© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4169.t1 |
| Gene name | |
| Location | scaffold_08:243677..245803 |
| Strand | - |
| Gene length (bp) | 2126 |
| Transcript length (bp) | 1482 |
| Coding sequence length (bp) | 1482 |
| Protein length (aa) | 494 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.6E-83 | 10 | 455 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.1E-26 | 14 | 399 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 47 | 69 | 22 |
| 3 | 82 | 104 | 22 |
| 4 | 108 | 127 | 19 |
| 5 | 134 | 156 | 22 |
| 6 | 171 | 193 | 22 |
| 7 | 255 | 277 | 22 |
| 8 | 287 | 309 | 22 |
| 9 | 322 | 340 | 18 |
| 10 | 355 | 377 | 22 |
| 11 | 384 | 406 | 22 |
| 12 | 421 | 440 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4169.t1 MAMWYSLGIAFFAAIGTFLFGFDTGIATTTIAHQSWIDYMQKPSNGVTGAVVAVYIAGEAVGALTQTFIGDRLGR IRFMQMMCVIVTIGTIIQTASVNIGMFLAGRVLAGFAVGGLVATVPIYLSEISDPRYRGLIGGISGCGISFGTMM SNWVGYACSYAPYGPIQWRLPLGIQIPWGIIMFIGLSTFMPNSPRQLIRQGKIDLARSEFARIRRGIVLHDMEEE FGLMKAQIEYEMEREMTSLRDIFKLFRHRVLVSIAVQTMTSLTGVNVIQYYQTILYKGLGIGSHTILALAAVYGT IAFLSNSVTTMYMTDQWGRRKMLITGLAGIVLIEIYAAVMQREFQNTDNHIGKGFAILGIYLFVVCYYGMLNSTT WLYGAEVLPIALRSKVMGLAAASHFIVNVGITEAGPSAFANIHENYYYVFVVCSAFFLVIAYFYFPETKQKTLEE VAAAFGDRVVAQDEGPKRALSVVGETQHIESSHVSTHETAKAV* |
| Coding | >Pro_DTO377G3_2|g4169.t1 ATGGCGATGTGGTATTCGCTGGGTATTGCTTTCTTTGCTGCTATAGGCACGTTCTTGTTTGGGTTCGATACTGGT ATTGCCACAACTACGATTGCCCACCAAAGCTGGATTGATTATATGCAAAAGCCATCAAATGGCGTCACAGGAGCT GTTGTGGCCGTGTACATCGCCGGTGAAGCCGTCGGCGCCCTAACACAAACATTCATCGGCGACCGACTCGGTCGA ATCCGCTTCATGCAAATGATGTGCGTGATCGTGACAATCGGCACCATCATCCAAACCGCCTCCGTCAACATCGGC ATGTTCCTCGCCGGCCGTGTGCTAGCCGGGTTCGCAGTAGGTGGCCTGGTTGCAACAGTCCCAATCTACCTGAGT GAAATATCGGATCCAAGATACCGCGGTCTGATCGGCGGTATTTCCGGCTGTGGCATCTCATTCGGAACAATGATG TCGAACTGGGTCGGCTACGCCTGCAGCTACGCTCCCTACGGCCCCATACAATGGCGGCTGCCTCTGGGAATCCAA ATTCCTTGGGGAATTATCATGTTCATTGGTCTTTCGACTTTCATGCCTAACTCGCCGCGACAGCTGATTCGCCAG GGGAAGATTGACCTTGCGCGTAGCGAGTTTGCGCGCATTCGGCGTGGTATTGTGTTGCATGATATGGAGGAGGAG TTTGGGCTTATGAAGGCGCAGATTGAGTATGAGATGGAGAGGGAGATGACTTCTTTGCGGGATATCTTTAAACTT TTCAGACATCGGGTGCTTGTCTCTATCGCTGTGCAGACGATGACGAGTTTGACAGGTGTCAATGTCATTCAGTAT TATCAAACTATTCTGTACAAGGGCCTTGGAATCGGGTCACACACGATCCTCGCTCTGGCTGCAGTCTACGGTACC ATCGCCTTTTTGTCCAATTCGGTCACTACAATGTACATGACCGACCAATGGGGACGTCGGAAGATGCTGATCACC GGATTGGCTGGTATTGTCCTGATCGAAATCTACGCCGCGGTGATGCAGAGAGAGTTCCAGAATACAGACAACCAC ATCGGAAAGGGTTTCGCGATTCTCGGAATTTACCTCTTTGTGGTTTGCTATTATGGCATGCTCAACAGTACTACT TGGCTGTATGGCGCCGAGGTTCTTCCTATTGCTCTCCGCAGCAAGGTGATGGGTCTTGCCGCCGCATCTCATTTT ATCGTTAATGTTGGCATCACCGAAGCTGGACCCAGTGCTTTTGCCAATATCCACGAGAACTACTACTACGTCTTT GTAGTCTGCTCTGCATTCTTCTTGGTGATCGCTTACTTTTACTTCCCGGAAACCAAGCAAAAGACTCTCGAAGAA GTGGCTGCTGCGTTCGGTGACCGGGTTGTGGCTCAGGACGAGGGACCTAAGCGTGCACTTAGTGTGGTTGGCGAG ACACAGCACATTGAATCTAGCCATGTATCGACGCATGAAACAGCAAAGGCAGTCTGA |
| Transcript | >Pro_DTO377G3_2|g4169.t1 ATGGCGATGTGGTATTCGCTGGGTATTGCTTTCTTTGCTGCTATAGGCACGTTCTTGTTTGGGTTCGATACTGGT ATTGCCACAACTACGATTGCCCACCAAAGCTGGATTGATTATATGCAAAAGCCATCAAATGGCGTCACAGGAGCT GTTGTGGCCGTGTACATCGCCGGTGAAGCCGTCGGCGCCCTAACACAAACATTCATCGGCGACCGACTCGGTCGA ATCCGCTTCATGCAAATGATGTGCGTGATCGTGACAATCGGCACCATCATCCAAACCGCCTCCGTCAACATCGGC ATGTTCCTCGCCGGCCGTGTGCTAGCCGGGTTCGCAGTAGGTGGCCTGGTTGCAACAGTCCCAATCTACCTGAGT GAAATATCGGATCCAAGATACCGCGGTCTGATCGGCGGTATTTCCGGCTGTGGCATCTCATTCGGAACAATGATG TCGAACTGGGTCGGCTACGCCTGCAGCTACGCTCCCTACGGCCCCATACAATGGCGGCTGCCTCTGGGAATCCAA ATTCCTTGGGGAATTATCATGTTCATTGGTCTTTCGACTTTCATGCCTAACTCGCCGCGACAGCTGATTCGCCAG GGGAAGATTGACCTTGCGCGTAGCGAGTTTGCGCGCATTCGGCGTGGTATTGTGTTGCATGATATGGAGGAGGAG TTTGGGCTTATGAAGGCGCAGATTGAGTATGAGATGGAGAGGGAGATGACTTCTTTGCGGGATATCTTTAAACTT TTCAGACATCGGGTGCTTGTCTCTATCGCTGTGCAGACGATGACGAGTTTGACAGGTGTCAATGTCATTCAGTAT TATCAAACTATTCTGTACAAGGGCCTTGGAATCGGGTCACACACGATCCTCGCTCTGGCTGCAGTCTACGGTACC ATCGCCTTTTTGTCCAATTCGGTCACTACAATGTACATGACCGACCAATGGGGACGTCGGAAGATGCTGATCACC GGATTGGCTGGTATTGTCCTGATCGAAATCTACGCCGCGGTGATGCAGAGAGAGTTCCAGAATACAGACAACCAC ATCGGAAAGGGTTTCGCGATTCTCGGAATTTACCTCTTTGTGGTTTGCTATTATGGCATGCTCAACAGTACTACT TGGCTGTATGGCGCCGAGGTTCTTCCTATTGCTCTCCGCAGCAAGGTGATGGGTCTTGCCGCCGCATCTCATTTT ATCGTTAATGTTGGCATCACCGAAGCTGGACCCAGTGCTTTTGCCAATATCCACGAGAACTACTACTACGTCTTT GTAGTCTGCTCTGCATTCTTCTTGGTGATCGCTTACTTTTACTTCCCGGAAACCAAGCAAAAGACTCTCGAAGAA GTGGCTGCTGCGTTCGGTGACCGGGTTGTGGCTCAGGACGAGGGACCTAAGCGTGCACTTAGTGTGGTTGGCGAG ACACAGCACATTGAATCTAGCCATGTATCGACGCATGAAACAGCAAAGGCAGTCTGA |
| Gene | >Pro_DTO377G3_2|g4169.t1 ATGGCGATGTGGTATTCGCTGGGTATTGCTTTCTTTGCTGCTATAGGCACGTTCTTGTTTGTAAGTTGATTTCTT CTTCCAAGATCAGTTGGTCTTGGACCGTGTACAACCACGAAGTTGACTTCAATGAATAGGGGTTCGATACTGGTA TTGCCACAACTAGTGAGTTATTATCCACAAATTCTAGCTTTGCAACTCAAACTAAGGATTTACTAGCGATTGCCC ACCAAAGCTGGATTGATTATATGCAAAAGCCATCAAATGGCGTCACAGGAGCTGTATGTTCACCCAGCCATTTAA CCTCCACCCCAACGGAACAGACCCAGAGACTGACCATCTTAGGTTGTGGCCGTGTACATCGCCGGTGAAGCCGTC GGCGCCCTAACACAAACATTCATCGGCGACCGACTCGGTCGAATCCGCTTCATGCAAATGATGTGCGTGATCGTG ACAATCGGCACCATCATCCAAACCGCCTCCGTCAACATCGGCATGTTCCTCGCCGGCCGTGTGCTAGCCGGGTTC GCAGTAGGGTAAGCCACCCATACTCTTCACCAGATCTATAAACGAAATTAACATCCCCCTAAGTGGCCTGGTTGC AACAGTCCCAATCTACCTGAGTGAAATATCGGATCCAAGATACCGCGGTCTGATCGGCGGTATTTCCGGCTGTGG CATCTCATTCGGAACAATGATGTCGAACTGGGTCGGCTACGCCTGCAGCTACGCTCCCTACGGCCCCATACAATG GCGGCTGCCTCTGGGAATCCAAATTCCTTGGGGAATTATCATGTTCATTGGTCTTTCGACTTTCATGCCTAACTC GCCGCGACAGCTGATTCGCCAGGGGAAGATTGACCTTGCGCGTAGCGAGTTTGCGCGCATTCGGCGTGGTATTGT GTTGCATGATATGGAGGAGGAGTTTGGGCTTATGAAGGCGCAGATTGAGTATGAGATGGAGAGGGAGATGACTTC TTTGCGGGATATCTTTAAACTTTTCAGACATCGGGTGCTTGTGTGAGTTTGTTTATTTCTTGTTTGGTTGCATTT GAGATTTCTGGAACTAACTTGGATGTTTAGCTCTATCGCTGTGCAGACGATGACGAGTTTGACAGGTGTCAATGT CATTCAGTATTATCAAAGTGAGTTCAGGGTGTGAGCGCCGAAGCGGGAATTATTGGGATGTTAATATATCTCTCA GCTATTCTGTACAAGGGCCTTGGAATCGGGTCACACACGATCCTCGCTCTGGCTGCAGTCTACGGTACCATCGCC TTTTTGTCCAATTCGGTCACTACAATGTACATGACCGACCAATGGGGACGTCGGAAGTAAGTATATTCCCTGGGT TATCATGTCGCATGCCTGCTGCTAACCGTCTACAGGATGCTGATCACCGGATTGGCTGGTATTGTCCTGATCGAA ATCTACGCCGCGGTGATGCAGAGAGAGTTCCAGAATACAGACAACCACATCGGAAAGGGTTTCGCGATTCTCGGA ATTTACCTCTTTGTGGTTTGCTATTGTAAGGACTCGGACCATGGCTGCAAGAAATTATCTAACGTGGGGGTTTTT CTTCTTCTTAGATGGCATGCTCAACAGTACTACTTGGCTGTATGGCGCCGAGGTTCTTCCTATTGCTCTCCGCAG CAAGGTGATGGGTCTTGCCGCCGCATCTCATTTTATCGTTAATGTTGGCAGTAAGCCTGAAATCTATTCTTGTGA AAGATAGTCTATATATGCAATTGCTAACCTCTTCATCCGAAAATAGTCACCGAAGCTGGACCCAGTGCTTTTGCC AATATCCACGAGAACTACTACTACGTCTTTGTAGTCTGCTCTGCATTCTTCTTGGTGATCGCTTACTTTTACTTC CCGTAAGTCGCTAATATATTTCCCTTCAACTTGTTTCATCGGAGACGAAGAGAAAGAGATCAAAAGAATTTAAGA GGCTAACCTTGTCCAGGGAAACCAAGCAAAAGACTCTCGAAGAAGTGGCTGCTGCGTTCGGTGACCGGGTTGTGG CTCAGGACGAGGGACCTAAGCGTGCACTTAGTGTGGTTGGCGAGACACAGCACATTGAATCTAGCCATGTATCGA CGCATGAAACAGCAAAGGCAGTCTGA |