Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4212.t1
Gene name
Locationscaffold_08:361983..363786
Strand+
Gene length (bp)1803
Transcript length (bp)1803
Coding sequence length (bp)1803
Protein length (aa) 601

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00270 DEAD DEAD/DEAH box helicase 5.9E-30 134 359
PF00271 Helicase_C Helicase conserved C-terminal domain 8.6E-19 435 568
PF04851 ResIII Type III restriction enzyme, res subunit 7.6E-05 134 355

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0016787 hydrolase activity Yes
GO:0003677 DNA binding Yes
GO:0005524 ATP binding Yes
GO:0030554 adenyl nucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0032553 ribonucleotide binding No
GO:0003824 catalytic activity No
GO:0032559 adenyl ribonucleotide binding No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No
GO:0017076 purine nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0008144 drug binding No
GO:0003674 molecular_function No
GO:0000166 nucleotide binding No
GO:0043167 ion binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0005488 binding No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4212.t1
MATVRLRRKAARMALSPTVSKPSLPSPNKPRRERAGPFASMNQTQARIRDTPRTRSQAALKRSGEEGKMEKKESP
LYRALKMQTTLTAVPYGRRSAIKARLADITSFDHFPLLPAVRQSIFGQALAGLTDVTPTPIQRLAIPELLLDESK
KKKKVNKANEDEEEYNFDQYLLAAETGSGKTLAYLLPIVDAIKRAEVLDIEEEKVLEEQKAREREERMKNKAFDL
DPEEPPMTNAARPRAIILVPTSELVSQVGSQLKELAHTVKYRSGEISSTFTPRRIKNTLFHPAGIDILVSTPHLL
SSVARSNPNILSRVTHLVLDEADSLMDRSFIPTTSEIIAKVAPSLKKLILCSATIPRSLDNQLRKRFPDLQRLTT
PNLHAIPRRVQLGVVDIEKEPYRGNRNLACADVIWSIGKAGDRHEHTETWGPLNAYMEPKVKKIIVFVNEREEAD
EVASFLQSKGIDAVSLSRDTDSRKQQETLSQFTEVKLPPTAEEIMINKKKNRAAGSIPFELPERQEPIRRLPDTK
VLVTTDIASRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMGKRGRGVVLVGKKDRKDVVREVREGMFRGQALI
*
Coding >Pro_DTO377G3_2|g4212.t1
ATGGCCACCGTTCGATTGCGTCGCAAGGCTGCTCGGATGGCCCTGTCGCCCACTGTTTCCAAACCATCTCTTCCA
TCTCCTAACAAGCCACGACGGGAACGGGCCGGTCCCTTTGCCTCGATGAACCAGACCCAGGCACGGATTCGAGAC
ACACCACGCACACGATCACAGGCGGCCCTCAAGCGTTCAGGGGAGGAGGGCAAGATGGAAAAGAAGGAGAGCCCA
TTGTACAGAGCTTTGAAGATGCAGACAACGTTGACAGCTGTGCCTTATGGTCGACGTTCCGCTATAAAAGCTCGA
CTTGCCGACATCACTAGTTTCGACCACTTCCCTCTCCTTCCCGCAGTTCGACAGTCAATATTCGGCCAGGCTCTG
GCCGGTCTAACTGATGTTACCCCCACACCCATTCAAAGACTCGCGATTCCCGAATTGTTACTAGATGAATCCAAG
AAGAAGAAGAAAGTGAACAAGGCGAATGAAGATGAAGAAGAATACAATTTTGACCAGTATCTCCTGGCAGCAGAG
ACCGGTTCGGGAAAGACTCTCGCATACTTGCTTCCAATTGTTGATGCTATCAAGCGTGCTGAAGTCCTCGATATA
GAGGAGGAGAAAGTCCTCGAGGAACAAAAGGCGCGAGAGCGGGAGGAGAGAATGAAGAACAAGGCGTTCGATCTG
