Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g4212.t1
Gene name
Location	scaffold_08:361983..363786
Strand	+
Gene length (bp)	1803
Transcript length (bp)	1803
Coding sequence length (bp)	1803
Protein length (aa)	601

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00270	DEAD	DEAD/DEAH box helicase	5.9E-30	134	359
PF00271	Helicase_C	Helicase conserved C-terminal domain	8.6E-19	435	568
PF04851	ResIII	Type III restriction enzyme, res subunit	7.6E-05	134	355

GO

GO Term	Description	Terminal node
GO:0003676	nucleic acid binding	Yes
GO:0016787	hydrolase activity	Yes
GO:0003677	DNA binding	Yes
GO:0005524	ATP binding	Yes
GO:0030554	adenyl nucleotide binding	No
GO:1901363	heterocyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:0097159	organic cyclic compound binding	No
GO:0032553	ribonucleotide binding	No
GO:0003824	catalytic activity	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0043168	anion binding	No
GO:1901265	nucleoside phosphate binding	No
GO:0017076	purine nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0008144	drug binding	No
GO:0003674	molecular_function	No
GO:0000166	nucleotide binding	No
GO:0043167	ion binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0005488	binding	No
GO:0036094	small molecule binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 13	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g4212.t1 MATVRLRRKAARMALSPTVSKPSLPSPNKPRRERAGPFASMNQTQARIRDTPRTRSQAALKRSGEEGKMEKKESP LYRALKMQTTLTAVPYGRRSAIKARLADITSFDHFPLLPAVRQSIFGQALAGLTDVTPTPIQRLAIPELLLDESK KKKKVNKANEDEEEYNFDQYLLAAETGSGKTLAYLLPIVDAIKRAEVLDIEEEKVLEEQKAREREERMKNKAFDL DPEEPPMTNAARPRAIILVPTSELVSQVGSQLKELAHTVKYRSGEISSTFTPRRIKNTLFHPAGIDILVSTPHLL SSVARSNPNILSRVTHLVLDEADSLMDRSFIPTTSEIIAKVAPSLKKLILCSATIPRSLDNQLRKRFPDLQRLTT PNLHAIPRRVQLGVVDIEKEPYRGNRNLACADVIWSIGKAGDRHEHTETWGPLNAYMEPKVKKIIVFVNEREEAD EVASFLQSKGIDAVSLSRDTDSRKQQETLSQFTEVKLPPTAEEIMINKKKNRAAGSIPFELPERQEPIRRLPDTK VLVTTDIASRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMGKRGRGVVLVGKKDRKDVVREVREGMFRGQALI *
Coding	>Pro_DTO377G3_2\|g4212.t1 ATGGCCACCGTTCGATTGCGTCGCAAGGCTGCTCGGATGGCCCTGTCGCCCACTGTTTCCAAACCATCTCTTCCA TCTCCTAACAAGCCACGACGGGAACGGGCCGGTCCCTTTGCCTCGATGAACCAGACCCAGGCACGGATTCGAGAC ACACCACGCACACGATCACAGGCGGCCCTCAAGCGTTCAGGGGAGGAGGGCAAGATGGAAAAGAAGGAGAGCCCA TTGTACAGAGCTTTGAAGATGCAGACAACGTTGACAGCTGTGCCTTATGGTCGACGTTCCGCTATAAAAGCTCGA CTTGCCGACATCACTAGTTTCGACCACTTCCCTCTCCTTCCCGCAGTTCGACAGTCAATATTCGGCCAGGCTCTG GCCGGTCTAACTGATGTTACCCCCACACCCATTCAAAGACTCGCGATTCCCGAATTGTTACTAGATGAATCCAAG AAGAAGAAGAAAGTGAACAAGGCGAATGAAGATGAAGAAGAATACAATTTTGACCAGTATCTCCTGGCAGCAGAG ACCGGTTCGGGAAAGACTCTCGCATACTTGCTTCCAATTGTTGATGCTATCAAGCGTGCTGAAGTCCTCGATATA GAGGAGGAGAAAGTCCTCGAGGAACAAAAGGCGCGAGAGCGGGAGGAGAGAATGAAGAACAAGGCGTTCGATCTG GATCCCGAGGAGCCGCCAATGACAAACGCCGCTCGTCCTCGGGCTATCATCCTCGTTCCTACCTCCGAATTGGTA TCTCAAGTTGGATCGCAGCTCAAAGAGTTGGCCCATACTGTCAAGTACCGCTCTGGCGAAATCTCATCAACTTTC ACTCCCCGCCGGATCAAGAACACCCTATTCCACCCCGCCGGCATCGATATTCTAGTTTCAACTCCTCACCTTTTG AGCTCTGTTGCGAGATCGAATCCCAATATCCTCAGCCGAGTCACTCACCTTGTACTCGACGAGGCCGACTCCTTA ATGGACCGCTCGTTCATCCCGACAACGTCCGAAATCATTGCCAAGGTTGCTCCGTCACTCAAAAAGTTGATTCTC TGCTCCGCCACCATCCCCCGCAGTCTCGACAACCAGCTGCGCAAGCGCTTCCCTGATCTGCAACGCCTGACGACC CCGAACCTACATGCCATTCCTCGTCGCGTACAGCTAGGTGTCGTTGACATTGAGAAGGAGCCATACCGCGGAAAT CGAAACCTTGCCTGTGCTGATGTCATCTGGTCAATCGGCAAGGCAGGAGATAGACACGAACATACCGAGACATGG GGACCGCTCAATGCGTACATGGAGCCGAAGGTTAAGAAGATTATCGTGTTCGTCAACGAACGTGAGGAAGCCGAT GAGGTCGCTAGTTTCCTGCAATCCAAGGGCATCGATGCTGTCTCGCTATCTCGCGACACCGATTCCCGGAAGCAA CAAGAGACCCTCTCGCAGTTCACAGAGGTTAAGCTTCCACCGACTGCGGAGGAGATCATGATTAATAAGAAGAAG AACCGCGCCGCCGGAAGCATTCCCTTCGAACTTCCTGAGCGCCAAGAGCCCATTCGCCGCCTTCCCGACACAAAG GTTCTTGTCACTACCGATATCGCCTCCCGTGGTATTGATACCCTGGCAGTGAAGACAGTAATTCTCTACCATGTG CCGCACACTACCATCGACTTTATCCACCGACTAGGCCGTCTCGGTCGTATGGGCAAGCGTGGTCGTGGTGTTGTC CTGGTGGGCAAGAAGGACCGTAAGGACGTTGTCCGTGAGGTTCGCGAGGGCATGTTCCGTGGCCAGGCTTTGATC TAG
Transcript	>Pro_DTO377G3_2\|g4212.t1 ATGGCCACCGTTCGATTGCGTCGCAAGGCTGCTCGGATGGCCCTGTCGCCCACTGTTTCCAAACCATCTCTTCCA TCTCCTAACAAGCCACGACGGGAACGGGCCGGTCCCTTTGCCTCGATGAACCAGACCCAGGCACGGATTCGAGAC ACACCACGCACACGATCACAGGCGGCCCTCAAGCGTTCAGGGGAGGAGGGCAAGATGGAAAAGAAGGAGAGCCCA TTGTACAGAGCTTTGAAGATGCAGACAACGTTGACAGCTGTGCCTTATGGTCGACGTTCCGCTATAAAAGCTCGA CTTGCCGACATCACTAGTTTCGACCACTTCCCTCTCCTTCCCGCAGTTCGACAGTCAATATTCGGCCAGGCTCTG GCCGGTCTAACTGATGTTACCCCCACACCCATTCAAAGACTCGCGATTCCCGAATTGTTACTAGATGAATCCAAG AAGAAGAAGAAAGTGAACAAGGCGAATGAAGATGAAGAAGAATACAATTTTGACCAGTATCTCCTGGCAGCAGAG ACCGGTTCGGGAAAGACTCTCGCATACTTGCTTCCAATTGTTGATGCTATCAAGCGTGCTGAAGTCCTCGATATA GAGGAGGAGAAAGTCCTCGAGGAACAAAAGGCGCGAGAGCGGGAGGAGAGAATGAAGAACAAGGCGTTCGATCTG GATCCCGAGGAGCCGCCAATGACAAACGCCGCTCGTCCTCGGGCTATCATCCTCGTTCCTACCTCCGAATTGGTA TCTCAAGTTGGATCGCAGCTCAAAGAGTTGGCCCATACTGTCAAGTACCGCTCTGGCGAAATCTCATCAACTTTC ACTCCCCGCCGGATCAAGAACACCCTATTCCACCCCGCCGGCATCGATATTCTAGTTTCAACTCCTCACCTTTTG AGCTCTGTTGCGAGATCGAATCCCAATATCCTCAGCCGAGTCACTCACCTTGTACTCGACGAGGCCGACTCCTTA ATGGACCGCTCGTTCATCCCGACAACGTCCGAAATCATTGCCAAGGTTGCTCCGTCACTCAAAAAGTTGATTCTC TGCTCCGCCACCATCCCCCGCAGTCTCGACAACCAGCTGCGCAAGCGCTTCCCTGATCTGCAACGCCTGACGACC CCGAACCTACATGCCATTCCTCGTCGCGTACAGCTAGGTGTCGTTGACATTGAGAAGGAGCCATACCGCGGAAAT CGAAACCTTGCCTGTGCTGATGTCATCTGGTCAATCGGCAAGGCAGGAGATAGACACGAACATACCGAGACATGG GGACCGCTCAATGCGTACATGGAGCCGAAGGTTAAGAAGATTATCGTGTTCGTCAACGAACGTGAGGAAGCCGAT GAGGTCGCTAGTTTCCTGCAATCCAAGGGCATCGATGCTGTCTCGCTATCTCGCGACACCGATTCCCGGAAGCAA CAAGAGACCCTCTCGCAGTTCACAGAGGTTAAGCTTCCACCGACTGCGGAGGAGATCATGATTAATAAGAAGAAG AACCGCGCCGCCGGAAGCATTCCCTTCGAACTTCCTGAGCGCCAAGAGCCCATTCGCCGCCTTCCCGACACAAAG GTTCTTGTCACTACCGATATCGCCTCCCGTGGTATTGATACCCTGGCAGTGAAGACAGTAATTCTCTACCATGTG CCGCACACTACCATCGACTTTATCCACCGACTAGGCCGTCTCGGTCGTATGGGCAAGCGTGGTCGTGGTGTTGTC CTGGTGGGCAAGAAGGACCGTAAGGACGTTGTCCGTGAGGTTCGCGAGGGCATGTTCCGTGGCCAGGCTTTGATC TAG
Gene	>Pro_DTO377G3_2\|g4212.t1 ATGGCCACCGTTCGATTGCGTCGCAAGGCTGCTCGGATGGCCCTGTCGCCCACTGTTTCCAAACCATCTCTTCCA TCTCCTAACAAGCCACGACGGGAACGGGCCGGTCCCTTTGCCTCGATGAACCAGACCCAGGCACGGATTCGAGAC ACACCACGCACACGATCACAGGCGGCCCTCAAGCGTTCAGGGGAGGAGGGCAAGATGGAAAAGAAGGAGAGCCCA TTGTACAGAGCTTTGAAGATGCAGACAACGTTGACAGCTGTGCCTTATGGTCGACGTTCCGCTATAAAAGCTCGA CTTGCCGACATCACTAGTTTCGACCACTTCCCTCTCCTTCCCGCAGTTCGACAGTCAATATTCGGCCAGGCTCTG GCCGGTCTAACTGATGTTACCCCCACACCCATTCAAAGACTCGCGATTCCCGAATTGTTACTAGATGAATCCAAG AAGAAGAAGAAAGTGAACAAGGCGAATGAAGATGAAGAAGAATACAATTTTGACCAGTATCTCCTGGCAGCAGAG ACCGGTTCGGGAAAGACTCTCGCATACTTGCTTCCAATTGTTGATGCTATCAAGCGTGCTGAAGTCCTCGATATA GAGGAGGAGAAAGTCCTCGAGGAACAAAAGGCGCGAGAGCGGGAGGAGAGAATGAAGAACAAGGCGTTCGATCTG GATCCCGAGGAGCCGCCAATGACAAACGCCGCTCGTCCTCGGGCTATCATCCTCGTTCCTACCTCCGAATTGGTA TCTCAAGTTGGATCGCAGCTCAAAGAGTTGGCCCATACTGTCAAGTACCGCTCTGGCGAAATCTCATCAACTTTC ACTCCCCGCCGGATCAAGAACACCCTATTCCACCCCGCCGGCATCGATATTCTAGTTTCAACTCCTCACCTTTTG AGCTCTGTTGCGAGATCGAATCCCAATATCCTCAGCCGAGTCACTCACCTTGTACTCGACGAGGCCGACTCCTTA ATGGACCGCTCGTTCATCCCGACAACGTCCGAAATCATTGCCAAGGTTGCTCCGTCACTCAAAAAGTTGATTCTC TGCTCCGCCACCATCCCCCGCAGTCTCGACAACCAGCTGCGCAAGCGCTTCCCTGATCTGCAACGCCTGACGACC CCGAACCTACATGCCATTCCTCGTCGCGTACAGCTAGGTGTCGTTGACATTGAGAAGGAGCCATACCGCGGAAAT CGAAACCTTGCCTGTGCTGATGTCATCTGGTCAATCGGCAAGGCAGGAGATAGACACGAACATACCGAGACATGG GGACCGCTCAATGCGTACATGGAGCCGAAGGTTAAGAAGATTATCGTGTTCGTCAACGAACGTGAGGAAGCCGAT GAGGTCGCTAGTTTCCTGCAATCCAAGGGCATCGATGCTGTCTCGCTATCTCGCGACACCGATTCCCGGAAGCAA CAAGAGACCCTCTCGCAGTTCACAGAGGTTAAGCTTCCACCGACTGCGGAGGAGATCATGATTAATAAGAAGAAG AACCGCGCCGCCGGAAGCATTCCCTTCGAACTTCCTGAGCGCCAAGAGCCCATTCGCCGCCTTCCCGACACAAAG GTTCTTGTCACTACCGATATCGCCTCCCGTGGTATTGATACCCTGGCAGTGAAGACAGTAATTCTCTACCATGTG CCGCACACTACCATCGACTTTATCCACCGACTAGGCCGTCTCGGTCGTATGGGCAAGCGTGGTCGTGGTGTTGTC CTGGTGGGCAAGAAGGACCGTAAGGACGTTGTCCGTGAGGTTCGCGAGGGCATGTTCCGTGGCCAGGCTTTGATC TAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences