAGCGCTGGAACTG CGCACCCGCGGTGTCTGGACAGAGGAGCTCATACCCAGCTCAACTCCAAAATCAATTGGCGGTGGCGGCGAGCCC CCTCTCAAGCGCAGGCGCACAGATCAGTACGACGGAATCAATGATGTCCCGGTTGAGATTATCGATCTCAGTACC GAGTCTGAAGGCGAGGATGGAGCTACGAATCAACATGATCCATCAAAGCAGCAGATCGCAGAGAAAAAGGCAGAA GCAATTGAAAATTCAATCACAGTACTGAAGCTCGAGTGGCTGGATACCTCTATCACATCCGGCAGATGTGTTTCC CAAGACCCATTCGTTGTCTACCGTGGGCGAAAGATCCCTTCTCCCCCAACGACAGTGTCAGAAAATAAGCAAGAC TTACTTAAACAGAAATCAAATCAAATAATCCAGCGTGCAAAGGAAGATGCTGGTGTACCAACGCCACGAGCTCCT CCTCCGGACCACATTCATGCACGGCGCTCAAAAGAACCCCCTGACAGATCTTCCCAGCACCCCCGACCGACGCTA TACCGAAAGACAACCTCGGAACATGAAATGGATGAATCTAACGCACCCTCACAACCAGACTGGGTCCGTGACCAA GTCATATTCGCATGCCTGCGCTCAGCACCCTTACACCCTCCAAACGAAGATTTTATCTTGCAACTCGTGAAAATA AGACGTATTCGCGAACTCACCATCGACAAGATCGGCGTGCGCGCATATAGTACCGCCATCGCAGCATTGGCAGCA TACCCATATCCCATCCAACGGCCGAGCGAGATCCTCGCTTTACCCGGGTGCAACGCCAAGATTGCGGACTTGTTC GCGCAGTTCCAACAACATGGTGGCTGCGAGCATACCGACGACGACGGGAACGTTGCCGCTGCCGACTCGCTGGAG AAAGATCCTATTCTCCGGGTTCTGAACTCGTTCTTTCAGATATGGGGTGTTGGGGCTAAGACAGCACGCGAGTTT TACCAGCGTGGGTGGCGCGACCTCGATGATATTGTCGAGCATGGGTGGGATACGCTCTCGCGTGTACAGCAGATT GGAGTGAAATTCTACGAGGAGTTCCAGGAAGGTATTCCCCGTGCTGAGAGCGAGGGTATTGCTACTGTGATTCAG GATCATGCTGCTCGGGTTCGGGCGGAAGATGCAAATGGAATTGAGTGTGTGATTGTTGGCGGATACCGGCGTGGG AAGCAAGTTAGTGGTGATGTTGATGTTATCTTGAGTCATCGTGATGATGCGGTGACTCGGAATCTGATTGTTGAT CTTGTTGCGAGTCTTGAAGCTGAACGATATATCACTCATACGCTCTCGTTGCATTTGACTTCTTCGCTGCGCGAG CAACAGACGTTGCCTTTTCATGGTGATGATACAAGGAAATTCGATACTTTGGACAAGGCACTGGTTGTCTGGCAA GACCCACACTTCGATGCTACAGCTGTTGAACATAATGACCGTCAGGTGAAAAATCCAAACATCCATCGTCGTGTC GATATCATTATATCGCCTTGGCGCACGGTCGGTTGCGCGATACTCGGCTGGTCTGGTGATCTGACTTTTCAGCGA GATCTACGGCGGTATGCGAAGAAAGCACGCTTCTTGAAGTTCGATTCGAGTGGTGTGAGAGACCGAGGTACTGGA AGACAAGTTGACCTCGAAGAAGATGGAGAGACATGGGAGGAGAGGGAGAAACTTGTGATGGAGGGACTGGGAATA GGCTGGAGACCACCAGAAGAACGCTGCTCGAGATAG |