Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4242.t1
Gene name
Locationscaffold_08:445088..446360
Strand-
Gene length (bp)1272
Transcript length (bp)1125
Coding sequence length (bp)1125
Protein length (aa) 375

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13445 zf-RING_UBOX RING-type zinc-finger 4.8E-04 251 284

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4242.t1
MAHSKRNTSLPHFTSYERGLLRSTWGTKRSAIGRDSFLSFGSCRLCLQPARAPVVACASNGDLFCRECAINDLLS
QRQEIKRLEKERDEARKRIAEDEERSLAEMKERDLRDFELVSMGLENKGGKKRKAEESEALEKFKAREVEVDGKR
KRVFELGEEEMARLAGEEKERLRMELKMEKSASKSALPSFWVPSLTPNTDANEIAANKTVKLTPVCPGSTDESRH
SYSLKSLVEVNFTEEKASDGTVSRVCPSCTKNLSNGLKAMLTKPCGHVICSPCVTKFMTPHEHHIPDPHASKEEQ
EKTAALHGQVLCFVCETDLTAKSQPDHGNGNNKKSKKKDRDAIQPGLVEISSEGTGFASKGGSMGKKTGVAFQC*
Coding >Pro_DTO377G3_2|g4242.t1
ATGGCGCATTCAAAGCGAAATACCTCCCTCCCACACTTTACCTCCTACGAACGCGGTCTTCTACGCTCAACCTGG
GGCACAAAACGCAGCGCAATCGGCCGCGACAGCTTCCTAAGCTTTGGCTCCTGCCGTCTATGTCTGCAACCCGCG
CGGGCGCCTGTAGTCGCATGCGCCAGTAACGGCGACCTCTTCTGCCGCGAATGTGCGATCAACGACCTCCTCTCT
CAACGGCAGGAGATCAAGCGGCTTGAAAAAGAGCGCGACGAGGCGAGAAAACGCATCGCAGAGGATGAGGAGCGC
TCGCTGGCGGAGATGAAGGAGAGAGATCTCAGGGATTTCGAGCTTGTTTCCATGGGTTTAGAGAATAAAGGTGGG
AAGAAGCGCAAGGCGGAGGAGTCTGAGGCTTTGGAGAAGTTCAAGGCTAGGGAGGTTGAGGTTGATGGGAAGAGG
AAGAGGGTTTTTGAGCTCGGGGAGGAGGAGATGGCTCGTCTTGCTGGGGAGGAGAAGGAGAGGTTGAGGATGGAG
TTGAAGATGGAGAAGTCGGCTAGCAAATCTGCTCTCCCGTCTTTCTGGGTTCCATCTTTAACACCCAACACTGAT
GCGAATGAAATCGCCGCCAACAAGACCGTCAAGTTGACGCCTGTCTGTCCTGGCTCGACGGATGAGAGCCGACAT
AGCTACTCGCTCAAGTCGCTTGTTGAGGTTAATTTCACGGAGGAGAAGGCTTCCGATGGGACTGTGTCTAGGGTG
TGTCCGAGTTGCACGAAAAATTTAAGCAATGGGCTCAAAGCGATGCTCACAAAGCCCTGCGGGCATGTCATTTGC
TCTCCGTGTGTAACGAAATTCATGACCCCCCACGAACACCACATCCCTGATCCACATGCCTCGAAAGAGGAGCAG
GAGAAGACTGCAGCTCTCCATGGTCAGGTTTTATGTTTCGTCTGTGAGACAGATCTTACGGCGAAGTCACAACCA
GATCACGGGAATGGGAATAACAAGAAGTCTAAGAAAAAGGATAGGGATGCTATTCAGCCTGGTCTGGTGGAGATC
TCCTCCGAGGGGACTGGGTTTGCTAGCAAAGGTGGGAGCATGGGGAAGAAGACCGGGGTTGCGTTCCAGTGCTGA
Transcript >Pro_DTO377G3_2|g4242.t1
ATGGCGCATTCAAAGCGAAATACCTCCCTCCCACACTTTACCTCCTACGAACGCGGTCTTCTACGCTCAACCTGG
GGCACAAAACGCAGCGCAATCGGCCGCGACAGCTTCCTAAGCTTTGGCTCCTGCCGTCTATGTCTGCAACCCGCG
CGGGCGCCTGTAGTCGCATGCGCCAGTAACGGCGACCTCTTCTGCCGCGAATGTGCGATCAACGACCTCCTCTCT
CAACGGCAGGAGATCAAGCGGCTTGAAAAAGAGCGCGACGAGGCGAGAAAACGCATCGCAGAGGATGAGGAGCGC
TCGCTGGCGGAGATGAAGGAGAGAGATCTCAGGGATTTCGAGCTTGTTTCCATGGGTTTAGAGAATAAAGGTGGG
AAGAAGCGCAAGGCGGAGGAGTCTGAGGCTTTGGAGAAGTTCAAGGCTAGGGAGGTTGAGGTTGATGGGAAGAGG
AAGAGGGTTTTTGAGCTCGGGGAGGAGGAGATGGCTCGTCTTGCTGGGGAGGAGAAGGAGAGGTTGAGGATGGAG
TTGAAGATGGAGAAGTCGGCTAGCAAATCTGCTCTCCCGTCTTTCTGGGTTCCATCTTTAACACCCAACACTGAT
GCGAATGAAATCGCCGCCAACAAGACCGTCAAGTTGACGCCTGTCTGTCCTGGCTCGACGGATGAGAGCCGACAT
AGCTACTCGCTCAAGTCGCTTGTTGAGGTTAATTTCACGGAGGAGAAGGCTTCCGATGGGACTGTGTCTAGGGTG
TGTCCGAGTTGCACGAAAAATTTAAGCAATGGGCTCAAAGCGATGCTCACAAAGCCCTGCGGGCATGTCATTTGC
TCTCCGTGTGTAACGAAATTCATGACCCCCCACGAACACCACATCCCTGATCCACATGCCTCGAAAGAGGAGCAG
GAGAAGACTGCAGCTCTCCATGGTCAGGTTTTATGTTTCGTCTGTGAGACAGATCTTACGGCGAAGTCACAACCA
GATCACGGGAATGGGAATAACAAGAAGTCTAAGAAAAAGGATAGGGATGCTATTCAGCCTGGTCTGGTGGAGATC
TCCTCCGAGGGGACTGGGTTTGCTAGCAAAGGTGGGAGCATGGGGAAGAAGACCGGGGTTGCGTTCCAGTGCTGA
Gene >Pro_DTO377G3_2|g4242.t1
ATGGCGCATTCAAAGCGAAATACCTCCCTCCCACACTTTACCTCCTACGAACGCGGTCTTCTACGCTCAACCTGG
GGCACAAAACGCAGCGCAATCGGCCGCGACAGCTTCCTAAGCTTTGGCTCCTGCCGTCTATGTCTGCAACCCGCG
CGGGCGCCTGTAGTCGCATGCGCCAGTAACGGCGACCTCTTCTGCCGCGAATGTGCGATCAACGACCTCCTCTCT
CAACGGCAGGAGATCAAGCGGCTTGAAAAAGAGCGCGACGAGGCGAGAAAACGCATCGCAGAGGATGAGGAGCGC
TCGCTGGCGGAGATGAAGGAGAGAGATCTCAGGGATTTCGAGCTTGTTTCCATGGGTTTAGAGAATAAAGGTGGG
AAGAAGCGCAAGGCGGAGGAGTCTGAGGCTTTGGAGAAGTTCAAGGCTAGGGAGGTTGAGGTTGATGGGAAGAGG
AAGAGGGTTTTTGAGCTCGGGGAGGAGGAGATGGCTCGTCTTGCTGGGGAGGAGAAGGAGAGGTTGAGGATGGAG
TTGAAGATGGAGAAGGTTTGTGGTCATTCTTTGGGCTGGAGCTTGAAGCTTGAAGCCTCGGTCTTCGATTGGAGA
TTTGTTTTGAACTAACAAATTTGCTCTAGTCGGCTAGCAAATCTGCTCTCCCGTCTTTCTGGGTTCCATCTTTAA
CACCCAACACTGATGCGAATGAAATCGCCGCCAACAAGACCGTCAAGTTGACGCCTGTCTGTCCTGGCTCGACGG
ATGAGAGCCGACATAGCTACTCGCTCAAGTCGCTTGTTGAGGTTAATTTCACGGAGGAGAAGGCTTCCGATGGGA
CTGTGTCTAGGGTGTGTCCGAGTTGCACGAAAAATTTAAGCAATGGGCTCAAAGCGATGCGTATGTGGAGTAGAA
GTTGGTACAGCCATTGGGTTTTGCTAATTATGTCTCATGACAGTCACAAAGCCCTGCGGGCATGTCATTTGCTCT
CCGTGTGTAACGAAATTCATGACCCCCCACGAACACCACATCCCTGATCCACATGCCTCGAAAGAGGAGCAGGAG
AAGACTGCAGCTCTCCATGGTCAGGTTTTATGTTTCGTCTGTGAGACAGATCTTACGGCGAAGTCACAACCAGAT
CACGGGAATGGGAATAACAAGAAGTCTAAGAAAAAGGATAGGGATGCTATTCAGCCTGGTCTGGTGGAGATCTCC
TCCGAGGGGACTGGGTTTGCTAGCAAAGGTGGGAGCATGGGGAAGAAGACCGGGGTTGCGTTCCAGTGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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