GATCCCGAGGAGCCGCCAATGACAAACGCCGCTCGTCCTCGGGCTATCATCCTCGTTCCTACCTCCGAATTGGTA
TCTCAAGTTGGATCGCAGCTCAAAGAGTTGGCCCATACTGTCAAGTACCGCTCTGGCGAAATCTCATCAACTTTC
ACTCCCCGCCGGATCAAGAACACCCTATTCCACCCCGCCGGCATCGATATTCTAGTTTCAACTCCTCACCTTTTG
AGCTCTGTTGCGAGATCGAATCCCAATATCCTCAGCCGAGTCACTCACCTTGTACTCGACGAGGCCGACTCCTTA
ATGGACCGCTCGTTCATCCCGACAACGTCCGAAATCATTGCCAAGGTTGCTCCGTCACTCAAAAAGTTGATTCTC
TGCTCCGCCACCATCCCCCGCAGTCTCGACAACCAGCTGCGCAAGCGCTTCCCTGATCTGCAACGCCTGACGACC
CCGAACCTACATGCCATTCCTCGTCGCGTACAGCTAGGTGTCGTTGACATTGAGAAGGAGCCATACCGCGGAAAT
CGAAACCTTGCCTGTGCTGATGTCATCTGGTCAATCGGCAAGGCAGGAGATAGACACGAACATACCGAGACATGG
GGACCGCTCAATGCGTACATGGAGCCGAAGGTTAAGAAGATTATCGTGTTCGTCAACGAACGTGAGGAAGCCGAT
GAGGTCGCTAGTTTCCTGCAATCCAAGGGCATCGATGCTGTCTCGCTATCTCGCGACACCGATTCCCGGAAGCAA
CAAGAGACCCTCTCGCAGTTCACAGAGGTTAAGCTTCCACCGACTGCGGAGGAGATCATGATTAATAAGAAGAAG
AACCGCGCCGCCGGAAGCATTCCCTTCGAACTTCCTGAGCGCCAAGAGCCCATTCGCCGCCTTCCCGACACAAAG
GTTCTTGTCACTACCGATATCGCCTCCCGTGGTATTGATACCCTGGCAGTGAAGACAGTAATTCTCTACCATGTG
CCGCACACTACCATCGACTTTATCCACCGACTAGGCCGTCTCGGTCGTATGGGCAAGCGTGGTCGTGGTGTTGTC
CTGGTGGGCAAGAAGGACCGTAAGGACGTTGTCCGTGAGGTTCGCGAGGGCATGTTCCGTGGCCAGGCTTTGATC
TAG
Transcript >Pro_DTO377G3_2|g4212.t1
ATGGCCACCGTTCGATTGCGTCGCAAGGCTGCTCGGATGGCCCTGTCGCCCACTGTTTCCAAACCATCTCTTCCA
TCTCCTAACAAGCCACGACGGGAACGGGCCGGTCCCTTTGCCTCGATGAACCAGACCCAGGCACGGATTCGAGAC
ACACCACGCACACGATCACAGGCGGCCCTCAAGCGTTCAGGGGAGGAGGGCAAGATGGAAAAGAAGGAGAGCCCA
TTGTACAGAGCTTTGAAGATGCAGACAACGTTGACAGCTGTGCCTTATGGTCGACGTTCCGCTATAAAAGCTCGA
CTTGCCGACATCACTAGTTTCGACCACTTCCCTCTCCTTCCCGCAGTTCGACAGTCAATATTCGGCCAGGCTCTG
GCCGGTCTAACTGATGTTACCCCCACACCCATTCAAAGACTCGCGATTCCCGAATTGTTACTAGATGAATCCAAG
AAGAAGAAGAAAGTGAACAAGGCGAATGAAGATGAAGAAGAATACAATTTTGACCAGTATCTCCTGGCAGCAGAG
ACCGGTTCGGGAAAGACTCTCGCATACTTGCTTCCAATTGTTGATGCTATCAAGCGTGCTGAAGTCCTCGATATA
GAGGAGGAGAAAGTCCTCGAGGAACAAAAGGCGCGAGAGCGGGAGGAGAGAATGAAGAACAAGGCGTTCGATCTG
GATCCCGAGGAGCCGCCAATGACAAACGCCGCTCGTCCTCGGGCTATCATCCTCGTTCCTACCTCCGAATTGGTA
TCTCAAGTTGGATCGCAGCTCAAAGAGTTGGCCCATACTGTCAAGTACCGCTCTGGCGAAATCTCATCAACTTTC
ACTCCCCGCCGGATCAAGAACACCCTATTCCACCCCGCCGGCATCGATATTCTAGTTTCAACTCCTCACCTTTTG
AGCTCTGTTGCGAGATCGAATCCCAATATCCTCAGCCGAGTCACTCACCTTGTACTCGACGAGGCCGACTCCTTA
ATGGACCGCTCGTTCATCCCGACAACGTCCGAAATCATTGCCAAGGTTGCTCCGTCACTCAAAAAGTTGATTCTC
TGCTCCGCCACCATCCCCCGCAGTCTCGACAACCAGCTGCGCAAGCGCTTCCCTGATCTGCAACGCCTGACGACC
CCGAACCTACATGCCATTCCTCGTCGCGTACAGCTAGGTGTCGTTGACATTGAGAAGGAGCCATACCGCGGAAAT
CGAAACCTTGCCTGTGCTGATGTCATCTGGTCAATCGGCAAGGCAGGAGATAGACACGAACATACCGAGACATGG
GGACCGCTCAATGCGTACATGGAGCCGAAGGTTAAGAAGATTATCGTGTTCGTCAACGAACGTGAGGAAGCCGAT
GAGGTCGCTAGTTTCCTGCAATCCAAGGGCATCGATGCTGTCTCGCTATCTCGCGACACCGATTCCCGGAAGCAA
CAAGAGACCCTCTCGCAGTTCACAGAGGTTAAGCTTCCACCGACTGCGGAGGAGATCATGATTAATAAGAAGAAG
AACCGCGCCGCCGGAAGCATTCCCTTCGAACTTCCTGAGCGCCAAGAGCCCATTCGCCGCCTTCCCGACACAAAG
GTTCTTGTCACTACCGATATCGCCTCCCGTGGTATTGATACCCTGGCAGTGAAGACAGTAATTCTCTACCATGTG
CCGCACACTACCATCGACTTTATCCACCGACTAGGCCGTCTCGGTCGTATGGGCAAGCGTGGTCGTGGTGTTGTC
CTGGTGGGCAAGAAGGACCGTAAGGACGTTGTCCGTGAGGTTCGCGAGGGCATGTTCCGTGGCCAGGCTTTGATC
TAG
Gene >Pro_DTO377G3_2|g4212.t1
ATGGCCACCGTTCGATTGCGTCGCAAGGCTGCTCGGATGGCCCTGTCGCCCACTGTTTCCAAACCATCTCTTCCA
TCTCCTAACAAGCCACGACGGGAACGGGCCGGTCCCTTTGCCTCGATGAACCAGACCCAGGCACGGATTCGAGAC
ACACCACGCACACGATCACAGGCGGCCCTCAAGCGTTCAGGGGAGGAGGGCAAGATGGAAAAGAAGGAGAGCCCA
TTGTACAGAGCTTTGAAGATGCAGACAACGTTGACAGCTGTGCCTTATGGTCGACGTTCCGCTATAAAAGCTCGA
CTTGCCGACATCACTAGTTTCGACCACTTCCCTCTCCTTCCCGCAGTTCGACAGTCAATATTCGGCCAGGCTCTG
GCCGGTCTAACTGATGTTACCCCCACACCCATTCAAAGACTCGCGATTCCCGAATTGTTACTAGATGAATCCAAG
AAGAAGAAGAAAGTGAACAAGGCGAATGAAGATGAAGAAGAATACAATTTTGACCAGTATCTCCTGGCAGCAGAG
ACCGGTTCGGGAAAGACTCTCGCATACTTGCTTCCAATTGTTGATGCTATCAAGCGTGCTGAAGTCCTCGATATA
GAGGAGGAGAAAGTCCTCGAGGAACAAAAGGCGCGAGAGCGGGAGGAGAGAATGAAGAACAAGGCGTTCGATCTG
GATCCCGAGGAGCCGCCAATGACAAACGCCGCTCGTCCTCGGGCTATCATCCTCGTTCCTACCTCCGAATTGGTA
TCTCAAGTTGGATCGCAGCTCAAAGAGTTGGCCCATACTGTCAAGTACCGCTCTGGCGAAATCTCATCAACTTTC
ACTCCCCGCCGGATCAAGAACACCCTATTCCACCCCGCCGGCATCGATATTCTAGTTTCAACTCCTCACCTTTTG
AGCTCTGTTGCGAGATCGAATCCCAATATCCTCAGCCGAGTCACTCACCTTGTACTCGACGAGGCCGACTCCTTA
ATGGACCGCTCGTTCATCCCGACAACGTCCGAAATCATTGCCAAGGTTGCTCCGTCACTCAAAAAGTTGATTCTC
TGCTCCGCCACCATCCCCCGCAGTCTCGACAACCAGCTGCGCAAGCGCTTCCCTGATCTGCAACGCCTGACGACC
CCGAACCTACATGCCATTCCTCGTCGCGTACAGCTAGGTGTCGTTGACATTGAGAAGGAGCCATACCGCGGAAAT
CGAAACCTTGCCTGTGCTGATGTCATCTGGTCAATCGGCAAGGCAGGAGATAGACACGAACATACCGAGACATGG
GGACCGCTCAATGCGTACATGGAGCCGAAGGTTAAGAAGATTATCGTGTTCGTCAACGAACGTGAGGAAGCCGAT
GAGGTCGCTAGTTTCCTGCAATCCAAGGGCATCGATGCTGTCTCGCTATCTCGCGACACCGATTCCCGGAAGCAA
CAAGAGACCCTCTCGCAGTTCACAGAGGTTAAGCTTCCACCGACTGCGGAGGAGATCATGATTAATAAGAAGAAG
AACCGCGCCGCCGGAAGCATTCCCTTCGAACTTCCTGAGCGCCAAGAGCCCATTCGCCGCCTTCCCGACACAAAG
GTTCTTGTCACTACCGATATCGCCTCCCGTGGTATTGATACCCTGGCAGTGAAGACAGTAATTCTCTACCATGTG
CCGCACACTACCATCGACTTTATCCACCGACTAGGCCGTCTCGGTCGTATGGGCAAGCGTGGTCGTGGTGTTGTC
CTGGTGGGCAAGAAGGACCGTAAGGACGTTGTCCGTGAGGTTCGCGAGGGCATGTTCCGTGGCCAGGCTTTGATC
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail